Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
Prpf40aQ9R1C7 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
Prpf40aQ9R1C7 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Prpf40aQ9R1C7 Gm23015-201ENSMUST00000104145 128 ntBASIC3.65□□□□□ -1.83
Prpf40aQ9R1C7 Snord11-201ENSMUST00000158468 84 ntBASIC3.65□□□□□ -1.83
Prpf40aQ9R1C7 Gm25488-201ENSMUST00000158728 118 ntBASIC3.65□□□□□ -1.83
Prpf40aQ9R1C7 Gm25835-201ENSMUST00000158917 144 ntBASIC3.65□□□□□ -1.83
Prpf40aQ9R1C7 Gm5224-201ENSMUST00000183060 350 ntBASIC3.65□□□□□ -1.83
Prpf40aQ9R1C7 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.65□□□□□ -1.83
Prpf40aQ9R1C7 Igkv8-31-201ENSMUST00000200040 372 ntBASIC3.65□□□□□ -1.83
Prpf40aQ9R1C7 Gm19563-201ENSMUST00000222031 270 ntBASIC3.65□□□□□ -1.83
Prpf40aQ9R1C7 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.65□□□□□ -1.83
Prpf40aQ9R1C7 AC149294.9-201ENSMUST00000227256 164 ntBASIC3.65□□□□□ -1.83
Prpf40aQ9R1C7 Gm24147-201ENSMUST00000082763 144 ntBASIC3.65□□□□□ -1.83
Prpf40aQ9R1C7 Gm24615-201ENSMUST00000083268 113 ntBASIC3.65□□□□□ -1.83
Prpf40aQ9R1C7 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Prpf40aQ9R1C7 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Prpf40aQ9R1C7 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Prpf40aQ9R1C7 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.64□□□□□ -1.83
Prpf40aQ9R1C7 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Prpf40aQ9R1C7 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Prpf40aQ9R1C7 Gm23197-201ENSMUST00000158809 112 ntBASIC3.64□□□□□ -1.83
Prpf40aQ9R1C7 Gm26157-201ENSMUST00000158974 126 ntBASIC3.64□□□□□ -1.83
Prpf40aQ9R1C7 Gm20438-201ENSMUST00000174441 329 ntBASIC3.64□□□□□ -1.83
Prpf40aQ9R1C7 Gm27698-201ENSMUST00000184060 249 ntBASIC3.64□□□□□ -1.83
Prpf40aQ9R1C7 Gm37428-201ENSMUST00000193886 137 ntBASIC3.64□□□□□ -1.83
Prpf40aQ9R1C7 Gm44482-201ENSMUST00000199232 103 ntBASIC3.64□□□□□ -1.83
Prpf40aQ9R1C7 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.64□□□□□ -1.83
Prpf40aQ9R1C7 Gm44824-201ENSMUST00000207021 229 ntBASIC3.64□□□□□ -1.83
Prpf40aQ9R1C7 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.64□□□□□ -1.83
Prpf40aQ9R1C7 AC122465.2-201ENSMUST00000221774 354 ntBASIC3.64□□□□□ -1.83
Prpf40aQ9R1C7 AC115735.1-201ENSMUST00000226633 350 ntBASIC3.64□□□□□ -1.83
Prpf40aQ9R1C7 Gm8508-201ENSMUST00000061226 363 ntBASIC3.64□□□□□ -1.83
Prpf40aQ9R1C7 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Prpf40aQ9R1C7 Snora7a-201ENSMUST00000082629 140 ntBASIC3.64□□□□□ -1.83
Prpf40aQ9R1C7 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Prpf40aQ9R1C7 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Prpf40aQ9R1C7 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Prpf40aQ9R1C7 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Prpf40aQ9R1C7 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Prpf40aQ9R1C7 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.63□□□□□ -1.83
Prpf40aQ9R1C7 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Prpf40aQ9R1C7 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.63□□□□□ -1.83
Prpf40aQ9R1C7 Gm12513-201ENSMUST00000118617 352 ntBASIC3.63□□□□□ -1.83
Prpf40aQ9R1C7 Gm23326-201ENSMUST00000157419 105 ntBASIC3.63□□□□□ -1.83
Prpf40aQ9R1C7 Gm27934-201ENSMUST00000158795 63 ntBASIC3.63□□□□□ -1.83
Prpf40aQ9R1C7 Gm24510-201ENSMUST00000174965 94 ntBASIC3.63□□□□□ -1.83
Prpf40aQ9R1C7 Gm24813-201ENSMUST00000175310 84 ntBASIC3.63□□□□□ -1.83
Prpf40aQ9R1C7 Gm22910-201ENSMUST00000178568 132 ntBASIC3.63□□□□□ -1.83
Prpf40aQ9R1C7 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC3.63□□□□□ -1.83
