Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm5001-201ENSMUST00000204361 331 ntBASIC0.9□□□□□ -2.27
Lima1Q9ERG0 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC0.9□□□□□ -2.27
Lima1Q9ERG0 Gm45878-201ENSMUST00000211839 241 ntBASIC0.9□□□□□ -2.27
Lima1Q9ERG0 AC147101.1-201ENSMUST00000217964 312 ntBASIC0.9□□□□□ -2.27
Lima1Q9ERG0 CT010449.1-201ENSMUST00000220624 153 ntBASIC0.9□□□□□ -2.27
Lima1Q9ERG0 AC154328.1-201ENSMUST00000225875 307 ntBASIC0.9□□□□□ -2.27
Lima1Q9ERG0 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
Lima1Q9ERG0 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC0.9□□□□□ -2.27
Lima1Q9ERG0 Gm9059-201ENSMUST00000118319 183 ntBASIC0.89□□□□□ -2.27
Lima1Q9ERG0 Gm11358-201ENSMUST00000122310 373 ntBASIC0.89□□□□□ -2.27
Lima1Q9ERG0 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC0.89□□□□□ -2.27
Lima1Q9ERG0 Gm22233-201ENSMUST00000157464 114 ntBASIC0.89□□□□□ -2.27
Lima1Q9ERG0 Gm23893-201ENSMUST00000158106 134 ntBASIC0.89□□□□□ -2.27
Lima1Q9ERG0 Gm25868-201ENSMUST00000158253 114 ntBASIC0.89□□□□□ -2.27
Lima1Q9ERG0 Gm24221-201ENSMUST00000158833 313 ntBASIC0.89□□□□□ -2.27
Lima1Q9ERG0 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC0.89□□□□□ -2.27
Lima1Q9ERG0 Gm25253-201ENSMUST00000179958 107 ntBASIC0.89□□□□□ -2.27
Lima1Q9ERG0 Gm29661-201ENSMUST00000186781 315 ntBASIC0.89□□□□□ -2.27
Lima1Q9ERG0 Gm29308-201ENSMUST00000188863 315 ntBASIC0.89□□□□□ -2.27
Lima1Q9ERG0 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
Lima1Q9ERG0 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
Lima1Q9ERG0 Gm5010-201ENSMUST00000213131 260 ntBASIC0.89□□□□□ -2.27
Lima1Q9ERG0 AC164297.3-201ENSMUST00000224238 94 ntBASIC0.89□□□□□ -2.27
Lima1Q9ERG0 Gm23731-201ENSMUST00000083749 107 ntBASIC0.89□□□□□ -2.27
Lima1Q9ERG0 Gm14923-201ENSMUST00000118270 155 ntBASIC0.88□□□□□ -2.27
Lima1Q9ERG0 Gm11410-201ENSMUST00000120053 1143 ntBASIC0.88□□□□□ -2.27
Lima1Q9ERG0 Gm11389-201ENSMUST00000121407 430 ntBASIC0.88□□□□□ -2.27
Lima1Q9ERG0 Gm25121-201ENSMUST00000179846 79 ntBASIC0.88□□□□□ -2.27
Lima1Q9ERG0 Gm27817-201ENSMUST00000184302 233 ntBASIC0.88□□□□□ -2.27
Lima1Q9ERG0 Gm43911-201ENSMUST00000203097 76 ntBASIC0.88□□□□□ -2.27
Lima1Q9ERG0 Gm23299-201ENSMUST00000082708 79 ntBASIC0.88□□□□□ -2.27
Lima1Q9ERG0 Gm23515-201ENSMUST00000082829 107 ntBASIC0.88□□□□□ -2.27
Lima1Q9ERG0 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC0.87□□□□□ -2.27
Lima1Q9ERG0 Gm22544-201ENSMUST00000104349 127 ntBASIC0.87□□□□□ -2.27
Lima1Q9ERG0 Gm11862-201ENSMUST00000119678 659 ntBASIC0.87□□□□□ -2.27
Lima1Q9ERG0 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.87□□□□□ -2.27
Lima1Q9ERG0 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
Lima1Q9ERG0 Gm23277-201ENSMUST00000157914 136 ntBASIC0.87□□□□□ -2.27
Lima1Q9ERG0 Gm24808-201ENSMUST00000157993 118 ntBASIC0.87□□□□□ -2.27
Lima1Q9ERG0 Mir1936-201ENSMUST00000158699 93 ntBASIC0.87□□□□□ -2.27
Lima1Q9ERG0 Gm17052-201ENSMUST00000165496 289 ntBASIC0.87□□□□□ -2.27
Lima1Q9ERG0 Gm24154-201ENSMUST00000175261 130 ntBASIC0.87□□□□□ -2.27
Lima1Q9ERG0 Mir7009-201ENSMUST00000184519 64 ntBASIC0.87□□□□□ -2.27
Lima1Q9ERG0 Gm45403-201ENSMUST00000209453 276 ntBASIC0.87□□□□□ -2.27
Lima1Q9ERG0 Gm43960-201ENSMUST00000204249 5020 ntBASIC0.87□□□□□ -2.27
Lima1Q9ERG0 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC0.86□□□□□ -2.27
Lima1Q9ERG0 AC102369.2-201ENSMUST00000219725 1679 ntBASIC0.86□□□□□ -2.27
Lima1Q9ERG0 Gm22689-201ENSMUST00000102452 110 ntBASIC0.86□□□□□ -2.27
Lima1Q9ERG0 Gm24588-201ENSMUST00000116696 83 ntBASIC0.86□□□□□ -2.27
Lima1Q9ERG0 Gm14803-201ENSMUST00000117163 361 ntBASIC0.86□□□□□ -2.27
Lima1Q9ERG0 Gm25559-201ENSMUST00000157182 74 ntBASIC0.86□□□□□ -2.27
