Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Snora41-201ENSMUST00000082668 132 ntBASIC1□□□□□ -2.25
Trem1Q9JKE2 Gm22306-201ENSMUST00000082692 107 ntBASIC1□□□□□ -2.25
Trem1Q9JKE2 Gm24356-201ENSMUST00000082859 106 ntBASIC1□□□□□ -2.25
Trem1Q9JKE2 Gm23097-201ENSMUST00000083448 105 ntBASIC1□□□□□ -2.25
Trem1Q9JKE2 Gm15102-201ENSMUST00000118740 1502 ntBASIC0.99□□□□□ -2.25
Trem1Q9JKE2 Gm15101-201ENSMUST00000178818 1502 ntBASIC0.99□□□□□ -2.25
Trem1Q9JKE2 Gm44177-201ENSMUST00000204338 2667 ntBASIC0.99□□□□□ -2.25
Trem1Q9JKE2 Gm11891-201ENSMUST00000121241 619 ntBASIC0.99□□□□□ -2.25
Trem1Q9JKE2 Mir7026-201ENSMUST00000184384 67 ntBASIC0.99□□□□□ -2.25
Trem1Q9JKE2 Gm45654-201ENSMUST00000210980 123 ntBASIC0.99□□□□□ -2.25
Trem1Q9JKE2 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC0.99□□□□□ -2.25
Trem1Q9JKE2 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
Trem1Q9JKE2 Gm23041-201ENSMUST00000083868 106 ntBASIC0.99□□□□□ -2.25
Trem1Q9JKE2 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
Trem1Q9JKE2 Gm22477-201ENSMUST00000122569 316 ntBASIC0.98□□□□□ -2.25
Trem1Q9JKE2 Gm27926-201ENSMUST00000157180 66 ntBASIC0.98□□□□□ -2.25
Trem1Q9JKE2 Gm23670-201ENSMUST00000157469 119 ntBASIC0.98□□□□□ -2.25
Trem1Q9JKE2 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.98□□□□□ -2.25
Trem1Q9JKE2 Mir7063-201ENSMUST00000184158 91 ntBASIC0.98□□□□□ -2.25
Trem1Q9JKE2 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC0.98□□□□□ -2.25
Trem1Q9JKE2 Gm37918-201ENSMUST00000192071 120 ntBASIC0.98□□□□□ -2.25
Trem1Q9JKE2 Gm42719-201ENSMUST00000197393 355 ntBASIC0.98□□□□□ -2.25
Trem1Q9JKE2 CU062626.2-201ENSMUST00000223953 274 ntBASIC0.98□□□□□ -2.25
Trem1Q9JKE2 AC151833.1-201ENSMUST00000227752 574 ntBASIC0.98□□□□□ -2.25
Trem1Q9JKE2 Gm24152-201ENSMUST00000082764 163 ntBASIC0.98□□□□□ -2.25
Trem1Q9JKE2 AC164629.4-201ENSMUST00000218505 3247 ntBASIC0.97□□□□□ -2.25
Trem1Q9JKE2 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
Trem1Q9JKE2 Gm14882-201ENSMUST00000117216 218 ntBASIC0.97□□□□□ -2.25
Trem1Q9JKE2 Gm15443-201ENSMUST00000118947 820 ntBASIC0.97□□□□□ -2.25
Trem1Q9JKE2 Gm23435-201ENSMUST00000157183 156 ntBASIC0.97□□□□□ -2.25
Trem1Q9JKE2 Gm25663-201ENSMUST00000157698 135 ntBASIC0.97□□□□□ -2.25
Trem1Q9JKE2 Gm22113-201ENSMUST00000158343 104 ntBASIC0.97□□□□□ -2.25
Trem1Q9JKE2 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC0.97□□□□□ -2.25
Trem1Q9JKE2 Mir3092-201ENSMUST00000174954 96 ntBASIC0.97□□□□□ -2.25
Trem1Q9JKE2 Gm24308-201ENSMUST00000177773 114 ntBASIC0.97□□□□□ -2.25
Trem1Q9JKE2 Mir6406-201ENSMUST00000183592 120 ntBASIC0.97□□□□□ -2.25
Trem1Q9JKE2 Mir6346-201ENSMUST00000183982 81 ntBASIC0.97□□□□□ -2.25
Trem1Q9JKE2 Gm43487-201ENSMUST00000200331 1031 ntBASIC0.97□□□□□ -2.25
Trem1Q9JKE2 AC155712.1-201ENSMUST00000219704 160 ntBASIC0.97□□□□□ -2.25
Trem1Q9JKE2 Gm45815-201ENSMUST00000220241 146 ntBASIC0.97□□□□□ -2.25
Trem1Q9JKE2 Gm24966-201ENSMUST00000082443 79 ntBASIC0.97□□□□□ -2.25
Trem1Q9JKE2 Mir133a-1-201ENSMUST00000083465 68 ntBASIC0.97□□□□□ -2.25
Trem1Q9JKE2 Gm22723-201ENSMUST00000083820 129 ntBASIC0.97□□□□□ -2.25
Trem1Q9JKE2 Gm26339-201ENSMUST00000102368 99 ntBASIC0.96□□□□□ -2.26
Trem1Q9JKE2 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
Trem1Q9JKE2 Gm23048-201ENSMUST00000157237 129 ntBASIC0.96□□□□□ -2.26
Trem1Q9JKE2 Gm23893-201ENSMUST00000158106 134 ntBASIC0.96□□□□□ -2.26
Trem1Q9JKE2 Gm25166-201ENSMUST00000158909 111 ntBASIC0.96□□□□□ -2.26
Trem1Q9JKE2 Gm27419-201ENSMUST00000184576 109 ntBASIC0.96□□□□□ -2.26
Trem1Q9JKE2 Gm28648-201ENSMUST00000190092 343 ntBASIC0.96□□□□□ -2.26
