Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
Scn4aQ9ER60 Gm26332-201ENSMUST00000179813 94 ntBASIC1.59□□□□□ -2.15
Scn4aQ9ER60 Gm22863-201ENSMUST00000180265 94 ntBASIC1.59□□□□□ -2.15
Scn4aQ9ER60 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Scn4aQ9ER60 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.59□□□□□ -2.16
Scn4aQ9ER60 Gm22656-201ENSMUST00000104199 171 ntBASIC1.59□□□□□ -2.16
Scn4aQ9ER60 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
Scn4aQ9ER60 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
Scn4aQ9ER60 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
Scn4aQ9ER60 Gm42774-201ENSMUST00000198854 283 ntBASIC1.59□□□□□ -2.16
Scn4aQ9ER60 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC1.59□□□□□ -2.16
Scn4aQ9ER60 Gm45456-201ENSMUST00000210841 243 ntBASIC1.59□□□□□ -2.16
Scn4aQ9ER60 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.59□□□□□ -2.16
Scn4aQ9ER60 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
Scn4aQ9ER60 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.58□□□□□ -2.16
Scn4aQ9ER60 Gm43885-201ENSMUST00000204928 2542 ntBASIC1.58□□□□□ -2.16
Scn4aQ9ER60 Mir872-201ENSMUST00000104728 81 ntBASIC1.58□□□□□ -2.16
Scn4aQ9ER60 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC1.58□□□□□ -2.16
Scn4aQ9ER60 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.58□□□□□ -2.16
Scn4aQ9ER60 Mir3086-201ENSMUST00000175072 87 ntBASIC1.58□□□□□ -2.16
Scn4aQ9ER60 Gm26430-201ENSMUST00000178054 107 ntBASIC1.58□□□□□ -2.16
Scn4aQ9ER60 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC1.58□□□□□ -2.16
Scn4aQ9ER60 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Scn4aQ9ER60 Gm34783-201ENSMUST00000209159 303 ntBASIC1.58□□□□□ -2.16
Scn4aQ9ER60 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.58□□□□□ -2.16
Scn4aQ9ER60 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.58□□□□□ -2.16
Scn4aQ9ER60 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
Scn4aQ9ER60 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Scn4aQ9ER60 Gm23718-201ENSMUST00000157350 307 ntBASIC1.57□□□□□ -2.16
Scn4aQ9ER60 Gm17113-201ENSMUST00000170118 171 ntBASIC1.57□□□□□ -2.16
Scn4aQ9ER60 Gm20438-201ENSMUST00000174441 329 ntBASIC1.57□□□□□ -2.16
Scn4aQ9ER60 Snord87-201ENSMUST00000175437 87 ntBASIC1.57□□□□□ -2.16
Scn4aQ9ER60 Gm20874-201ENSMUST00000178356 663 ntBASIC1.57□□□□□ -2.16
Scn4aQ9ER60 Gm26435-201ENSMUST00000179026 107 ntBASIC1.57□□□□□ -2.16
Scn4aQ9ER60 Mir6341-201ENSMUST00000183490 121 ntBASIC1.57□□□□□ -2.16
Scn4aQ9ER60 Gm3724-201ENSMUST00000197957 349 ntBASIC1.57□□□□□ -2.16
Scn4aQ9ER60 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC1.57□□□□□ -2.16
Scn4aQ9ER60 Gm45754-201ENSMUST00000212380 279 ntBASIC1.57□□□□□ -2.16
Scn4aQ9ER60 Gm7495-201ENSMUST00000215099 426 ntBASIC1.57□□□□□ -2.16
Scn4aQ9ER60 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC1.57□□□□□ -2.16
Scn4aQ9ER60 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.57□□□□□ -2.16
Scn4aQ9ER60 AC100209.2-201ENSMUST00000224461 451 ntBASIC1.57□□□□□ -2.16
Scn4aQ9ER60 AC110380.1-201ENSMUST00000226987 389 ntBASIC1.57□□□□□ -2.16
Scn4aQ9ER60 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.57□□□□□ -2.16
Scn4aQ9ER60 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC1.57□□□□□ -2.16
Scn4aQ9ER60 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.57□□□□□ -2.16
Scn4aQ9ER60 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
Scn4aQ9ER60 Gm12309-201ENSMUST00000119889 182 ntBASIC1.56□□□□□ -2.16
Scn4aQ9ER60 Gm24896-201ENSMUST00000122741 135 ntBASIC1.56□□□□□ -2.16
Scn4aQ9ER60 Gm22963-201ENSMUST00000157960 91 ntBASIC1.56□□□□□ -2.16
Scn4aQ9ER60 Gm24211-201ENSMUST00000158264 107 ntBASIC1.56□□□□□ -2.16
