Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm36946-201ENSMUST00000192706 435 ntBASIC-0.56□□□□□ -2.5
Scn11aQ9R053 Gm45673-201ENSMUST00000210293 358 ntBASIC-0.56□□□□□ -2.5
Scn11aQ9R053 AC069561.3-201ENSMUST00000217321 114 ntBASIC-0.56□□□□□ -2.5
Scn11aQ9R053 Gm46997-201ENSMUST00000222108 217 ntBASIC-0.56□□□□□ -2.5
Scn11aQ9R053 Gm24616-201ENSMUST00000083274 139 ntBASIC-0.56□□□□□ -2.5
Scn11aQ9R053 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC-0.56□□□□□ -2.5
Scn11aQ9R053 Gm25557-201ENSMUST00000158084 315 ntBASIC-0.57□□□□□ -2.5
Scn11aQ9R053 Gm22611-201ENSMUST00000158288 150 ntBASIC-0.57□□□□□ -2.5
Scn11aQ9R053 AC167669.4-201ENSMUST00000225967 140 ntBASIC-0.57□□□□□ -2.5
Scn11aQ9R053 Gm22809-201ENSMUST00000082743 156 ntBASIC-0.57□□□□□ -2.5
Scn11aQ9R053 Mir29b-2-201ENSMUST00000083478 81 ntBASIC-0.57□□□□□ -2.5
Scn11aQ9R053 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC-0.57□□□□□ -2.5
Scn11aQ9R053 Mir145b-201ENSMUST00000184434 75 ntBASIC-0.57□□□□□ -2.5
Scn11aQ9R053 Gm23452-201ENSMUST00000083327 107 ntBASIC-0.57□□□□□ -2.5
Scn11aQ9R053 Mir500-201ENSMUST00000093600 92 ntBASIC-0.57□□□□□ -2.5
Scn11aQ9R053 Gm15289-201ENSMUST00000117793 244 ntBASIC-0.58□□□□□ -2.5
Scn11aQ9R053 Gm14716-201ENSMUST00000120138 718 ntBASIC-0.58□□□□□ -2.5
Scn11aQ9R053 Gm24896-201ENSMUST00000122741 135 ntBASIC-0.58□□□□□ -2.5
Scn11aQ9R053 Gm28412-201ENSMUST00000187243 177 ntBASIC-0.58□□□□□ -2.5
Scn11aQ9R053 Gm37715-201ENSMUST00000193206 235 ntBASIC-0.58□□□□□ -2.5
Scn11aQ9R053 AC152979.4-201ENSMUST00000219893 379 ntBASIC-0.58□□□□□ -2.5
Scn11aQ9R053 AC158606.1-201ENSMUST00000220078 325 ntBASIC-0.58□□□□□ -2.5
Scn11aQ9R053 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC-0.58□□□□□ -2.5
Scn11aQ9R053 Gm23975-201ENSMUST00000082685 106 ntBASIC-0.58□□□□□ -2.5
Scn11aQ9R053 Gm22972-201ENSMUST00000083297 131 ntBASIC-0.58□□□□□ -2.5
Scn11aQ9R053 Gm16032-201ENSMUST00000118534 168 ntBASIC-0.59□□□□□ -2.5
Scn11aQ9R053 Gm12044-201ENSMUST00000120335 213 ntBASIC-0.59□□□□□ -2.5
Scn11aQ9R053 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.59□□□□□ -2.5
Scn11aQ9R053 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.59□□□□□ -2.5
Scn11aQ9R053 Gm24264-201ENSMUST00000179835 94 ntBASIC-0.59□□□□□ -2.5
Scn11aQ9R053 Gm37128-201ENSMUST00000192599 232 ntBASIC-0.59□□□□□ -2.5
Scn11aQ9R053 Gm44857-201ENSMUST00000208331 196 ntBASIC-0.59□□□□□ -2.5
Scn11aQ9R053 Mir200a-201ENSMUST00000083466 90 ntBASIC-0.59□□□□□ -2.5
Scn11aQ9R053 Gm25896-201ENSMUST00000083713 136 ntBASIC-0.59□□□□□ -2.5