Prpf40aQ9R1C7 Gm43264-201ENSMUST00000202284 325 ntBASIC3.63□□□□□ -1.83
Prpf40aQ9R1C7 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Prpf40aQ9R1C7 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.63□□□□□ -1.83
Prpf40aQ9R1C7 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC3.62□□□□□ -1.83
Prpf40aQ9R1C7 Mir6408-201ENSMUST00000183643 91 ntBASIC3.62□□□□□ -1.83
Prpf40aQ9R1C7 Gm38298-201ENSMUST00000193578 118 ntBASIC3.62□□□□□ -1.83
Prpf40aQ9R1C7 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Prpf40aQ9R1C7 CT025538.3-201ENSMUST00000225279 3848 ntBASIC3.62□□□□□ -1.83
Prpf40aQ9R1C7 mt-Tt-201ENSMUST00000082422 67 ntBASIC3.62□□□□□ -1.83
Prpf40aQ9R1C7 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Prpf40aQ9R1C7 Gm45461-201ENSMUST00000211726 4535 ntBASIC3.62□□□□□ -1.83
Prpf40aQ9R1C7 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
Prpf40aQ9R1C7 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Prpf40aQ9R1C7 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Prpf40aQ9R1C7 Gm24936-201ENSMUST00000122598 247 ntBASIC3.61□□□□□ -1.83
Prpf40aQ9R1C7 Gm23716-201ENSMUST00000157348 144 ntBASIC3.61□□□□□ -1.83
Prpf40aQ9R1C7 Gm27648-201ENSMUST00000184315 107 ntBASIC3.61□□□□□ -1.83
Prpf40aQ9R1C7 Gm29452-201ENSMUST00000187996 313 ntBASIC3.61□□□□□ -1.83
Prpf40aQ9R1C7 Gm18433-202ENSMUST00000195682 196 ntBASIC3.61□□□□□ -1.83
Prpf40aQ9R1C7 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.61□□□□□ -1.83
Prpf40aQ9R1C7 AF357341-201ENSMUST00000083088 75 ntBASIC3.61□□□□□ -1.83
Prpf40aQ9R1C7 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC3.61□□□□□ -1.83
Prpf40aQ9R1C7 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Prpf40aQ9R1C7 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Prpf40aQ9R1C7 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Prpf40aQ9R1C7 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Prpf40aQ9R1C7 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Prpf40aQ9R1C7 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.6□□□□□ -1.83
Prpf40aQ9R1C7 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Prpf40aQ9R1C7 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Prpf40aQ9R1C7 n-R5s158-201ENSMUST00000104095 118 ntBASIC3.6□□□□□ -1.83
Prpf40aQ9R1C7 Gm26005-201ENSMUST00000158802 134 ntBASIC3.6□□□□□ -1.83
Prpf40aQ9R1C7 Gm24390-201ENSMUST00000179578 62 ntBASIC3.6□□□□□ -1.83
Prpf40aQ9R1C7 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Prpf40aQ9R1C7 Gm39147-201ENSMUST00000211376 465 ntBASIC3.6□□□□□ -1.83
Prpf40aQ9R1C7 AC120540.2-201ENSMUST00000221716 387 ntBASIC3.6□□□□□ -1.83
Prpf40aQ9R1C7 Snord61-201ENSMUST00000083176 71 ntBASIC3.6□□□□□ -1.83
Prpf40aQ9R1C7 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.6□□□□□ -1.83
Prpf40aQ9R1C7 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Prpf40aQ9R1C7 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.59□□□□□ -1.83
Prpf40aQ9R1C7 Gm25089-201ENSMUST00000102015 79 ntBASIC3.59□□□□□ -1.83
Prpf40aQ9R1C7 Gm25764-201ENSMUST00000104092 134 ntBASIC3.59□□□□□ -1.83
Prpf40aQ9R1C7 Snord100-201ENSMUST00000116836 74 ntBASIC3.59□□□□□ -1.83
Prpf40aQ9R1C7 Gm15733-201ENSMUST00000132957 242 ntBASIC3.59□□□□□ -1.83
Prpf40aQ9R1C7 Gm26100-201ENSMUST00000157245 127 ntBASIC3.59□□□□□ -1.83
Prpf40aQ9R1C7 Gm17117-201ENSMUST00000163665 299 ntBASIC3.59□□□□□ -1.83
Prpf40aQ9R1C7 Gm25840-201ENSMUST00000177821 79 ntBASIC3.59□□□□□ -1.83
Prpf40aQ9R1C7 Gm24952-201ENSMUST00000177909 79 ntBASIC3.59□□□□□ -1.83
Prpf40aQ9R1C7 Gm23682-201ENSMUST00000178146 79 ntBASIC3.59□□□□□ -1.83
Prpf40aQ9R1C7 Gm24652-201ENSMUST00000178223 79 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms