Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gm29047-201ENSMUST00000189816 108 ntBASIC-1.02□□□□□ -2.57
Smco4Q9JIS3 Gm28848-201ENSMUST00000189984 168 ntBASIC-1.02□□□□□ -2.57
Smco4Q9JIS3 Snora16a-202ENSMUST00000196061 137 ntBASIC-1.02□□□□□ -2.57
Smco4Q9JIS3 Gm42988-201ENSMUST00000198116 225 ntBASIC-1.02□□□□□ -2.57
Smco4Q9JIS3 Gm45197-201ENSMUST00000205288 151 ntBASIC-1.02□□□□□ -2.57
Smco4Q9JIS3 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC-1.02□□□□□ -2.57
Smco4Q9JIS3 AC159619.2-201ENSMUST00000222924 401 ntBASIC-1.02□□□□□ -2.57
Smco4Q9JIS3 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC-1.02□□□□□ -2.57
Smco4Q9JIS3 Gm24456-201ENSMUST00000083198 107 ntBASIC-1.02□□□□□ -2.57
Smco4Q9JIS3 Gm25783-201ENSMUST00000122525 190 ntBASIC-1.03□□□□□ -2.57
Smco4Q9JIS3 Gm24892-201ENSMUST00000122747 104 ntBASIC-1.03□□□□□ -2.57
Smco4Q9JIS3 Gm23180-201ENSMUST00000158686 125 ntBASIC-1.03□□□□□ -2.57
Smco4Q9JIS3 Mir1264-201ENSMUST00000175381 86 ntBASIC-1.03□□□□□ -2.57
Smco4Q9JIS3 AC138667.2-201ENSMUST00000224880 598 ntBASIC-1.03□□□□□ -2.57
Smco4Q9JIS3 Gm22545-201ENSMUST00000104350 132 ntBASIC-1.04□□□□□ -2.58
Smco4Q9JIS3 Gm15010-201ENSMUST00000117153 407 ntBASIC-1.04□□□□□ -2.58
Smco4Q9JIS3 Anp32-ps-201ENSMUST00000118265 388 ntBASIC-1.04□□□□□ -2.58
Smco4Q9JIS3 Gm24839-201ENSMUST00000122602 107 ntBASIC-1.04□□□□□ -2.58
Smco4Q9JIS3 Gm28956-201ENSMUST00000189047 427 ntBASIC-1.04□□□□□ -2.58
Smco4Q9JIS3 AL845349.1-201ENSMUST00000213794 78 ntBASIC-1.04□□□□□ -2.58
Smco4Q9JIS3 Gm22620-201ENSMUST00000082700 133 ntBASIC-1.04□□□□□ -2.58
Smco4Q9JIS3 Gm25408-201ENSMUST00000104104 133 ntBASIC-1.05□□□□□ -2.58
Smco4Q9JIS3 Gm25032-201ENSMUST00000175411 84 ntBASIC-1.05□□□□□ -2.58
Smco4Q9JIS3 Gm23151-201ENSMUST00000178061 107 ntBASIC-1.05□□□□□ -2.58
Smco4Q9JIS3 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC-1.05□□□□□ -2.58
Smco4Q9JIS3 AC163295.1-201ENSMUST00000227840 314 ntBASIC-1.05□□□□□ -2.58
Smco4Q9JIS3 CT030170.3-201ENSMUST00000221205 1815 ntBASIC-1.05□□□□□ -2.58
Smco4Q9JIS3 Gm25647-201ENSMUST00000101832 78 ntBASIC-1.06□□□□□ -2.58
Smco4Q9JIS3 Gm25823-201ENSMUST00000101995 78 ntBASIC-1.06□□□□□ -2.58
Smco4Q9JIS3 Gm12771-201ENSMUST00000120246 135 ntBASIC-1.06□□□□□ -2.58
Smco4Q9JIS3 Gm15914-201ENSMUST00000161922 309 ntBASIC-1.06□□□□□ -2.58
Smco4Q9JIS3 Gm24220-201ENSMUST00000177753 79 ntBASIC-1.06□□□□□ -2.58
Smco4Q9JIS3 Gm25988-201ENSMUST00000177759 79 ntBASIC-1.06□□□□□ -2.58
Smco4Q9JIS3 Gm23471-201ENSMUST00000177886 79 ntBASIC-1.06□□□□□ -2.58
