Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm25371-201ENSMUST00000158162 101 ntBASIC1.5□□□□□ -2.17
Trim3Q9R1R2 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.5□□□□□ -2.17
Trim3Q9R1R2 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.5□□□□□ -2.17
Trim3Q9R1R2 Gm25253-201ENSMUST00000179958 107 ntBASIC1.5□□□□□ -2.17
Trim3Q9R1R2 Gm28453-203ENSMUST00000187041 189 ntBASIC1.5□□□□□ -2.17
Trim3Q9R1R2 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.5□□□□□ -2.17
Trim3Q9R1R2 Gm36891-201ENSMUST00000191995 655 ntBASIC1.5□□□□□ -2.17
Trim3Q9R1R2 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC1.5□□□□□ -2.17
Trim3Q9R1R2 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.5□□□□□ -2.17
Trim3Q9R1R2 Gm10264-201ENSMUST00000220589 429 ntBASIC1.5□□□□□ -2.17
Trim3Q9R1R2 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.5□□□□□ -2.17
Trim3Q9R1R2 Gm24152-201ENSMUST00000082764 163 ntBASIC1.5□□□□□ -2.17
Trim3Q9R1R2 Mir32-201ENSMUST00000083610 70 ntBASIC1.5□□□□□ -2.17
Trim3Q9R1R2 Mir181a-1-201ENSMUST00000083631 87 ntBASIC1.5□□□□□ -2.17
Trim3Q9R1R2 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Trim3Q9R1R2 Gm25541-201ENSMUST00000116888 126 ntBASIC1.49□□□□□ -2.17
Trim3Q9R1R2 Gm22032-201ENSMUST00000116946 116 ntBASIC1.49□□□□□ -2.17
Trim3Q9R1R2 Gm13714-201ENSMUST00000117313 221 ntBASIC1.49□□□□□ -2.17
Trim3Q9R1R2 Gm26181-201ENSMUST00000157687 106 ntBASIC1.49□□□□□ -2.17
Trim3Q9R1R2 Gm22510-201ENSMUST00000179304 79 ntBASIC1.49□□□□□ -2.17
Trim3Q9R1R2 Gm26336-201ENSMUST00000179449 79 ntBASIC1.49□□□□□ -2.17
Trim3Q9R1R2 Gm26390-201ENSMUST00000179628 79 ntBASIC1.49□□□□□ -2.17
Trim3Q9R1R2 Gm17067-202ENSMUST00000180131 123 ntBASIC1.49□□□□□ -2.17
Trim3Q9R1R2 Gm28383-201ENSMUST00000187563 139 ntBASIC1.49□□□□□ -2.17
Trim3Q9R1R2 Gm29262-201ENSMUST00000190084 196 ntBASIC1.49□□□□□ -2.17
Trim3Q9R1R2 Gm35736-201ENSMUST00000203681 313 ntBASIC1.49□□□□□ -2.17
Trim3Q9R1R2 Gm24615-201ENSMUST00000083268 113 ntBASIC1.49□□□□□ -2.17
Trim3Q9R1R2 Gm15526-201ENSMUST00000112504 204 ntBASIC1.48□□□□□ -2.17
Trim3Q9R1R2 Gm9059-201ENSMUST00000118319 183 ntBASIC1.48□□□□□ -2.17
Trim3Q9R1R2 Rnu7-201ENSMUST00000158458 62 ntBASIC1.48□□□□□ -2.17
Trim3Q9R1R2 Gm26405-201ENSMUST00000158495 100 ntBASIC1.48□□□□□ -2.17
Trim3Q9R1R2 Gm22945-201ENSMUST00000158557 157 ntBASIC1.48□□□□□ -2.17
Trim3Q9R1R2 Gm24677-201ENSMUST00000158755 150 ntBASIC1.48□□□□□ -2.17
Trim3Q9R1R2 Gm26200-201ENSMUST00000180273 79 ntBASIC1.48□□□□□ -2.17
Trim3Q9R1R2 Mir7683-201ENSMUST00000183842 61 ntBASIC1.48□□□□□ -2.17
Trim3Q9R1R2 Gm9156-201ENSMUST00000189660 463 ntBASIC1.48□□□□□ -2.17
Trim3Q9R1R2 Gm18433-201ENSMUST00000192747 197 ntBASIC1.48□□□□□ -2.17
Trim3Q9R1R2 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.48□□□□□ -2.17
Trim3Q9R1R2 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
Trim3Q9R1R2 Gm44320-201ENSMUST00000199276 86 ntBASIC1.48□□□□□ -2.17
Trim3Q9R1R2 Gm44408-201ENSMUST00000200205 66 ntBASIC1.48□□□□□ -2.17
Trim3Q9R1R2 Gm44962-201ENSMUST00000206460 279 ntBASIC1.48□□□□□ -2.17
Trim3Q9R1R2 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
Trim3Q9R1R2 Gm5899-201ENSMUST00000071770 270 ntBASIC1.48□□□□□ -2.17
Trim3Q9R1R2 Gm24356-201ENSMUST00000082859 106 ntBASIC1.48□□□□□ -2.17
Trim3Q9R1R2 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.48□□□□□ -2.17
Trim3Q9R1R2 Mir374b-201ENSMUST00000102314 95 ntBASIC1.47□□□□□ -2.17
Trim3Q9R1R2 Gm25992-201ENSMUST00000102437 109 ntBASIC1.47□□□□□ -2.17
Trim3Q9R1R2 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Trim3Q9R1R2 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Trim3Q9R1R2 Mir465b-1-201ENSMUST00000103940 79 ntBASIC1.47□□□□□ -2.17