Scn4aQ9ER60 Gm25012-201ENSMUST00000158396 164 ntBASIC1.56□□□□□ -2.16
Scn4aQ9ER60 Gm24005-201ENSMUST00000158459 296 ntBASIC1.56□□□□□ -2.16
Scn4aQ9ER60 Gm24837-201ENSMUST00000158683 81 ntBASIC1.56□□□□□ -2.16
Scn4aQ9ER60 Gm25253-201ENSMUST00000179958 107 ntBASIC1.56□□□□□ -2.16
Scn4aQ9ER60 Mir6388-201ENSMUST00000184417 75 ntBASIC1.56□□□□□ -2.16
Scn4aQ9ER60 Gm29397-201ENSMUST00000185205 333 ntBASIC1.56□□□□□ -2.16
Scn4aQ9ER60 AC131720.2-201ENSMUST00000220420 431 ntBASIC1.56□□□□□ -2.16
Scn4aQ9ER60 AC166358.10-201ENSMUST00000220556 144 ntBASIC1.56□□□□□ -2.16
Scn4aQ9ER60 Gm42755-201ENSMUST00000198533 1493 ntBASIC1.56□□□□□ -2.16
Scn4aQ9ER60 Gm25759-201ENSMUST00000103988 129 ntBASIC1.56□□□□□ -2.16
Scn4aQ9ER60 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.56□□□□□ -2.16
Scn4aQ9ER60 Gm12235-201ENSMUST00000118596 170 ntBASIC1.56□□□□□ -2.16
Scn4aQ9ER60 CT485612.2-201ENSMUST00000223014 151 ntBASIC1.56□□□□□ -2.16
Scn4aQ9ER60 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC1.55□□□□□ -2.16
Scn4aQ9ER60 Gm22199-201ENSMUST00000122660 126 ntBASIC1.55□□□□□ -2.16
Scn4aQ9ER60 Gm26150-201ENSMUST00000157426 151 ntBASIC1.55□□□□□ -2.16
Scn4aQ9ER60 Gm25994-201ENSMUST00000175392 101 ntBASIC1.55□□□□□ -2.16
Scn4aQ9ER60 Gm27265-201ENSMUST00000183559 77 ntBASIC1.55□□□□□ -2.16
Scn4aQ9ER60 Gm29005-201ENSMUST00000186773 320 ntBASIC1.55□□□□□ -2.16
Scn4aQ9ER60 Gm19901-201ENSMUST00000192191 495 ntBASIC1.55□□□□□ -2.16
Scn4aQ9ER60 Mir107-201ENSMUST00000083660 87 ntBASIC1.55□□□□□ -2.16
Scn4aQ9ER60 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC1.54□□□□□ -2.16
Scn4aQ9ER60 Gm22598-201ENSMUST00000157600 127 ntBASIC1.54□□□□□ -2.16
Scn4aQ9ER60 Gm25375-201ENSMUST00000158157 135 ntBASIC1.54□□□□□ -2.16
Scn4aQ9ER60 Gm23191-201ENSMUST00000179147 107 ntBASIC1.54□□□□□ -2.16
Scn4aQ9ER60 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC1.54□□□□□ -2.16
Scn4aQ9ER60 Gm42672-201ENSMUST00000197821 352 ntBASIC1.54□□□□□ -2.16
Scn4aQ9ER60 Gm45815-201ENSMUST00000220241 146 ntBASIC1.54□□□□□ -2.16
Scn4aQ9ER60 Gm33654-201ENSMUST00000221704 215 ntBASIC1.54□□□□□ -2.16
Scn4aQ9ER60 Gm21937-201ENSMUST00000222825 218 ntBASIC1.54□□□□□ -2.16
Scn4aQ9ER60 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Scn4aQ9ER60 Mir223-201ENSMUST00000102112 110 ntBASIC1.54□□□□□ -2.16
Scn4aQ9ER60 Gm26249-201ENSMUST00000116708 118 ntBASIC1.54□□□□□ -2.16
Scn4aQ9ER60 Gm14269-201ENSMUST00000120455 306 ntBASIC1.54□□□□□ -2.16
Scn4aQ9ER60 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.54□□□□□ -2.16
Scn4aQ9ER60 Gm24191-201ENSMUST00000157977 122 ntBASIC1.54□□□□□ -2.16
Scn4aQ9ER60 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.54□□□□□ -2.16
Scn4aQ9ER60 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.54□□□□□ -2.16
Scn4aQ9ER60 Gm37845-201ENSMUST00000194977 355 ntBASIC1.54□□□□□ -2.16
Scn4aQ9ER60 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC1.54□□□□□ -2.16
Scn4aQ9ER60 Snord42a-201ENSMUST00000082606 65 ntBASIC1.54□□□□□ -2.16
Scn4aQ9ER60 Gm24895-201ENSMUST00000122742 74 ntBASIC1.53□□□□□ -2.16
Scn4aQ9ER60 Gm6956-201ENSMUST00000134724 546 ntBASIC1.53□□□□□ -2.16
Scn4aQ9ER60 Gm24348-201ENSMUST00000158710 130 ntBASIC1.53□□□□□ -2.16
Scn4aQ9ER60 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC1.53□□□□□ -2.16
Scn4aQ9ER60 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC1.53□□□□□ -2.16
Scn4aQ9ER60 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC1.53□□□□□ -2.16
Scn4aQ9ER60 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC1.53□□□□□ -2.16
Scn4aQ9ER60 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC1.53□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 165.9 ms