Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.93□□□□□ -2.1
Cpsf3Q9QXK7 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC1.93□□□□□ -2.1
Cpsf3Q9QXK7 Mir3086-201ENSMUST00000175072 87 ntBASIC1.93□□□□□ -2.1
Cpsf3Q9QXK7 Gm17067-202ENSMUST00000180131 123 ntBASIC1.93□□□□□ -2.1
Cpsf3Q9QXK7 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.93□□□□□ -2.1
Cpsf3Q9QXK7 Mir6995-201ENSMUST00000183658 71 ntBASIC1.93□□□□□ -2.1
Cpsf3Q9QXK7 Gm28008-201ENSMUST00000184021 186 ntBASIC1.93□□□□□ -2.1
Cpsf3Q9QXK7 Gm44858-201ENSMUST00000207360 154 ntBASIC1.93□□□□□ -2.1
Cpsf3Q9QXK7 Gm24151-201ENSMUST00000082758 141 ntBASIC1.93□□□□□ -2.1
Cpsf3Q9QXK7 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Cpsf3Q9QXK7 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
Cpsf3Q9QXK7 Gm11862-201ENSMUST00000119678 659 ntBASIC1.92□□□□□ -2.1
Cpsf3Q9QXK7 Gm14761-201ENSMUST00000121363 262 ntBASIC1.92□□□□□ -2.1
Cpsf3Q9QXK7 Gm24630-201ENSMUST00000122768 106 ntBASIC1.92□□□□□ -2.1
Cpsf3Q9QXK7 Mir1936-201ENSMUST00000158699 93 ntBASIC1.92□□□□□ -2.1
Cpsf3Q9QXK7 Gm25836-201ENSMUST00000158918 123 ntBASIC1.92□□□□□ -2.1
Cpsf3Q9QXK7 Gm20438-201ENSMUST00000174441 329 ntBASIC1.92□□□□□ -2.1
Cpsf3Q9QXK7 Mir6352-201ENSMUST00000184495 116 ntBASIC1.92□□□□□ -2.1
Cpsf3Q9QXK7 Gm18357-201ENSMUST00000188184 580 ntBASIC1.92□□□□□ -2.1
Cpsf3Q9QXK7 Gm37579-201ENSMUST00000194291 142 ntBASIC1.92□□□□□ -2.1
Cpsf3Q9QXK7 Gm42960-201ENSMUST00000202160 241 ntBASIC1.92□□□□□ -2.1
Cpsf3Q9QXK7 Gm45654-201ENSMUST00000210980 123 ntBASIC1.92□□□□□ -2.1
Cpsf3Q9QXK7 Gm25078-201ENSMUST00000082530 107 ntBASIC1.92□□□□□ -2.1
Cpsf3Q9QXK7 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.91□□□□□ -2.1
Cpsf3Q9QXK7 Gm12417-201ENSMUST00000119153 403 ntBASIC1.91□□□□□ -2.1
Cpsf3Q9QXK7 Gm12924-201ENSMUST00000121747 318 ntBASIC1.91□□□□□ -2.1
Cpsf3Q9QXK7 Gm24394-201ENSMUST00000158141 123 ntBASIC1.91□□□□□ -2.1
Cpsf3Q9QXK7 Gm23181-201ENSMUST00000158685 110 ntBASIC1.91□□□□□ -2.1
Cpsf3Q9QXK7 Gm16162-201ENSMUST00000162296 297 ntBASIC1.91□□□□□ -2.1
Cpsf3Q9QXK7 Gm24656-201ENSMUST00000177548 132 ntBASIC1.91□□□□□ -2.1
Cpsf3Q9QXK7 Gm18546-201ENSMUST00000197245 676 ntBASIC1.91□□□□□ -2.1
Cpsf3Q9QXK7 Gm20144-201ENSMUST00000203031 165 ntBASIC1.91□□□□□ -2.1
Cpsf3Q9QXK7 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cpsf3Q9QXK7 Gm5899-201ENSMUST00000071770 270 ntBASIC1.91□□□□□ -2.1