Trim3Q9R1R2 Mir465b-2-201ENSMUST00000104662 79 ntBASIC1.47□□□□□ -2.17
Trim3Q9R1R2 Gm11420-201ENSMUST00000120047 402 ntBASIC1.47□□□□□ -2.17
Trim3Q9R1R2 Gm14980-201ENSMUST00000121247 736 ntBASIC1.47□□□□□ -2.17
Trim3Q9R1R2 Gm12785-201ENSMUST00000122052 172 ntBASIC1.47□□□□□ -2.17
Trim3Q9R1R2 Gm24632-201ENSMUST00000122770 323 ntBASIC1.47□□□□□ -2.17
Trim3Q9R1R2 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Trim3Q9R1R2 Gm22080-201ENSMUST00000157591 106 ntBASIC1.47□□□□□ -2.17
Trim3Q9R1R2 Gm22556-201ENSMUST00000157803 100 ntBASIC1.47□□□□□ -2.17
Trim3Q9R1R2 Gm22085-201ENSMUST00000158344 110 ntBASIC1.47□□□□□ -2.17
Trim3Q9R1R2 Gm23854-201ENSMUST00000158378 108 ntBASIC1.47□□□□□ -2.17
Trim3Q9R1R2 Gm22075-201ENSMUST00000158599 192 ntBASIC1.47□□□□□ -2.17
Trim3Q9R1R2 Gm24638-201ENSMUST00000179807 132 ntBASIC1.47□□□□□ -2.17
Trim3Q9R1R2 Gm27271-201ENSMUST00000183509 170 ntBASIC1.47□□□□□ -2.17
Trim3Q9R1R2 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.47□□□□□ -2.17
Trim3Q9R1R2 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC1.47□□□□□ -2.17
Trim3Q9R1R2 Mir7661-201ENSMUST00000197023 61 ntBASIC1.47□□□□□ -2.17
Trim3Q9R1R2 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.47□□□□□ -2.17
Trim3Q9R1R2 Gm43035-201ENSMUST00000197626 517 ntBASIC1.47□□□□□ -2.17
Trim3Q9R1R2 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.47□□□□□ -2.17
Trim3Q9R1R2 Gm13992-201ENSMUST00000120558 156 ntBASIC1.46□□□□□ -2.18
Trim3Q9R1R2 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.46□□□□□ -2.18
Trim3Q9R1R2 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.46□□□□□ -2.18
Trim3Q9R1R2 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Trim3Q9R1R2 Gm22099-201ENSMUST00000157925 123 ntBASIC1.46□□□□□ -2.18
Trim3Q9R1R2 Gm22963-201ENSMUST00000157960 91 ntBASIC1.46□□□□□ -2.18
Trim3Q9R1R2 Gm24851-201ENSMUST00000158028 103 ntBASIC1.46□□□□□ -2.18
Trim3Q9R1R2 Gm24174-201ENSMUST00000158933 111 ntBASIC1.46□□□□□ -2.18
Trim3Q9R1R2 Gm17052-201ENSMUST00000165496 289 ntBASIC1.46□□□□□ -2.18
Trim3Q9R1R2 Gm23289-201ENSMUST00000175615 108 ntBASIC1.46□□□□□ -2.18
Trim3Q9R1R2 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC1.46□□□□□ -2.18
Trim3Q9R1R2 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
Trim3Q9R1R2 Gm28408-201ENSMUST00000191557 463 ntBASIC1.46□□□□□ -2.18
Trim3Q9R1R2 Gm20144-201ENSMUST00000203031 165 ntBASIC1.46□□□□□ -2.18
Trim3Q9R1R2 Gm46997-201ENSMUST00000222108 217 ntBASIC1.46□□□□□ -2.18
Trim3Q9R1R2 AC173345.2-201ENSMUST00000222795 153 ntBASIC1.46□□□□□ -2.18
Trim3Q9R1R2 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.46□□□□□ -2.18
Trim3Q9R1R2 AC183092.1-201ENSMUST00000224301 153 ntBASIC1.46□□□□□ -2.18
Trim3Q9R1R2 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.46□□□□□ -2.18
Trim3Q9R1R2 Snord42a-201ENSMUST00000082606 65 ntBASIC1.46□□□□□ -2.18
Trim3Q9R1R2 Gm26329-201ENSMUST00000093723 110 ntBASIC1.46□□□□□ -2.18
Trim3Q9R1R2 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.45□□□□□ -2.18
Trim3Q9R1R2 AC154515.1-201ENSMUST00000226085 2841 ntBASIC1.45□□□□□ -2.18
Trim3Q9R1R2 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.45□□□□□ -2.18
Trim3Q9R1R2 Mir301b-201ENSMUST00000102333 97 ntBASIC1.45□□□□□ -2.18
Trim3Q9R1R2 Gm15115-201ENSMUST00000121145 264 ntBASIC1.45□□□□□ -2.18
Trim3Q9R1R2 Gm22281-201ENSMUST00000157198 103 ntBASIC1.45□□□□□ -2.18
Trim3Q9R1R2 Gm26150-201ENSMUST00000157426 151 ntBASIC1.45□□□□□ -2.18
Trim3Q9R1R2 Mir3057-201ENSMUST00000175040 91 ntBASIC1.45□□□□□ -2.18
Trim3Q9R1R2 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 132.2 ms