Protein–RNA interactions for Protein: Q9JIF7

Copb1, Coatomer subunit beta, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1Q9JIF7 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.52□□□□□ -2.01
Copb1Q9JIF7 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
Copb1Q9JIF7 Gm14838-201ENSMUST00000118913 248 ntBASIC2.51□□□□□ -2.01
Copb1Q9JIF7 Gm12721-201ENSMUST00000120621 268 ntBASIC2.51□□□□□ -2.01
Copb1Q9JIF7 Gm24937-201ENSMUST00000122597 134 ntBASIC2.51□□□□□ -2.01
Copb1Q9JIF7 Gm25720-201ENSMUST00000157503 105 ntBASIC2.51□□□□□ -2.01
Copb1Q9JIF7 Gm22083-201ENSMUST00000157586 102 ntBASIC2.51□□□□□ -2.01
Copb1Q9JIF7 Gm24075-201ENSMUST00000158175 72 ntBASIC2.51□□□□□ -2.01
Copb1Q9JIF7 Gm23545-201ENSMUST00000158205 104 ntBASIC2.51□□□□□ -2.01
Copb1Q9JIF7 Gm24006-201ENSMUST00000158462 132 ntBASIC2.51□□□□□ -2.01
Copb1Q9JIF7 Gm16584-201ENSMUST00000159267 189 ntBASIC2.51□□□□□ -2.01
Copb1Q9JIF7 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Copb1Q9JIF7 Gm5224-201ENSMUST00000183060 350 ntBASIC2.51□□□□□ -2.01
Copb1Q9JIF7 Gm6060-201ENSMUST00000188671 251 ntBASIC2.51□□□□□ -2.01
Copb1Q9JIF7 Gm19901-201ENSMUST00000192191 495 ntBASIC2.51□□□□□ -2.01
Copb1Q9JIF7 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.51□□□□□ -2.01
Copb1Q9JIF7 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC2.51□□□□□ -2.01
Copb1Q9JIF7 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.51□□□□□ -2.01
Copb1Q9JIF7 Snord104-201ENSMUST00000083192 70 ntBASIC2.51□□□□□ -2.01
Copb1Q9JIF7 Mir127-201ENSMUST00000093568 70 ntBASIC2.51□□□□□ -2.01
Copb1Q9JIF7 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.51□□□□□ -2.01
Copb1Q9JIF7 Mir466h-201ENSMUST00000104748 81 ntBASIC2.5□□□□□ -2.01
Copb1Q9JIF7 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.5□□□□□ -2.01
Copb1Q9JIF7 Gm22883-201ENSMUST00000157376 106 ntBASIC2.5□□□□□ -2.01
Copb1Q9JIF7 Gm25866-201ENSMUST00000158245 112 ntBASIC2.5□□□□□ -2.01
Copb1Q9JIF7 Gm24769-201ENSMUST00000158506 129 ntBASIC2.5□□□□□ -2.01
Copb1Q9JIF7 Gm16561-201ENSMUST00000163001 192 ntBASIC2.5□□□□□ -2.01
Copb1Q9JIF7 Mir5118-201ENSMUST00000175551 67 ntBASIC2.5□□□□□ -2.01
Copb1Q9JIF7 Gm27803-201ENSMUST00000183763 119 ntBASIC2.5□□□□□ -2.01
Copb1Q9JIF7 Gm43220-201ENSMUST00000199299 282 ntBASIC2.5□□□□□ -2.01
Copb1Q9JIF7 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.5□□□□□ -2.01
Copb1Q9JIF7 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC2.5□□□□□ -2.01
Copb1Q9JIF7 AC027184.1-201ENSMUST00000226991 424 ntBASIC2.5□□□□□ -2.01
Copb1Q9JIF7 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Copb1Q9JIF7 Gm24457-201ENSMUST00000083196 105 ntBASIC2.5□□□□□ -2.01
Copb1Q9JIF7 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.5□□□□□ -2.01
Copb1Q9JIF7 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
Copb1Q9JIF7 Gm25390-201ENSMUST00000157341 103 ntBASIC2.49□□□□□ -2.01
Copb1Q9JIF7 Gm28020-201ENSMUST00000157739 67 ntBASIC2.49□□□□□ -2.01
Copb1Q9JIF7 Gm23033-201ENSMUST00000157996 134 ntBASIC2.49□□□□□ -2.01
Copb1Q9JIF7 Gm26024-201ENSMUST00000158657 322 ntBASIC2.49□□□□□ -2.01
Copb1Q9JIF7 Gm22800-201ENSMUST00000175627 94 ntBASIC2.49□□□□□ -2.01
Copb1Q9JIF7 Gm27761-201ENSMUST00000184091 131 ntBASIC2.49□□□□□ -2.01
Copb1Q9JIF7 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.49□□□□□ -2.01
Copb1Q9JIF7 Gm43193-201ENSMUST00000197732 441 ntBASIC2.49□□□□□ -2.01
Copb1Q9JIF7 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.49□□□□□ -2.01
Copb1Q9JIF7 Gm24966-201ENSMUST00000082443 79 ntBASIC2.49□□□□□ -2.01
Copb1Q9JIF7 Gm25796-201ENSMUST00000082645 163 ntBASIC2.49□□□□□ -2.01
Copb1Q9JIF7 Gm22299-201ENSMUST00000082663 136 ntBASIC2.49□□□□□ -2.01
Copb1Q9JIF7 Gm26265-201ENSMUST00000083277 135 ntBASIC2.49□□□□□ -2.01
Copb1Q9JIF7 Gm24163-201ENSMUST00000093660 132 ntBASIC2.49□□□□□ -2.01
Copb1Q9JIF7 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Copb1Q9JIF7 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Copb1Q9JIF7 Gm12080-201ENSMUST00000119821 1883 ntBASIC2.48□□□□□ -2.01
Copb1Q9JIF7 Gm6897-201ENSMUST00000117714 138 ntBASIC2.48□□□□□ -2.01
Copb1Q9JIF7 Gm14758-201ENSMUST00000119104 138 ntBASIC2.48□□□□□ -2.01
Copb1Q9JIF7 Gm6829-201ENSMUST00000119858 360 ntBASIC2.48□□□□□ -2.01
Copb1Q9JIF7 Gm25115-201ENSMUST00000157187 140 ntBASIC2.48□□□□□ -2.01
Copb1Q9JIF7 Gm16326-201ENSMUST00000162843 414 ntBASIC2.48□□□□□ -2.01
Copb1Q9JIF7 Mir8090-201ENSMUST00000185078 136 ntBASIC2.48□□□□□ -2.01
Copb1Q9JIF7 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC2.48□□□□□ -2.01
Copb1Q9JIF7 Gm43993-201ENSMUST00000203972 247 ntBASIC2.48□□□□□ -2.01
Copb1Q9JIF7 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC2.48□□□□□ -2.01
Copb1Q9JIF7 Gm45543-201ENSMUST00000209327 88 ntBASIC2.48□□□□□ -2.01
Copb1Q9JIF7 Gm45445-201ENSMUST00000209586 232 ntBASIC2.48□□□□□ -2.01
Copb1Q9JIF7 Gm24698-201ENSMUST00000083883 130 ntBASIC2.48□□□□□ -2.01
Copb1Q9JIF7 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.47□□□□□ -2.01
Copb1Q9JIF7 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
Copb1Q9JIF7 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Copb1Q9JIF7 Gm26342-201ENSMUST00000104557 129 ntBASIC2.47□□□□□ -2.01
Copb1Q9JIF7 Trav20-201ENSMUST00000142754 347 ntBASIC2.47□□□□□ -2.01
Copb1Q9JIF7 Gm16510-201ENSMUST00000153501 249 ntBASIC2.47□□□□□ -2.01
Copb1Q9JIF7 Gm25012-201ENSMUST00000158396 164 ntBASIC2.47□□□□□ -2.01
Copb1Q9JIF7 Gm27476-201ENSMUST00000183366 104 ntBASIC2.47□□□□□ -2.01
Copb1Q9JIF7 Gm28647-201ENSMUST00000188416 197 ntBASIC2.47□□□□□ -2.01
Copb1Q9JIF7 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Copb1Q9JIF7 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.47□□□□□ -2.01
Copb1Q9JIF7 Gm25199-201ENSMUST00000083095 104 ntBASIC2.47□□□□□ -2.01
Copb1Q9JIF7 Gm23249-201ENSMUST00000083369 161 ntBASIC2.47□□□□□ -2.01
Copb1Q9JIF7 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
Copb1Q9JIF7 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
Copb1Q9JIF7 Gm23472-201ENSMUST00000101806 191 ntBASIC2.46□□□□□ -2.02
Copb1Q9JIF7 Gm23803-201ENSMUST00000104610 132 ntBASIC2.46□□□□□ -2.02
Copb1Q9JIF7 Gm22678-201ENSMUST00000116974 101 ntBASIC2.46□□□□□ -2.02
Copb1Q9JIF7 Gm12513-201ENSMUST00000118617 352 ntBASIC2.46□□□□□ -2.02
Copb1Q9JIF7 Gm12926-201ENSMUST00000121158 409 ntBASIC2.46□□□□□ -2.02
Copb1Q9JIF7 Gm24911-201ENSMUST00000157292 136 ntBASIC2.46□□□□□ -2.02
Copb1Q9JIF7 Gm25059-201ENSMUST00000157367 117 ntBASIC2.46□□□□□ -2.02
Copb1Q9JIF7 Gm23535-201ENSMUST00000157542 106 ntBASIC2.46□□□□□ -2.02
Copb1Q9JIF7 Gm25654-201ENSMUST00000158467 88 ntBASIC2.46□□□□□ -2.02
Copb1Q9JIF7 Gm25476-201ENSMUST00000175125 185 ntBASIC2.46□□□□□ -2.02
Copb1Q9JIF7 Gm24497-201ENSMUST00000177868 191 ntBASIC2.46□□□□□ -2.02
Copb1Q9JIF7 Gm23190-201ENSMUST00000180307 64 ntBASIC2.46□□□□□ -2.02
Copb1Q9JIF7 Gm28627-201ENSMUST00000186141 453 ntBASIC2.46□□□□□ -2.02
Copb1Q9JIF7 Trbv18-201ENSMUST00000194256 294 ntBASIC2.46□□□□□ -2.02
Copb1Q9JIF7 Mir378a-201ENSMUST00000198300 66 ntBASIC2.46□□□□□ -2.02
Copb1Q9JIF7 Gm42774-201ENSMUST00000198854 283 ntBASIC2.46□□□□□ -2.02
Copb1Q9JIF7 AC159896.1-201ENSMUST00000215264 215 ntBASIC2.46□□□□□ -2.02
Copb1Q9JIF7 AC166830.2-201ENSMUST00000225821 196 ntBASIC2.46□□□□□ -2.02
Copb1Q9JIF7 Gm25589-201ENSMUST00000082502 166 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 100.2 ms