Scn11aQ9R053 Gm11792-201ENSMUST00000120640 168 ntBASIC-0.6□□□□□ -2.5
Scn11aQ9R053 Gm23441-201ENSMUST00000157268 127 ntBASIC-0.6□□□□□ -2.5
Scn11aQ9R053 Gm23317-201ENSMUST00000157999 129 ntBASIC-0.6□□□□□ -2.5
Scn11aQ9R053 Gm24390-201ENSMUST00000179578 62 ntBASIC-0.6□□□□□ -2.5
Scn11aQ9R053 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC-0.6□□□□□ -2.5
Scn11aQ9R053 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.6□□□□□ -2.5
Scn11aQ9R053 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC-0.6□□□□□ -2.5
Scn11aQ9R053 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC-0.6□□□□□ -2.51
Scn11aQ9R053 Gm12433-201ENSMUST00000119659 255 ntBASIC-0.6□□□□□ -2.51
Scn11aQ9R053 Gm26371-201ENSMUST00000157829 104 ntBASIC-0.6□□□□□ -2.51
Scn11aQ9R053 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC-0.6□□□□□ -2.51
Scn11aQ9R053 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC-0.6□□□□□ -2.51
Scn11aQ9R053 Gm44469-201ENSMUST00000198558 79 ntBASIC-0.6□□□□□ -2.51
Scn11aQ9R053 Gm5010-201ENSMUST00000213131 260 ntBASIC-0.6□□□□□ -2.51
Scn11aQ9R053 AC173482.4-201ENSMUST00000225096 348 ntBASIC-0.6□□□□□ -2.51
Scn11aQ9R053 Mir30a-201ENSMUST00000083471 71 ntBASIC-0.6□□□□□ -2.51
Scn11aQ9R053 Gm22595-201ENSMUST00000104250 130 ntBASIC-0.61□□□□□ -2.51
Scn11aQ9R053 Gm13080-201ENSMUST00000120556 420 ntBASIC-0.61□□□□□ -2.51
Scn11aQ9R053 Gm20415-201ENSMUST00000172877 423 ntBASIC-0.61□□□□□ -2.51
Scn11aQ9R053 Igkv13-82-201ENSMUST00000200308 346 ntBASIC-0.61□□□□□ -2.51
Scn11aQ9R053 Gm44954-201ENSMUST00000208513 227 ntBASIC-0.61□□□□□ -2.51
Scn11aQ9R053 Gm23509-201ENSMUST00000083080 160 ntBASIC-0.61□□□□□ -2.51
Scn11aQ9R053 Gm24172-201ENSMUST00000104127 117 ntBASIC-0.62□□□□□ -2.51
Scn11aQ9R053 Gm22496-201ENSMUST00000104493 88 ntBASIC-0.62□□□□□ -2.51
Scn11aQ9R053 Gm24345-201ENSMUST00000158706 124 ntBASIC-0.62□□□□□ -2.51
Scn11aQ9R053 Gm25175-201ENSMUST00000178712 79 ntBASIC-0.62□□□□□ -2.51
Scn11aQ9R053 Mir7043-201ENSMUST00000184219 70 ntBASIC-0.62□□□□□ -2.51
Scn11aQ9R053 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC-0.62□□□□□ -2.51
Scn11aQ9R053 Gm37709-201ENSMUST00000195074 600 ntBASIC-0.62□□□□□ -2.51
Scn11aQ9R053 Mir468-201ENSMUST00000197332 78 ntBASIC-0.62□□□□□ -2.51
Scn11aQ9R053 Gm44404-201ENSMUST00000203979 636 ntBASIC-0.62□□□□□ -2.51
Scn11aQ9R053 Gm23431-201ENSMUST00000104006 107 ntBASIC-0.62□□□□□ -2.51
Scn11aQ9R053 Gm14677-201ENSMUST00000117866 486 ntBASIC-0.62□□□□□ -2.51
Scn11aQ9R053 Gm23387-201ENSMUST00000158586 107 ntBASIC-0.62□□□□□ -2.51
