Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Gm25327-201ENSMUST00000180263 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm26058-201ENSMUST00000180294 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm22418-201ENSMUST00000180326 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm27013-201ENSMUST00000182441 1024 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm44954-201ENSMUST00000208513 227 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC0.3□□□□□ -2.36
Trem3Q9JKE1 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 AC116589.7-201ENSMUST00000221061 239 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 AC164117.1-201ENSMUST00000221726 239 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 AC159885.1-201ENSMUST00000222221 199 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 AC167192.4-201ENSMUST00000224087 993 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm23629-201ENSMUST00000082465 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm23924-201ENSMUST00000082474 108 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm22246-201ENSMUST00000082478 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm22749-201ENSMUST00000082490 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm22747-201ENSMUST00000082495 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm22063-201ENSMUST00000082560 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm23057-201ENSMUST00000082801 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm26331-201ENSMUST00000082824 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm24205-201ENSMUST00000082953 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm25405-201ENSMUST00000082973 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm22628-201ENSMUST00000082988 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm26324-201ENSMUST00000083073 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm24535-201ENSMUST00000083140 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm26496-201ENSMUST00000083150 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm26127-201ENSMUST00000083193 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm24456-201ENSMUST00000083198 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm24458-201ENSMUST00000083204 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm24018-201ENSMUST00000083232 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm25790-201ENSMUST00000083293 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm22295-201ENSMUST00000083311 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm25127-201ENSMUST00000083336 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm25583-201ENSMUST00000083413 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm25577-201ENSMUST00000083414 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm24414-201ENSMUST00000083434 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm24861-201ENSMUST00000083459 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm24803-201ENSMUST00000083693 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm23103-201ENSMUST00000083725 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm22580-201ENSMUST00000083727 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm24260-201ENSMUST00000083741 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm23732-201ENSMUST00000083751 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm22682-201ENSMUST00000083854 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm25869-201ENSMUST00000083855 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm24693-201ENSMUST00000083885 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm26317-201ENSMUST00000083894 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm22352-201ENSMUST00000083917 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm24448-201ENSMUST00000083979 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm22798-201ENSMUST00000083992 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm26427-201ENSMUST00000093648 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm22886-201ENSMUST00000093714 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm22170-201ENSMUST00000097247 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm22935-201ENSMUST00000103960 104 ntBASIC0.29□□□□□ -2.36