Smco4Q9JIS3 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC-1.06□□□□□ -2.58
Smco4Q9JIS3 Gm26488-201ENSMUST00000178225 79 ntBASIC-1.06□□□□□ -2.58
Smco4Q9JIS3 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC-1.06□□□□□ -2.58
Smco4Q9JIS3 Gm23449-201ENSMUST00000179208 79 ntBASIC-1.06□□□□□ -2.58
Smco4Q9JIS3 Gm25221-201ENSMUST00000180051 79 ntBASIC-1.06□□□□□ -2.58
Smco4Q9JIS3 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC-1.06□□□□□ -2.58
Smco4Q9JIS3 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC-1.06□□□□□ -2.58
Smco4Q9JIS3 Gm25814-201ENSMUST00000082754 107 ntBASIC-1.06□□□□□ -2.58
Smco4Q9JIS3 Mir709-201ENSMUST00000102190 88 ntBASIC-1.07□□□□□ -2.58
Smco4Q9JIS3 Gm14716-201ENSMUST00000120138 718 ntBASIC-1.07□□□□□ -2.58
Smco4Q9JIS3 Gm12045-201ENSMUST00000122122 573 ntBASIC-1.07□□□□□ -2.58
Smco4Q9JIS3 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC-1.07□□□□□ -2.58
Smco4Q9JIS3 Gm23024-201ENSMUST00000158770 292 ntBASIC-1.07□□□□□ -2.58
Smco4Q9JIS3 Gm21726-201ENSMUST00000179654 392 ntBASIC-1.07□□□□□ -2.58
Smco4Q9JIS3 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC-1.07□□□□□ -2.58
Smco4Q9JIS3 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC-1.08□□□□□ -2.58
Smco4Q9JIS3 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC-1.08□□□□□ -2.58
Smco4Q9JIS3 Gm23586-201ENSMUST00000157657 123 ntBASIC-1.08□□□□□ -2.58
Smco4Q9JIS3 Gm24345-201ENSMUST00000158706 124 ntBASIC-1.08□□□□□ -2.58
Smco4Q9JIS3 Gm27861-201ENSMUST00000183920 214 ntBASIC-1.08□□□□□ -2.58
Smco4Q9JIS3 Gm28579-201ENSMUST00000186143 369 ntBASIC-1.08□□□□□ -2.58
Smco4Q9JIS3 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC-1.08□□□□□ -2.58
Smco4Q9JIS3 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC-1.08□□□□□ -2.58
Smco4Q9JIS3 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC-1.08□□□□□ -2.58
Smco4Q9JIS3 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC-1.08□□□□□ -2.58
Smco4Q9JIS3 Gm42721-201ENSMUST00000197165 1523 ntBASIC-1.09□□□□□ -2.58
Smco4Q9JIS3 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC-1.09□□□□□ -2.58
Smco4Q9JIS3 n-R5s188-201ENSMUST00000122646 105 ntBASIC-1.09□□□□□ -2.58
Smco4Q9JIS3 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC-1.09□□□□□ -2.58
Smco4Q9JIS3 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC-1.09□□□□□ -2.58
Smco4Q9JIS3 Gm24910-201ENSMUST00000157289 272 ntBASIC-1.09□□□□□ -2.58
Smco4Q9JIS3 Gm23589-201ENSMUST00000157660 105 ntBASIC-1.09□□□□□ -2.58
Smco4Q9JIS3 Gm23542-201ENSMUST00000158208 96 ntBASIC-1.09□□□□□ -2.58