Scn11aQ9R053 Gm17377-201ENSMUST00000165184 207 ntBASIC-0.62□□□□□ -2.51
Scn11aQ9R053 Gm26238-201ENSMUST00000175538 117 ntBASIC-0.62□□□□□ -2.51
Scn11aQ9R053 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC-0.62□□□□□ -2.51
Scn11aQ9R053 Gm27421-201ENSMUST00000184729 167 ntBASIC-0.62□□□□□ -2.51
Scn11aQ9R053 Gm21673-201ENSMUST00000186640 436 ntBASIC-0.62□□□□□ -2.51
Scn11aQ9R053 Gm21135-201ENSMUST00000189023 436 ntBASIC-0.62□□□□□ -2.51
Scn11aQ9R053 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC-0.62□□□□□ -2.51
Scn11aQ9R053 Gm44988-201ENSMUST00000203835 1161 ntBASIC-0.62□□□□□ -2.51
Scn11aQ9R053 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC-0.62□□□□□ -2.51
Scn11aQ9R053 Gm22884-201ENSMUST00000083127 140 ntBASIC-0.62□□□□□ -2.51
Scn11aQ9R053 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC-0.62□□□□□ -2.51
Scn11aQ9R053 Gm23586-201ENSMUST00000157657 123 ntBASIC-0.63□□□□□ -2.51
Scn11aQ9R053 Gm23589-201ENSMUST00000157660 105 ntBASIC-0.63□□□□□ -2.51
Scn11aQ9R053 Gm24015-201ENSMUST00000157725 232 ntBASIC-0.63□□□□□ -2.51
Scn11aQ9R053 Gm18396-201ENSMUST00000177095 361 ntBASIC-0.63□□□□□ -2.51
Scn11aQ9R053 Gm26189-201ENSMUST00000179879 107 ntBASIC-0.63□□□□□ -2.51
Scn11aQ9R053 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC-0.63□□□□□ -2.51
Scn11aQ9R053 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC-0.63□□□□□ -2.51
Scn11aQ9R053 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC-0.63□□□□□ -2.51
Scn11aQ9R053 Gm26265-202ENSMUST00000196326 133 ntBASIC-0.63□□□□□ -2.51
Scn11aQ9R053 AC138667.2-201ENSMUST00000224880 598 ntBASIC-0.63□□□□□ -2.51
Scn11aQ9R053 Gm12225-201ENSMUST00000117995 298 ntBASIC-0.64□□□□□ -2.51
Scn11aQ9R053 Gm11334-201ENSMUST00000121969 156 ntBASIC-0.64□□□□□ -2.51
Scn11aQ9R053 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC-0.64□□□□□ -2.51
Scn11aQ9R053 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC-0.64□□□□□ -2.51
Scn11aQ9R053 AL645546.2-201ENSMUST00000224526 265 ntBASIC-0.64□□□□□ -2.51
Scn11aQ9R053 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.65□□□□□ -2.51
Scn11aQ9R053 Gm27861-201ENSMUST00000183920 214 ntBASIC-0.65□□□□□ -2.51
Scn11aQ9R053 Gm27365-201ENSMUST00000184041 177 ntBASIC-0.65□□□□□ -2.51
Scn11aQ9R053 AC125167.1-201ENSMUST00000198698 141 ntBASIC-0.65□□□□□ -2.51
Scn11aQ9R053 Gm22452-201ENSMUST00000122804 104 ntBASIC-0.65□□□□□ -2.51
Scn11aQ9R053 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC-0.65□□□□□ -2.51
Retrieved 100 of 76,532 protein–RNA pairs in 150 ms