Cpsf3Q9QXK7 Gm26922-201ENSMUST00000082687 72 ntBASIC1.91□□□□□ -2.1
Cpsf3Q9QXK7 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Cpsf3Q9QXK7 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.91□□□□□ -2.1
Cpsf3Q9QXK7 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.91□□□□□ -2.1
Cpsf3Q9QXK7 Gm15102-201ENSMUST00000118740 1502 ntBASIC1.91□□□□□ -2.1
Cpsf3Q9QXK7 Gm15101-201ENSMUST00000178818 1502 ntBASIC1.91□□□□□ -2.1
Cpsf3Q9QXK7 AC160115.1-201ENSMUST00000224678 1574 ntBASIC1.9□□□□□ -2.1
Cpsf3Q9QXK7 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Cpsf3Q9QXK7 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.9□□□□□ -2.11
Cpsf3Q9QXK7 Gm9059-201ENSMUST00000118319 183 ntBASIC1.9□□□□□ -2.11
Cpsf3Q9QXK7 Gm22479-201ENSMUST00000122566 81 ntBASIC1.9□□□□□ -2.11
Cpsf3Q9QXK7 Gm23474-201ENSMUST00000158884 75 ntBASIC1.9□□□□□ -2.11
Cpsf3Q9QXK7 Gm26864-201ENSMUST00000181346 156 ntBASIC1.9□□□□□ -2.11
Cpsf3Q9QXK7 Mir7014-201ENSMUST00000183853 63 ntBASIC1.9□□□□□ -2.11
Cpsf3Q9QXK7 Mir7017-201ENSMUST00000184894 62 ntBASIC1.9□□□□□ -2.11
Cpsf3Q9QXK7 Mir3961-201ENSMUST00000198795 59 ntBASIC1.9□□□□□ -2.11
Cpsf3Q9QXK7 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC1.9□□□□□ -2.11
Cpsf3Q9QXK7 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC1.9□□□□□ -2.11
Cpsf3Q9QXK7 Gm24355-201ENSMUST00000082858 122 ntBASIC1.9□□□□□ -2.11
Cpsf3Q9QXK7 Gm26107-201ENSMUST00000083972 107 ntBASIC1.9□□□□□ -2.11
Cpsf3Q9QXK7 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Cpsf3Q9QXK7 Gm23015-201ENSMUST00000104145 128 ntBASIC1.89□□□□□ -2.11
Cpsf3Q9QXK7 Gm23010-201ENSMUST00000104151 126 ntBASIC1.89□□□□□ -2.11
Cpsf3Q9QXK7 Gm24629-201ENSMUST00000122762 89 ntBASIC1.89□□□□□ -2.11
Cpsf3Q9QXK7 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Cpsf3Q9QXK7 Gm25051-201ENSMUST00000158602 249 ntBASIC1.89□□□□□ -2.11
Cpsf3Q9QXK7 Gm23090-201ENSMUST00000177331 78 ntBASIC1.89□□□□□ -2.11
Cpsf3Q9QXK7 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Cpsf3Q9QXK7 Gm25450-201ENSMUST00000179144 107 ntBASIC1.89□□□□□ -2.11
Cpsf3Q9QXK7 Gm24390-201ENSMUST00000179578 62 ntBASIC1.89□□□□□ -2.11
Cpsf3Q9QXK7 Mir376a-201ENSMUST00000197584 68 ntBASIC1.89□□□□□ -2.11
Cpsf3Q9QXK7 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.89□□□□□ -2.11
Cpsf3Q9QXK7 Gm45296-201ENSMUST00000209625 205 ntBASIC1.89□□□□□ -2.11