Smco4Q9JIS3 Gm23196-201ENSMUST00000158806 107 ntBASIC-1.09□□□□□ -2.58
Smco4Q9JIS3 Mir3105-201ENSMUST00000175480 85 ntBASIC-1.09□□□□□ -2.58
Smco4Q9JIS3 Gm25739-201ENSMUST00000082886 107 ntBASIC-1.09□□□□□ -2.58
Smco4Q9JIS3 Gm24616-201ENSMUST00000083274 139 ntBASIC-1.09□□□□□ -2.58
Smco4Q9JIS3 Mir200b-201ENSMUST00000083615 70 ntBASIC-1.09□□□□□ -2.58
Smco4Q9JIS3 Gm14947-201ENSMUST00000133704 303 ntBASIC-1.1□□□□□ -2.59
Smco4Q9JIS3 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC-1.1□□□□□ -2.59
Smco4Q9JIS3 Gm29216-201ENSMUST00000187117 492 ntBASIC-1.1□□□□□ -2.59
Smco4Q9JIS3 Gm44010-201ENSMUST00000204432 331 ntBASIC-1.1□□□□□ -2.59
Smco4Q9JIS3 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC-1.1□□□□□ -2.59
Smco4Q9JIS3 AC098718.1-201ENSMUST00000226166 175 ntBASIC-1.1□□□□□ -2.59
Smco4Q9JIS3 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC-1.1□□□□□ -2.59
Smco4Q9JIS3 Mir183-201ENSMUST00000083685 70 ntBASIC-1.1□□□□□ -2.59
Smco4Q9JIS3 Mir669f-201ENSMUST00000103850 121 ntBASIC-1.11□□□□□ -2.59
Smco4Q9JIS3 Gm26081-201ENSMUST00000104068 132 ntBASIC-1.11□□□□□ -2.59
Smco4Q9JIS3 Gm24278-201ENSMUST00000104239 127 ntBASIC-1.11□□□□□ -2.59
Smco4Q9JIS3 Gm22193-201ENSMUST00000116868 76 ntBASIC-1.11□□□□□ -2.59
Smco4Q9JIS3 Gm11794-201ENSMUST00000119446 237 ntBASIC-1.11□□□□□ -2.59
Smco4Q9JIS3 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC-1.11□□□□□ -2.59
Smco4Q9JIS3 Gm8502-201ENSMUST00000185708 901 ntBASIC-1.11□□□□□ -2.59
Smco4Q9JIS3 Gm28661-201ENSMUST00000188231 681 ntBASIC-1.11□□□□□ -2.59
Smco4Q9JIS3 Gm34073-201ENSMUST00000195736 212 ntBASIC-1.11□□□□□ -2.59
Smco4Q9JIS3 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC-1.12□□□□□ -2.59
Smco4Q9JIS3 Gm22048-201ENSMUST00000104721 89 ntBASIC-1.12□□□□□ -2.59
Smco4Q9JIS3 Gm25543-201ENSMUST00000122678 312 ntBASIC-1.12□□□□□ -2.59
Smco4Q9JIS3 Gm24500-201ENSMUST00000158447 124 ntBASIC-1.12□□□□□ -2.59
Smco4Q9JIS3 Gm22914-201ENSMUST00000175195 77 ntBASIC-1.12□□□□□ -2.59
Smco4Q9JIS3 Mir6355-201ENSMUST00000183687 106 ntBASIC-1.12□□□□□ -2.59
Smco4Q9JIS3 Gm44665-201ENSMUST00000205381 251 ntBASIC-1.12□□□□□ -2.59
Smco4Q9JIS3 Gm44961-201ENSMUST00000207450 196 ntBASIC-1.12□□□□□ -2.59
Smco4Q9JIS3 AC147633.1-201ENSMUST00000225134 259 ntBASIC-1.12□□□□□ -2.59
Smco4Q9JIS3 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC-1.12□□□□□ -2.59
Smco4Q9JIS3 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC-1.12□□□□□ -2.59
Retrieved 100 of 76,532 protein–RNA pairs in 126.1 ms