Lima1Q9ERG0 Gm24510-201ENSMUST00000174965 94 ntBASIC0.86□□□□□ -2.27
Lima1Q9ERG0 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
Lima1Q9ERG0 Mir7j-201ENSMUST00000184427 122 ntBASIC0.86□□□□□ -2.27
Lima1Q9ERG0 Gm27919-201ENSMUST00000185163 107 ntBASIC0.86□□□□□ -2.27
Lima1Q9ERG0 Gm28344-201ENSMUST00000185704 279 ntBASIC0.86□□□□□ -2.27
Lima1Q9ERG0 Gm28506-201ENSMUST00000189937 150 ntBASIC0.86□□□□□ -2.27
Lima1Q9ERG0 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC0.86□□□□□ -2.27
Lima1Q9ERG0 Gm44301-201ENSMUST00000200362 143 ntBASIC0.86□□□□□ -2.27
Lima1Q9ERG0 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC0.86□□□□□ -2.27
Lima1Q9ERG0 AC130821.1-201ENSMUST00000221997 293 ntBASIC0.86□□□□□ -2.27
Lima1Q9ERG0 Gm46997-201ENSMUST00000222108 217 ntBASIC0.86□□□□□ -2.27
Lima1Q9ERG0 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC0.86□□□□□ -2.27
Lima1Q9ERG0 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
Lima1Q9ERG0 Gm24438-201ENSMUST00000157893 115 ntBASIC0.85□□□□□ -2.27
Lima1Q9ERG0 Gm22841-201ENSMUST00000158443 62 ntBASIC0.85□□□□□ -2.27
Lima1Q9ERG0 Gm22929-201ENSMUST00000175517 107 ntBASIC0.85□□□□□ -2.27
Lima1Q9ERG0 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC0.85□□□□□ -2.27
Lima1Q9ERG0 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC0.85□□□□□ -2.27
Lima1Q9ERG0 Gm28648-201ENSMUST00000190092 343 ntBASIC0.85□□□□□ -2.27
Lima1Q9ERG0 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC0.85□□□□□ -2.27
Lima1Q9ERG0 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC0.85□□□□□ -2.27
Lima1Q9ERG0 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC0.85□□□□□ -2.27
Lima1Q9ERG0 CT009696.1-201ENSMUST00000215745 256 ntBASIC0.85□□□□□ -2.27
Lima1Q9ERG0 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC0.85□□□□□ -2.27
Lima1Q9ERG0 Gm18696-201ENSMUST00000220103 274 ntBASIC0.85□□□□□ -2.27
Lima1Q9ERG0 Gm26224-201ENSMUST00000082506 80 ntBASIC0.85□□□□□ -2.27
Lima1Q9ERG0 Snord68-201ENSMUST00000082516 86 ntBASIC0.85□□□□□ -2.27
Lima1Q9ERG0 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC0.85□□□□□ -2.27
Lima1Q9ERG0 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.85□□□□□ -2.27
Lima1Q9ERG0 AC154515.1-201ENSMUST00000226085 2841 ntBASIC0.85□□□□□ -2.27
Lima1Q9ERG0 Gm45557-201ENSMUST00000210004 1651 ntBASIC0.84□□□□□ -2.27
Lima1Q9ERG0 Mir701-201ENSMUST00000102208 109 ntBASIC0.84□□□□□ -2.27
Lima1Q9ERG0 Gm11512-201ENSMUST00000119669 663 ntBASIC0.84□□□□□ -2.27
Lima1Q9ERG0 Gm11891-201ENSMUST00000121241 619 ntBASIC0.84□□□□□ -2.27
Lima1Q9ERG0 Gm23760-201ENSMUST00000158350 116 ntBASIC0.84□□□□□ -2.27
Lima1Q9ERG0 Gm25486-201ENSMUST00000158726 63 ntBASIC0.84□□□□□ -2.27
Lima1Q9ERG0 Gm26430-201ENSMUST00000178054 107 ntBASIC0.84□□□□□ -2.27
Lima1Q9ERG0 Gm26335-201ENSMUST00000178449 107 ntBASIC0.84□□□□□ -2.27
Lima1Q9ERG0 Gm29167-201ENSMUST00000190024 377 ntBASIC0.84□□□□□ -2.27
Lima1Q9ERG0 AC167192.2-201ENSMUST00000224794 198 ntBASIC0.84□□□□□ -2.27
Lima1Q9ERG0 Gm25079-201ENSMUST00000082529 203 ntBASIC0.84□□□□□ -2.27
Lima1Q9ERG0 Mir196b-201ENSMUST00000083509 85 ntBASIC0.84□□□□□ -2.27
Lima1Q9ERG0 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC0.84□□□□□ -2.27
Lima1Q9ERG0 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC0.84□□□□□ -2.28
Lima1Q9ERG0 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.28
Lima1Q9ERG0 Mir872-201ENSMUST00000104728 81 ntBASIC0.83□□□□□ -2.28
Lima1Q9ERG0 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
Lima1Q9ERG0 Gm13396-201ENSMUST00000120617 271 ntBASIC0.83□□□□□ -2.28
Lima1Q9ERG0 Gm25052-201ENSMUST00000122661 158 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 102 ms