Cpsf3Q9QXK7 AC145736.2-201ENSMUST00000216305 365 ntBASIC1.89□□□□□ -2.11
Cpsf3Q9QXK7 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.89□□□□□ -2.11
Cpsf3Q9QXK7 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.89□□□□□ -2.11
Cpsf3Q9QXK7 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
Cpsf3Q9QXK7 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Cpsf3Q9QXK7 Mir669l-201ENSMUST00000103771 98 ntBASIC1.88□□□□□ -2.11
Cpsf3Q9QXK7 Mir669i-201ENSMUST00000117007 127 ntBASIC1.88□□□□□ -2.11
Cpsf3Q9QXK7 Gm22221-201ENSMUST00000157362 103 ntBASIC1.88□□□□□ -2.11
Cpsf3Q9QXK7 Gm24783-201ENSMUST00000157639 100 ntBASIC1.88□□□□□ -2.11
Cpsf3Q9QXK7 Mir5624-201ENSMUST00000176635 61 ntBASIC1.88□□□□□ -2.11
Cpsf3Q9QXK7 Gm25253-201ENSMUST00000179958 107 ntBASIC1.88□□□□□ -2.11
Cpsf3Q9QXK7 Gm27793-201ENSMUST00000183405 76 ntBASIC1.88□□□□□ -2.11
Cpsf3Q9QXK7 Gm29512-201ENSMUST00000185544 315 ntBASIC1.88□□□□□ -2.11
Cpsf3Q9QXK7 Gm28110-201ENSMUST00000185782 315 ntBASIC1.88□□□□□ -2.11
Cpsf3Q9QXK7 Gm29057-201ENSMUST00000186468 315 ntBASIC1.88□□□□□ -2.11
Cpsf3Q9QXK7 Gm29661-201ENSMUST00000186781 315 ntBASIC1.88□□□□□ -2.11
Cpsf3Q9QXK7 Gm28737-201ENSMUST00000186808 315 ntBASIC1.88□□□□□ -2.11
Cpsf3Q9QXK7 Gm29147-201ENSMUST00000186846 315 ntBASIC1.88□□□□□ -2.11
Cpsf3Q9QXK7 Gm29118-201ENSMUST00000186908 315 ntBASIC1.88□□□□□ -2.11
Cpsf3Q9QXK7 Gm28433-201ENSMUST00000187085 315 ntBASIC1.88□□□□□ -2.11
Cpsf3Q9QXK7 Gm29227-201ENSMUST00000187139 315 ntBASIC1.88□□□□□ -2.11
Cpsf3Q9QXK7 Gm28759-201ENSMUST00000187621 315 ntBASIC1.88□□□□□ -2.11
Cpsf3Q9QXK7 Gm28831-201ENSMUST00000187739 315 ntBASIC1.88□□□□□ -2.11
Cpsf3Q9QXK7 Gm28200-201ENSMUST00000187778 315 ntBASIC1.88□□□□□ -2.11
Cpsf3Q9QXK7 Gm29034-201ENSMUST00000188099 315 ntBASIC1.88□□□□□ -2.11
Cpsf3Q9QXK7 Gm28752-201ENSMUST00000188340 315 ntBASIC1.88□□□□□ -2.11
Cpsf3Q9QXK7 Gm29378-201ENSMUST00000188723 315 ntBASIC1.88□□□□□ -2.11
Cpsf3Q9QXK7 Gm28569-201ENSMUST00000188748 315 ntBASIC1.88□□□□□ -2.11
Cpsf3Q9QXK7 Gm28120-201ENSMUST00000188812 315 ntBASIC1.88□□□□□ -2.11
Cpsf3Q9QXK7 Gm28369-201ENSMUST00000188993 315 ntBASIC1.88□□□□□ -2.11
Cpsf3Q9QXK7 Gm29037-201ENSMUST00000189092 313 ntBASIC1.88□□□□□ -2.11
Cpsf3Q9QXK7 Gm28909-201ENSMUST00000189406 315 ntBASIC1.88□□□□□ -2.11
Cpsf3Q9QXK7 Gm28861-201ENSMUST00000189681 315 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 159 ms