Trem1Q9JKE2 Gm43512-201ENSMUST00000198495 176 ntBASIC0.96□□□□□ -2.26
Trem1Q9JKE2 Gm44010-201ENSMUST00000204432 331 ntBASIC0.96□□□□□ -2.26
Trem1Q9JKE2 Gm23299-201ENSMUST00000082708 79 ntBASIC0.96□□□□□ -2.26
Trem1Q9JKE2 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
Trem1Q9JKE2 Gm13967-201ENSMUST00000120404 380 ntBASIC0.95□□□□□ -2.26
Trem1Q9JKE2 n-R5s207-201ENSMUST00000122497 118 ntBASIC0.95□□□□□ -2.26
Trem1Q9JKE2 Gm23169-201ENSMUST00000157157 112 ntBASIC0.95□□□□□ -2.26
Trem1Q9JKE2 Gm25486-201ENSMUST00000158726 63 ntBASIC0.95□□□□□ -2.26
Trem1Q9JKE2 Gm2962-201ENSMUST00000159266 336 ntBASIC0.95□□□□□ -2.26
Trem1Q9JKE2 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC0.95□□□□□ -2.26
Trem1Q9JKE2 Gm23379-201ENSMUST00000180026 107 ntBASIC0.95□□□□□ -2.26
Trem1Q9JKE2 Mir7j-201ENSMUST00000184427 122 ntBASIC0.95□□□□□ -2.26
Trem1Q9JKE2 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC0.95□□□□□ -2.26
Trem1Q9JKE2 Gm38274-201ENSMUST00000195689 148 ntBASIC0.95□□□□□ -2.26
Trem1Q9JKE2 Gm42834-201ENSMUST00000196845 256 ntBASIC0.95□□□□□ -2.26
Trem1Q9JKE2 Snord35a-201ENSMUST00000083884 90 ntBASIC0.95□□□□□ -2.26
Trem1Q9JKE2 Gm24271-201ENSMUST00000102327 111 ntBASIC0.94□□□□□ -2.26
Trem1Q9JKE2 Gm23336-201ENSMUST00000117023 123 ntBASIC0.94□□□□□ -2.26
Trem1Q9JKE2 Gm22279-201ENSMUST00000157200 93 ntBASIC0.94□□□□□ -2.26
Trem1Q9JKE2 Gm17067-202ENSMUST00000180131 123 ntBASIC0.94□□□□□ -2.26
Trem1Q9JKE2 Gm24020-201ENSMUST00000180156 108 ntBASIC0.94□□□□□ -2.26
Trem1Q9JKE2 AC124542.1-201ENSMUST00000205588 908 ntBASIC0.94□□□□□ -2.26
Trem1Q9JKE2 Gm18113-201ENSMUST00000220630 303 ntBASIC0.94□□□□□ -2.26
Trem1Q9JKE2 Gm9795-201ENSMUST00000062156 693 ntBASIC0.94□□□□□ -2.26
Trem1Q9JKE2 Gm25789-201ENSMUST00000083294 76 ntBASIC0.94□□□□□ -2.26
Trem1Q9JKE2 Gm22073-201ENSMUST00000122668 189 ntBASIC0.93□□□□□ -2.26
Trem1Q9JKE2 Gm24902-201ENSMUST00000158126 123 ntBASIC0.93□□□□□ -2.26
Trem1Q9JKE2 Mir6917-201ENSMUST00000184111 61 ntBASIC0.93□□□□□ -2.26
Trem1Q9JKE2 Gm28597-201ENSMUST00000187664 666 ntBASIC0.93□□□□□ -2.26
Trem1Q9JKE2 Gm37713-201ENSMUST00000191746 198 ntBASIC0.93□□□□□ -2.26
Trem1Q9JKE2 AC098718.1-201ENSMUST00000226166 175 ntBASIC0.93□□□□□ -2.26
Trem1Q9JKE2 Gm23013-201ENSMUST00000104146 106 ntBASIC0.92□□□□□ -2.26
Trem1Q9JKE2 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC0.92□□□□□ -2.26
Trem1Q9JKE2 Gm14392-201ENSMUST00000120332 401 ntBASIC0.92□□□□□ -2.26
Trem1Q9JKE2 Gm14413-201ENSMUST00000122158 408 ntBASIC0.92□□□□□ -2.26
Trem1Q9JKE2 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC0.92□□□□□ -2.26
Trem1Q9JKE2 Gm28661-201ENSMUST00000188231 681 ntBASIC0.92□□□□□ -2.26
Trem1Q9JKE2 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC0.92□□□□□ -2.26
Trem1Q9JKE2 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC0.92□□□□□ -2.26
Trem1Q9JKE2 Gm20144-201ENSMUST00000203031 165 ntBASIC0.92□□□□□ -2.26
Trem1Q9JKE2 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC0.92□□□□□ -2.26
Trem1Q9JKE2 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC0.92□□□□□ -2.26
Trem1Q9JKE2 Gm18617-201ENSMUST00000222311 259 ntBASIC0.92□□□□□ -2.26
Trem1Q9JKE2 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
Trem1Q9JKE2 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC0.91□□□□□ -2.26
Trem1Q9JKE2 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
Trem1Q9JKE2 Gm23010-201ENSMUST00000104151 126 ntBASIC0.91□□□□□ -2.26
Trem1Q9JKE2 Gm23106-201ENSMUST00000157554 101 ntBASIC0.91□□□□□ -2.26
Trem1Q9JKE2 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
Trem1Q9JKE2 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms