Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Mir29c-201ENSMUST00000083614 88 ntBASIC2.38□□□□□ -2.03
Trim54Q9ERP3 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
Trim54Q9ERP3 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
Trim54Q9ERP3 Gm23950-201ENSMUST00000104026 129 ntBASIC2.37□□□□□ -2.03
Trim54Q9ERP3 Gm23951-201ENSMUST00000104029 132 ntBASIC2.37□□□□□ -2.03
Trim54Q9ERP3 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.37□□□□□ -2.03
Trim54Q9ERP3 Gm22027-201ENSMUST00000122737 127 ntBASIC2.37□□□□□ -2.03
Trim54Q9ERP3 Gm24909-201ENSMUST00000157290 280 ntBASIC2.37□□□□□ -2.03
Trim54Q9ERP3 Gm23535-201ENSMUST00000157542 106 ntBASIC2.37□□□□□ -2.03
Trim54Q9ERP3 Gm24010-201ENSMUST00000157731 282 ntBASIC2.37□□□□□ -2.03
Trim54Q9ERP3 Gm23858-201ENSMUST00000158384 106 ntBASIC2.37□□□□□ -2.03
Trim54Q9ERP3 Mir1936-201ENSMUST00000158699 93 ntBASIC2.37□□□□□ -2.03
Trim54Q9ERP3 Mir6406-201ENSMUST00000183592 120 ntBASIC2.37□□□□□ -2.03
Trim54Q9ERP3 Mir465d-201ENSMUST00000196314 58 ntBASIC2.37□□□□□ -2.03
Trim54Q9ERP3 Gm42834-201ENSMUST00000196845 256 ntBASIC2.37□□□□□ -2.03
Trim54Q9ERP3 Mir376a-201ENSMUST00000197584 68 ntBASIC2.37□□□□□ -2.03
Trim54Q9ERP3 Gm44409-201ENSMUST00000198810 166 ntBASIC2.37□□□□□ -2.03
Trim54Q9ERP3 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.37□□□□□ -2.03
Trim54Q9ERP3 Gm46389-201ENSMUST00000223199 392 ntBASIC2.37□□□□□ -2.03
Trim54Q9ERP3 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC2.37□□□□□ -2.03
Trim54Q9ERP3 Gm24164-201ENSMUST00000093663 104 ntBASIC2.37□□□□□ -2.03
Trim54Q9ERP3 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Trim54Q9ERP3 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.36□□□□□ -2.03
Trim54Q9ERP3 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.36□□□□□ -2.03
Trim54Q9ERP3 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Trim54Q9ERP3 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.36□□□□□ -2.03
Trim54Q9ERP3 n-R5s67-201ENSMUST00000104336 114 ntBASIC2.36□□□□□ -2.03
Trim54Q9ERP3 Gm25315-201ENSMUST00000116823 121 ntBASIC2.36□□□□□ -2.03
Trim54Q9ERP3 Gm14652-201ENSMUST00000118479 235 ntBASIC2.36□□□□□ -2.03
Trim54Q9ERP3 Gm25362-201ENSMUST00000158854 105 ntBASIC2.36□□□□□ -2.03
Trim54Q9ERP3 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC2.36□□□□□ -2.03
Trim54Q9ERP3 Gm27793-201ENSMUST00000183405 76 ntBASIC2.36□□□□□ -2.03
Trim54Q9ERP3 Mir3069-201ENSMUST00000198802 65 ntBASIC2.36□□□□□ -2.03
Trim54Q9ERP3 Gm45543-201ENSMUST00000209327 88 ntBASIC2.36□□□□□ -2.03
Trim54Q9ERP3 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC2.36□□□□□ -2.03
Trim54Q9ERP3 CT010454.1-201ENSMUST00000225975 265 ntBASIC2.36□□□□□ -2.03
Trim54Q9ERP3 Mir423-201ENSMUST00000083584 109 ntBASIC2.36□□□□□ -2.03
Trim54Q9ERP3 Gm26175-201ENSMUST00000083794 131 ntBASIC2.36□□□□□ -2.03
Trim54Q9ERP3 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.35□□□□□ -2.03
Trim54Q9ERP3 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.35□□□□□ -2.03
Trim54Q9ERP3 Gm23048-201ENSMUST00000157237 129 ntBASIC2.35□□□□□ -2.03
Trim54Q9ERP3 Gm23642-201ENSMUST00000157858 258 ntBASIC2.35□□□□□ -2.03
Trim54Q9ERP3 Gm22803-201ENSMUST00000158049 283 ntBASIC2.35□□□□□ -2.03
Trim54Q9ERP3 Mir1927-201ENSMUST00000158579 109 ntBASIC2.35□□□□□ -2.03
Trim54Q9ERP3 Gm26092-201ENSMUST00000179798 97 ntBASIC2.35□□□□□ -2.03
Trim54Q9ERP3 Mir669a-1-201ENSMUST00000180238 97 ntBASIC2.35□□□□□ -2.03
Trim54Q9ERP3 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC2.35□□□□□ -2.03
Trim54Q9ERP3 AC115735.2-201ENSMUST00000227135 351 ntBASIC2.35□□□□□ -2.03
Trim54Q9ERP3 Gm24355-201ENSMUST00000082858 122 ntBASIC2.35□□□□□ -2.03
Trim54Q9ERP3 Gm22972-201ENSMUST00000083297 131 ntBASIC2.35□□□□□ -2.03
Trim54Q9ERP3 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.35□□□□□ -2.03
Trim54Q9ERP3 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.35□□□□□ -2.03
Trim54Q9ERP3 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Trim54Q9ERP3 Mir875-201ENSMUST00000104698 78 ntBASIC2.34□□□□□ -2.03
Trim54Q9ERP3 Gm26156-201ENSMUST00000116999 123 ntBASIC2.34□□□□□ -2.03
Trim54Q9ERP3 Gm22321-201ENSMUST00000157152 104 ntBASIC2.34□□□□□ -2.03
Trim54Q9ERP3 Gm24900-201ENSMUST00000158128 134 ntBASIC2.34□□□□□ -2.03
Trim54Q9ERP3 Gm24769-201ENSMUST00000158506 129 ntBASIC2.34□□□□□ -2.03
Trim54Q9ERP3 Gm24837-201ENSMUST00000158683 81 ntBASIC2.34□□□□□ -2.03
Trim54Q9ERP3 Gm25996-201ENSMUST00000175393 117 ntBASIC2.34□□□□□ -2.03
Trim54Q9ERP3 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC2.34□□□□□ -2.03
Trim54Q9ERP3 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Trim54Q9ERP3 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.34□□□□□ -2.03
Trim54Q9ERP3 Mir6375-201ENSMUST00000197176 95 ntBASIC2.34□□□□□ -2.03
Trim54Q9ERP3 Gm45150-201ENSMUST00000206051 467 ntBASIC2.34□□□□□ -2.03
Trim54Q9ERP3 AC165092.3-201ENSMUST00000223602 282 ntBASIC2.34□□□□□ -2.03
Trim54Q9ERP3 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Trim54Q9ERP3 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.04
Trim54Q9ERP3 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.34□□□□□ -2.04
Trim54Q9ERP3 Gm6444-201ENSMUST00000119611 458 ntBASIC2.33□□□□□ -2.04
Trim54Q9ERP3 Gm22281-201ENSMUST00000157198 103 ntBASIC2.33□□□□□ -2.04
Trim54Q9ERP3 Gm22221-201ENSMUST00000157362 103 ntBASIC2.33□□□□□ -2.04
Trim54Q9ERP3 Gm22118-201ENSMUST00000175593 171 ntBASIC2.33□□□□□ -2.04
Trim54Q9ERP3 Gm27878-201ENSMUST00000184000 106 ntBASIC2.33□□□□□ -2.04
Trim54Q9ERP3 Mir7026-201ENSMUST00000184384 67 ntBASIC2.33□□□□□ -2.04
Trim54Q9ERP3 Gm37918-201ENSMUST00000192071 120 ntBASIC2.33□□□□□ -2.04
Trim54Q9ERP3 Gm9795-201ENSMUST00000062156 693 ntBASIC2.33□□□□□ -2.04
Trim54Q9ERP3 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.33□□□□□ -2.04
Trim54Q9ERP3 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Trim54Q9ERP3 Mir669g-201ENSMUST00000116809 123 ntBASIC2.32□□□□□ -2.04
Trim54Q9ERP3 Gm25321-201ENSMUST00000122558 102 ntBASIC2.32□□□□□ -2.04
Trim54Q9ERP3 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.32□□□□□ -2.04
Trim54Q9ERP3 Gm7258-201ENSMUST00000179317 300 ntBASIC2.32□□□□□ -2.04
Trim54Q9ERP3 Gm22951-201ENSMUST00000179471 107 ntBASIC2.32□□□□□ -2.04
Trim54Q9ERP3 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC2.32□□□□□ -2.04
Trim54Q9ERP3 Gm32175-201ENSMUST00000193641 346 ntBASIC2.32□□□□□ -2.04
Trim54Q9ERP3 Gm43220-201ENSMUST00000199299 282 ntBASIC2.32□□□□□ -2.04
Trim54Q9ERP3 Gm22571-201ENSMUST00000082984 70 ntBASIC2.32□□□□□ -2.04
Trim54Q9ERP3 Gm24661-201ENSMUST00000083205 104 ntBASIC2.32□□□□□ -2.04
Trim54Q9ERP3 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
Trim54Q9ERP3 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.32□□□□□ -2.04
Trim54Q9ERP3 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.32□□□□□ -2.04
Trim54Q9ERP3 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.31□□□□□ -2.04
Trim54Q9ERP3 Mir374b-201ENSMUST00000102314 95 ntBASIC2.31□□□□□ -2.04
Trim54Q9ERP3 Gm23011-201ENSMUST00000104148 132 ntBASIC2.31□□□□□ -2.04
Trim54Q9ERP3 Gm15215-201ENSMUST00000117773 489 ntBASIC2.31□□□□□ -2.04
Trim54Q9ERP3 Gm13588-201ENSMUST00000120026 135 ntBASIC2.31□□□□□ -2.04
Trim54Q9ERP3 Gm26280-201ENSMUST00000157096 101 ntBASIC2.31□□□□□ -2.04
Trim54Q9ERP3 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Trim54Q9ERP3 Gm44977-201ENSMUST00000205283 420 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 103 ms