Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC3.36□□□□□ -1.87
Upf1Q9EPU0 Gm14652-201ENSMUST00000118479 235 ntBASIC3.36□□□□□ -1.87
Upf1Q9EPU0 Gm12513-201ENSMUST00000118617 352 ntBASIC3.36□□□□□ -1.87
Upf1Q9EPU0 Gm23889-201ENSMUST00000122689 104 ntBASIC3.36□□□□□ -1.87
Upf1Q9EPU0 Gm24379-201ENSMUST00000122695 86 ntBASIC3.36□□□□□ -1.87
Upf1Q9EPU0 Gm22281-201ENSMUST00000157198 103 ntBASIC3.36□□□□□ -1.87
Upf1Q9EPU0 Gm23535-201ENSMUST00000157542 106 ntBASIC3.36□□□□□ -1.87
Upf1Q9EPU0 Gm25424-201ENSMUST00000157612 58 ntBASIC3.36□□□□□ -1.87
Upf1Q9EPU0 Gm22803-201ENSMUST00000158049 283 ntBASIC3.36□□□□□ -1.87
Upf1Q9EPU0 Gm25223-201ENSMUST00000158200 110 ntBASIC3.36□□□□□ -1.87
Upf1Q9EPU0 Mir8096-201ENSMUST00000184526 127 ntBASIC3.36□□□□□ -1.87
Upf1Q9EPU0 Gm44425-201ENSMUST00000203739 429 ntBASIC3.36□□□□□ -1.87
Upf1Q9EPU0 Gm45445-201ENSMUST00000209586 232 ntBASIC3.36□□□□□ -1.87
Upf1Q9EPU0 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Upf1Q9EPU0 Gm22248-201ENSMUST00000082482 150 ntBASIC3.36□□□□□ -1.87
Upf1Q9EPU0 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Upf1Q9EPU0 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Upf1Q9EPU0 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.36□□□□□ -1.87
Upf1Q9EPU0 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Upf1Q9EPU0 Gm22193-201ENSMUST00000116868 76 ntBASIC3.35□□□□□ -1.87
Upf1Q9EPU0 Mir1a-2-201ENSMUST00000198520 72 ntBASIC3.35□□□□□ -1.87
Upf1Q9EPU0 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC3.35□□□□□ -1.87
Upf1Q9EPU0 CT010449.1-201ENSMUST00000220624 153 ntBASIC3.35□□□□□ -1.87
Upf1Q9EPU0 Mir124a-3-201ENSMUST00000083520 68 ntBASIC3.35□□□□□ -1.87
Upf1Q9EPU0 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Upf1Q9EPU0 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Upf1Q9EPU0 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
Upf1Q9EPU0 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Upf1Q9EPU0 Gm23653-201ENSMUST00000116751 97 ntBASIC3.34□□□□□ -1.87
Upf1Q9EPU0 Gm14491-201ENSMUST00000121919 199 ntBASIC3.34□□□□□ -1.87
Upf1Q9EPU0 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.34□□□□□ -1.87
Upf1Q9EPU0 Gm24177-201ENSMUST00000158927 131 ntBASIC3.34□□□□□ -1.87
Upf1Q9EPU0 Gm24082-201ENSMUST00000175175 83 ntBASIC3.34□□□□□ -1.87
Upf1Q9EPU0 Gm27285-201ENSMUST00000183875 127 ntBASIC3.34□□□□□ -1.87
Upf1Q9EPU0 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC3.34□□□□□ -1.87
Upf1Q9EPU0 Gm37624-201ENSMUST00000193751 219 ntBASIC3.34□□□□□ -1.87
Upf1Q9EPU0 Gm43563-201ENSMUST00000196761 198 ntBASIC3.34□□□□□ -1.87
Upf1Q9EPU0 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC3.34□□□□□ -1.87
Upf1Q9EPU0 Gm44564-201ENSMUST00000207985 180 ntBASIC3.34□□□□□ -1.87
Upf1Q9EPU0 Gm22972-201ENSMUST00000083297 131 ntBASIC3.34□□□□□ -1.87
Upf1Q9EPU0 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Upf1Q9EPU0 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Upf1Q9EPU0 Gm44114-201ENSMUST00000203270 2727 ntBASIC3.34□□□□□ -1.88
Upf1Q9EPU0 Gm38071-201ENSMUST00000195792 3378 ntBASIC3.34□□□□□ -1.88
Upf1Q9EPU0 Gm13862-201ENSMUST00000121220 197 ntBASIC3.33□□□□□ -1.88
Upf1Q9EPU0 Gm13797-201ENSMUST00000121792 120 ntBASIC3.33□□□□□ -1.88
Upf1Q9EPU0 DQ267100-201ENSMUST00000122600 72 ntBASIC3.33□□□□□ -1.88
Upf1Q9EPU0 Gm25494-201ENSMUST00000158143 100 ntBASIC3.33□□□□□ -1.88
Upf1Q9EPU0 Gm25488-201ENSMUST00000158728 118 ntBASIC3.33□□□□□ -1.88
Upf1Q9EPU0 Gm17528-201ENSMUST00000171026 239 ntBASIC3.33□□□□□ -1.88
Upf1Q9EPU0 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Upf1Q9EPU0 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Upf1Q9EPU0 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC3.33□□□□□ -1.88
Upf1Q9EPU0 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC3.33□□□□□ -1.88
Upf1Q9EPU0 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC3.33□□□□□ -1.88
Upf1Q9EPU0 CU062626.2-201ENSMUST00000223953 274 ntBASIC3.33□□□□□ -1.88
Upf1Q9EPU0 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.33□□□□□ -1.88
Upf1Q9EPU0 Mir322-201ENSMUST00000083484 95 ntBASIC3.33□□□□□ -1.88
Upf1Q9EPU0 Mir146-201ENSMUST00000083667 65 ntBASIC3.33□□□□□ -1.88
Upf1Q9EPU0 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Upf1Q9EPU0 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Upf1Q9EPU0 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Upf1Q9EPU0 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.33□□□□□ -1.88
Upf1Q9EPU0 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Upf1Q9EPU0 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.32□□□□□ -1.88
Upf1Q9EPU0 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Upf1Q9EPU0 Gm12449-201ENSMUST00000117572 234 ntBASIC3.32□□□□□ -1.88
Upf1Q9EPU0 Gm11253-201ENSMUST00000118486 201 ntBASIC3.32□□□□□ -1.88
Upf1Q9EPU0 Gm24896-201ENSMUST00000122741 135 ntBASIC3.32□□□□□ -1.88
Upf1Q9EPU0 Gm24440-201ENSMUST00000157236 63 ntBASIC3.32□□□□□ -1.88
Upf1Q9EPU0 Gm24512-201ENSMUST00000174963 65 ntBASIC3.32□□□□□ -1.88
Upf1Q9EPU0 Gm23289-201ENSMUST00000175615 108 ntBASIC3.32□□□□□ -1.88
Upf1Q9EPU0 Gm27399-201ENSMUST00000184250 78 ntBASIC3.32□□□□□ -1.88
Upf1Q9EPU0 Gm37377-201ENSMUST00000191733 304 ntBASIC3.32□□□□□ -1.88
Upf1Q9EPU0 Mir1291-201ENSMUST00000199842 117 ntBASIC3.32□□□□□ -1.88
Upf1Q9EPU0 CT033785.1-201ENSMUST00000224872 272 ntBASIC3.32□□□□□ -1.88
Upf1Q9EPU0 Snora34-201ENSMUST00000083402 138 ntBASIC3.32□□□□□ -1.88
Upf1Q9EPU0 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Upf1Q9EPU0 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Upf1Q9EPU0 Gm8935-202ENSMUST00000105727 1959 ntBASIC3.31□□□□□ -1.88
Upf1Q9EPU0 Gm25914-201ENSMUST00000157618 153 ntBASIC3.31□□□□□ -1.88
Upf1Q9EPU0 Gm5224-201ENSMUST00000183060 350 ntBASIC3.31□□□□□ -1.88
Upf1Q9EPU0 CT030687.1-201ENSMUST00000221854 162 ntBASIC3.31□□□□□ -1.88
Upf1Q9EPU0 AC158982.2-201ENSMUST00000226283 184 ntBASIC3.31□□□□□ -1.88
Upf1Q9EPU0 Gm25634-201ENSMUST00000082667 105 ntBASIC3.31□□□□□ -1.88
Upf1Q9EPU0 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Upf1Q9EPU0 Gm13885-201ENSMUST00000117569 187 ntBASIC3.3□□□□□ -1.88
Upf1Q9EPU0 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC3.3□□□□□ -1.88
Upf1Q9EPU0 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Upf1Q9EPU0 Gm25933-201ENSMUST00000178943 108 ntBASIC3.3□□□□□ -1.88
Upf1Q9EPU0 Mir7242-201ENSMUST00000183710 79 ntBASIC3.3□□□□□ -1.88
Upf1Q9EPU0 Gm27898-201ENSMUST00000183987 80 ntBASIC3.3□□□□□ -1.88
Upf1Q9EPU0 Mir7225-201ENSMUST00000184178 54 ntBASIC3.3□□□□□ -1.88
Upf1Q9EPU0 Mir6997-201ENSMUST00000184313 71 ntBASIC3.3□□□□□ -1.88
Upf1Q9EPU0 Gm44477-201ENSMUST00000199661 110 ntBASIC3.3□□□□□ -1.88
Upf1Q9EPU0 Snora33-201ENSMUST00000093556 129 ntBASIC3.3□□□□□ -1.88
Upf1Q9EPU0 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.3□□□□□ -1.88
Upf1Q9EPU0 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Upf1Q9EPU0 Gm42862-201ENSMUST00000197494 2621 ntBASIC3.29□□□□□ -1.88
Upf1Q9EPU0 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 96 ms