Protein–RNA interactions for Protein: Q9D706

Rpap3, RNA polymerase II-associated protein 3, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap3Q9D706 AC160115.1-201ENSMUST00000224678 1574 ntBASIC1.93□□□□□ -2.1
Rpap3Q9D706 Gm22761-201ENSMUST00000102278 96 ntBASIC1.93□□□□□ -2.1
Rpap3Q9D706 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
Rpap3Q9D706 Gm13992-201ENSMUST00000120558 156 ntBASIC1.93□□□□□ -2.1
Rpap3Q9D706 Gm25279-201ENSMUST00000122608 133 ntBASIC1.93□□□□□ -2.1
Rpap3Q9D706 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Rpap3Q9D706 Gm24783-201ENSMUST00000157639 100 ntBASIC1.93□□□□□ -2.1
Rpap3Q9D706 Gm24504-201ENSMUST00000157679 100 ntBASIC1.93□□□□□ -2.1
Rpap3Q9D706 Gm23289-201ENSMUST00000175615 108 ntBASIC1.93□□□□□ -2.1
Rpap3Q9D706 Gm24656-201ENSMUST00000177548 132 ntBASIC1.93□□□□□ -2.1
Rpap3Q9D706 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Rpap3Q9D706 Gm20144-201ENSMUST00000203031 165 ntBASIC1.93□□□□□ -2.1
Rpap3Q9D706 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.93□□□□□ -2.1
Rpap3Q9D706 AC164117.2-201ENSMUST00000222090 327 ntBASIC1.93□□□□□ -2.1
Rpap3Q9D706 Gm23404-201ENSMUST00000082543 97 ntBASIC1.93□□□□□ -2.1
Rpap3Q9D706 Snord42a-201ENSMUST00000082606 65 ntBASIC1.93□□□□□ -2.1
Rpap3Q9D706 Mir32-201ENSMUST00000083610 70 ntBASIC1.93□□□□□ -2.1
Rpap3Q9D706 Gm26329-201ENSMUST00000093723 110 ntBASIC1.93□□□□□ -2.1
Rpap3Q9D706 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Rpap3Q9D706 Gm25938-201ENSMUST00000104139 166 ntBASIC1.92□□□□□ -2.1
Rpap3Q9D706 Gm23013-201ENSMUST00000104146 106 ntBASIC1.92□□□□□ -2.1
Rpap3Q9D706 Gm22027-201ENSMUST00000122737 127 ntBASIC1.92□□□□□ -2.1
Rpap3Q9D706 Gm24632-201ENSMUST00000122770 323 ntBASIC1.92□□□□□ -2.1
Rpap3Q9D706 Gm22598-201ENSMUST00000157600 127 ntBASIC1.92□□□□□ -2.1
Rpap3Q9D706 Gm24572-201ENSMUST00000175505 88 ntBASIC1.92□□□□□ -2.1
Rpap3Q9D706 Gm7258-201ENSMUST00000179317 300 ntBASIC1.92□□□□□ -2.1
Rpap3Q9D706 Gm24638-201ENSMUST00000179807 132 ntBASIC1.92□□□□□ -2.1
Rpap3Q9D706 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.92□□□□□ -2.1
Rpap3Q9D706 Gm29229-201ENSMUST00000188874 323 ntBASIC1.92□□□□□ -2.1
Rpap3Q9D706 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.92□□□□□ -2.1
Rpap3Q9D706 Gm44384-201ENSMUST00000200208 114 ntBASIC1.92□□□□□ -2.1
Rpap3Q9D706 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.92□□□□□ -2.1
Rpap3Q9D706 Gm22364-201ENSMUST00000083097 98 ntBASIC1.92□□□□□ -2.1
Rpap3Q9D706 Gm15102-201ENSMUST00000118740 1502 ntBASIC1.91□□□□□ -2.1
Rpap3Q9D706 Gm15101-201ENSMUST00000178818 1502 ntBASIC1.91□□□□□ -2.1
Rpap3Q9D706 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.91□□□□□ -2.1
Rpap3Q9D706 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Rpap3Q9D706 Gm24984-201ENSMUST00000104454 133 ntBASIC1.91□□□□□ -2.1
Rpap3Q9D706 Mir3096-201ENSMUST00000116685 71 ntBASIC1.91□□□□□ -2.1
Rpap3Q9D706 Gm14782-201ENSMUST00000120151 195 ntBASIC1.91□□□□□ -2.1
Rpap3Q9D706 Gm23390-201ENSMUST00000157393 106 ntBASIC1.91□□□□□ -2.1
Rpap3Q9D706 Gm22556-201ENSMUST00000157803 100 ntBASIC1.91□□□□□ -2.1
Rpap3Q9D706 Gm37918-201ENSMUST00000192071 120 ntBASIC1.91□□□□□ -2.1
Rpap3Q9D706 Gm43976-201ENSMUST00000203637 235 ntBASIC1.91□□□□□ -2.1
Rpap3Q9D706 Gm35736-201ENSMUST00000203681 313 ntBASIC1.91□□□□□ -2.1
Rpap3Q9D706 Gm44687-201ENSMUST00000204975 235 ntBASIC1.91□□□□□ -2.1
Rpap3Q9D706 Gm44654-201ENSMUST00000208052 329 ntBASIC1.91□□□□□ -2.1
Rpap3Q9D706 AC164086.1-201ENSMUST00000221038 289 ntBASIC1.91□□□□□ -2.1
Rpap3Q9D706 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.91□□□□□ -2.1