Trem3Q9JKE1 Gm22545-201ENSMUST00000104350 132 ntBASIC0.29□□□□□ -2.36
Trem3Q9JKE1 Gm16242-201ENSMUST00000117741 334 ntBASIC0.29□□□□□ -2.36
Trem3Q9JKE1 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.29□□□□□ -2.36
Trem3Q9JKE1 Gm22279-201ENSMUST00000157200 93 ntBASIC0.29□□□□□ -2.36
Trem3Q9JKE1 Gm27510-201ENSMUST00000158214 64 ntBASIC0.29□□□□□ -2.36
Trem3Q9JKE1 Gm26173-201ENSMUST00000158416 136 ntBASIC0.29□□□□□ -2.36
Trem3Q9JKE1 Gm3027-201ENSMUST00000167579 451 ntBASIC0.29□□□□□ -2.36
Trem3Q9JKE1 Gm23714-201ENSMUST00000179259 105 ntBASIC0.29□□□□□ -2.36
Trem3Q9JKE1 Gm23144-201ENSMUST00000180226 107 ntBASIC0.29□□□□□ -2.36
Trem3Q9JKE1 Gm28661-201ENSMUST00000188231 681 ntBASIC0.29□□□□□ -2.36
Trem3Q9JKE1 Gm44462-201ENSMUST00000199696 129 ntBASIC0.29□□□□□ -2.36
Trem3Q9JKE1 Mir691-201ENSMUST00000199719 78 ntBASIC0.29□□□□□ -2.36
Trem3Q9JKE1 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.29□□□□□ -2.36
Trem3Q9JKE1 Gm34783-201ENSMUST00000209159 303 ntBASIC0.29□□□□□ -2.36
Trem3Q9JKE1 AC156574.2-201ENSMUST00000228023 282 ntBASIC0.29□□□□□ -2.36
Trem3Q9JKE1 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
Trem3Q9JKE1 Gm11859-201ENSMUST00000118099 455 ntBASIC0.28□□□□□ -2.36
Trem3Q9JKE1 Gm14922-201ENSMUST00000121131 163 ntBASIC0.28□□□□□ -2.36
Trem3Q9JKE1 n-R5s188-201ENSMUST00000122646 105 ntBASIC0.28□□□□□ -2.36
Trem3Q9JKE1 Gm25054-201ENSMUST00000157370 97 ntBASIC0.28□□□□□ -2.36
Trem3Q9JKE1 Gm26004-201ENSMUST00000158804 116 ntBASIC0.28□□□□□ -2.36
Trem3Q9JKE1 Gm24418-201ENSMUST00000177597 79 ntBASIC0.28□□□□□ -2.36
Trem3Q9JKE1 Gm24639-201ENSMUST00000178518 79 ntBASIC0.28□□□□□ -2.36
Trem3Q9JKE1 Gm23076-201ENSMUST00000179082 79 ntBASIC0.28□□□□□ -2.36
Trem3Q9JKE1 Gm25077-201ENSMUST00000179157 79 ntBASIC0.28□□□□□ -2.36
Trem3Q9JKE1 Gm27624-201ENSMUST00000185047 177 ntBASIC0.28□□□□□ -2.36
Trem3Q9JKE1 Gm28414-201ENSMUST00000190111 294 ntBASIC0.28□□□□□ -2.36
Trem3Q9JKE1 Gm9973-202ENSMUST00000220926 166 ntBASIC0.28□□□□□ -2.36
Trem3Q9JKE1 Gm32300-201ENSMUST00000221735 515 ntBASIC0.28□□□□□ -2.36
Trem3Q9JKE1 Gm24623-201ENSMUST00000082616 194 ntBASIC0.28□□□□□ -2.36
Trem3Q9JKE1 Gm24920-201ENSMUST00000083018 85 ntBASIC0.28□□□□□ -2.36
Trem3Q9JKE1 Gm22884-201ENSMUST00000083127 140 ntBASIC0.28□□□□□ -2.36
Trem3Q9JKE1 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC0.27□□□□□ -2.37
Trem3Q9JKE1 Gm26301-201ENSMUST00000104813 95 ntBASIC0.27□□□□□ -2.37
Trem3Q9JKE1 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
Trem3Q9JKE1 Gm23672-201ENSMUST00000157471 107 ntBASIC0.27□□□□□ -2.37
Trem3Q9JKE1 Gm25750-201ENSMUST00000175483 112 ntBASIC0.27□□□□□ -2.37
Trem3Q9JKE1 Gm28688-201ENSMUST00000187301 268 ntBASIC0.27□□□□□ -2.37
Trem3Q9JKE1 Gm44282-201ENSMUST00000203199 190 ntBASIC0.27□□□□□ -2.37
Trem3Q9JKE1 CT009733.1-203ENSMUST00000224033 451 ntBASIC0.27□□□□□ -2.37
Trem3Q9JKE1 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
Trem3Q9JKE1 Gm4746-201ENSMUST00000120395 2406 ntBASIC0.27□□□□□ -2.37
Trem3Q9JKE1 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.27□□□□□ -2.37
Trem3Q9JKE1 Gm12433-201ENSMUST00000119659 255 ntBASIC0.26□□□□□ -2.37
Trem3Q9JKE1 Gm14980-201ENSMUST00000121247 736 ntBASIC0.26□□□□□ -2.37
Trem3Q9JKE1 Gm22308-201ENSMUST00000177609 107 ntBASIC0.26□□□□□ -2.37
Trem3Q9JKE1 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 131.7 ms