Rpap3Q9D706 Gm25789-201ENSMUST00000083294 76 ntBASIC1.91□□□□□ -2.1
Rpap3Q9D706 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
Rpap3Q9D706 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Rpap3Q9D706 Mir873a-201ENSMUST00000104863 77 ntBASIC1.9□□□□□ -2.11
Rpap3Q9D706 Gm12143-201ENSMUST00000119666 332 ntBASIC1.9□□□□□ -2.11
Rpap3Q9D706 Gm22085-201ENSMUST00000158344 110 ntBASIC1.9□□□□□ -2.11
Rpap3Q9D706 Gm27898-201ENSMUST00000183987 80 ntBASIC1.9□□□□□ -2.11
Rpap3Q9D706 Gm27421-201ENSMUST00000184729 167 ntBASIC1.9□□□□□ -2.11
Rpap3Q9D706 Gm42834-201ENSMUST00000196845 256 ntBASIC1.9□□□□□ -2.11
Rpap3Q9D706 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Rpap3Q9D706 Mir148b-201ENSMUST00000083626 97 ntBASIC1.9□□□□□ -2.11
Rpap3Q9D706 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Rpap3Q9D706 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Rpap3Q9D706 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Rpap3Q9D706 Gm25671-201ENSMUST00000178612 105 ntBASIC1.89□□□□□ -2.11
Rpap3Q9D706 Gm23307-201ENSMUST00000179167 105 ntBASIC1.89□□□□□ -2.11
Rpap3Q9D706 Gm25286-201ENSMUST00000179790 105 ntBASIC1.89□□□□□ -2.11
Rpap3Q9D706 Mir6379-201ENSMUST00000183392 115 ntBASIC1.89□□□□□ -2.11
Rpap3Q9D706 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC1.89□□□□□ -2.11
Rpap3Q9D706 Gm28912-201ENSMUST00000189001 234 ntBASIC1.89□□□□□ -2.11
Rpap3Q9D706 Gm43250-201ENSMUST00000196536 273 ntBASIC1.89□□□□□ -2.11
Rpap3Q9D706 Gm43431-201ENSMUST00000198577 340 ntBASIC1.89□□□□□ -2.11
Rpap3Q9D706 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.89□□□□□ -2.11
Rpap3Q9D706 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Rpap3Q9D706 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.88□□□□□ -2.11
Rpap3Q9D706 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Rpap3Q9D706 Gm14937-201ENSMUST00000119709 208 ntBASIC1.88□□□□□ -2.11
Rpap3Q9D706 Gm6025-201ENSMUST00000121517 201 ntBASIC1.88□□□□□ -2.11
Rpap3Q9D706 Gm23656-201ENSMUST00000122626 112 ntBASIC1.88□□□□□ -2.11
Rpap3Q9D706 Gm24076-201ENSMUST00000158179 94 ntBASIC1.88□□□□□ -2.11
Rpap3Q9D706 Mir6419-201ENSMUST00000184784 113 ntBASIC1.88□□□□□ -2.11
Rpap3Q9D706 Gm28717-201ENSMUST00000189950 315 ntBASIC1.88□□□□□ -2.11
Rpap3Q9D706 Gm37713-201ENSMUST00000191746 198 ntBASIC1.88□□□□□ -2.11
Rpap3Q9D706 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.88□□□□□ -2.11
Rpap3Q9D706 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC1.88□□□□□ -2.11
Rpap3Q9D706 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.88□□□□□ -2.11
Rpap3Q9D706 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Rpap3Q9D706 Snora3-201ENSMUST00000083082 132 ntBASIC1.88□□□□□ -2.11
Rpap3Q9D706 Gm25937-201ENSMUST00000083912 107 ntBASIC1.88□□□□□ -2.11
Rpap3Q9D706 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Rpap3Q9D706 Mir301b-201ENSMUST00000102333 97 ntBASIC1.87□□□□□ -2.11
Rpap3Q9D706 Gm22021-201ENSMUST00000104353 107 ntBASIC1.87□□□□□ -2.11
Rpap3Q9D706 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Rpap3Q9D706 Gm15162-201ENSMUST00000119325 283 ntBASIC1.87□□□□□ -2.11
Rpap3Q9D706 Gm13518-201ENSMUST00000120018 233 ntBASIC1.87□□□□□ -2.11
Rpap3Q9D706 Gm25914-201ENSMUST00000157618 153 ntBASIC1.87□□□□□ -2.11
Rpap3Q9D706 Gm22843-201ENSMUST00000157710 134 ntBASIC1.87□□□□□ -2.11
Rpap3Q9D706 Gm22665-201ENSMUST00000158720 275 ntBASIC1.87□□□□□ -2.11
Rpap3Q9D706 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.87□□□□□ -2.11
Rpap3Q9D706 Mir3057-201ENSMUST00000175040 91 ntBASIC1.87□□□□□ -2.11
Rpap3Q9D706 Gm45754-201ENSMUST00000212380 279 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms