Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Mir544-201ENSMUST00000103813 78 ntBASIC0.93□□□□□ -2.26
Ccdc3Q9D6Y1 Gm25507-201ENSMUST00000116981 144 ntBASIC0.93□□□□□ -2.26
Ccdc3Q9D6Y1 Gm13992-201ENSMUST00000120558 156 ntBASIC0.93□□□□□ -2.26
Ccdc3Q9D6Y1 Gm25052-201ENSMUST00000122661 158 ntBASIC0.93□□□□□ -2.26
Ccdc3Q9D6Y1 Gm25054-201ENSMUST00000157370 97 ntBASIC0.93□□□□□ -2.26
Ccdc3Q9D6Y1 Gm23411-201ENSMUST00000157988 62 ntBASIC0.93□□□□□ -2.26
Ccdc3Q9D6Y1 Gm16038-201ENSMUST00000159317 193 ntBASIC0.93□□□□□ -2.26
Ccdc3Q9D6Y1 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
Ccdc3Q9D6Y1 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC0.93□□□□□ -2.26
Ccdc3Q9D6Y1 Gm26501-201ENSMUST00000178307 107 ntBASIC0.93□□□□□ -2.26
Ccdc3Q9D6Y1 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC0.93□□□□□ -2.26
Ccdc3Q9D6Y1 Gm27660-201ENSMUST00000184028 208 ntBASIC0.93□□□□□ -2.26
Ccdc3Q9D6Y1 Gm38261-201ENSMUST00000192608 316 ntBASIC0.93□□□□□ -2.26
Ccdc3Q9D6Y1 Gm44491-201ENSMUST00000196794 96 ntBASIC0.93□□□□□ -2.26
Ccdc3Q9D6Y1 Gm44830-201ENSMUST00000207667 584 ntBASIC0.93□□□□□ -2.26
Ccdc3Q9D6Y1 AL772265.1-201ENSMUST00000214379 305 ntBASIC0.93□□□□□ -2.26
Ccdc3Q9D6Y1 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC0.93□□□□□ -2.26
Ccdc3Q9D6Y1 AC122834.1-201ENSMUST00000227182 425 ntBASIC0.93□□□□□ -2.26
Ccdc3Q9D6Y1 Gm25079-201ENSMUST00000082529 203 ntBASIC0.93□□□□□ -2.26
Ccdc3Q9D6Y1 Gm24623-201ENSMUST00000082616 194 ntBASIC0.93□□□□□ -2.26
Ccdc3Q9D6Y1 Gm24431-201ENSMUST00000104073 66 ntBASIC0.92□□□□□ -2.26
Ccdc3Q9D6Y1 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC0.92□□□□□ -2.26
Ccdc3Q9D6Y1 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC0.92□□□□□ -2.26
Ccdc3Q9D6Y1 Mir6380-201ENSMUST00000184334 81 ntBASIC0.92□□□□□ -2.26
Ccdc3Q9D6Y1 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC0.92□□□□□ -2.26
Ccdc3Q9D6Y1 Gm18185-201ENSMUST00000186725 667 ntBASIC0.92□□□□□ -2.26
Ccdc3Q9D6Y1 Gm29013-201ENSMUST00000187431 237 ntBASIC0.92□□□□□ -2.26
Ccdc3Q9D6Y1 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC0.92□□□□□ -2.26
Ccdc3Q9D6Y1 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC0.92□□□□□ -2.26
Ccdc3Q9D6Y1 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC0.92□□□□□ -2.26
Ccdc3Q9D6Y1 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC0.92□□□□□ -2.26
Ccdc3Q9D6Y1 Gm25357-201ENSMUST00000082745 72 ntBASIC0.92□□□□□ -2.26
Ccdc3Q9D6Y1 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC0.92□□□□□ -2.26
Ccdc3Q9D6Y1 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
Ccdc3Q9D6Y1 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
Ccdc3Q9D6Y1 Gm23535-201ENSMUST00000157542 106 ntBASIC0.91□□□□□ -2.26
Ccdc3Q9D6Y1 Gm25901-201ENSMUST00000158494 130 ntBASIC0.91□□□□□ -2.26
Ccdc3Q9D6Y1 Gm25491-201ENSMUST00000158733 308 ntBASIC0.91□□□□□ -2.26
Ccdc3Q9D6Y1 Gm22308-201ENSMUST00000177609 107 ntBASIC0.91□□□□□ -2.26
Ccdc3Q9D6Y1 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
Ccdc3Q9D6Y1 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC0.91□□□□□ -2.26
Ccdc3Q9D6Y1 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC0.91□□□□□ -2.26
Ccdc3Q9D6Y1 Gm19901-201ENSMUST00000192191 495 ntBASIC0.91□□□□□ -2.26
Ccdc3Q9D6Y1 Gm18113-201ENSMUST00000220630 303 ntBASIC0.91□□□□□ -2.26
Ccdc3Q9D6Y1 Gm24261-201ENSMUST00000083744 104 ntBASIC0.91□□□□□ -2.26
Ccdc3Q9D6Y1 Gm25683-201ENSMUST00000083940 131 ntBASIC0.91□□□□□ -2.26
Ccdc3Q9D6Y1 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
Ccdc3Q9D6Y1 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.91□□□□□ -2.26
Ccdc3Q9D6Y1 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC0.9□□□□□ -2.26
Ccdc3Q9D6Y1 Gm14914-201ENSMUST00000117576 2031 ntBASIC0.9□□□□□ -2.27
Ccdc3Q9D6Y1 Gm22771-201ENSMUST00000104449 91 ntBASIC0.9□□□□□ -2.27
Ccdc3Q9D6Y1 Gm12449-201ENSMUST00000117572 234 ntBASIC0.9□□□□□ -2.27
Ccdc3Q9D6Y1 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC0.9□□□□□ -2.27
Ccdc3Q9D6Y1 Gm26149-201ENSMUST00000157432 108 ntBASIC0.9□□□□□ -2.27
Ccdc3Q9D6Y1 Gm27957-201ENSMUST00000184054 127 ntBASIC0.9□□□□□ -2.27
Ccdc3Q9D6Y1 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC0.9□□□□□ -2.27
Ccdc3Q9D6Y1 Gm29661-201ENSMUST00000186781 315 ntBASIC0.9□□□□□ -2.27
Ccdc3Q9D6Y1 Gm29308-201ENSMUST00000188863 315 ntBASIC0.9□□□□□ -2.27
Ccdc3Q9D6Y1 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
Ccdc3Q9D6Y1 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC0.9□□□□□ -2.27
Ccdc3Q9D6Y1 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
Ccdc3Q9D6Y1 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC0.9□□□□□ -2.27
Ccdc3Q9D6Y1 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
Ccdc3Q9D6Y1 Gm15529-201ENSMUST00000121833 994 ntBASIC0.89□□□□□ -2.27
Ccdc3Q9D6Y1 Gm25102-201ENSMUST00000122479 112 ntBASIC0.89□□□□□ -2.27
Ccdc3Q9D6Y1 Gm25543-201ENSMUST00000122678 312 ntBASIC0.89□□□□□ -2.27
Ccdc3Q9D6Y1 Gm24438-201ENSMUST00000157893 115 ntBASIC0.89□□□□□ -2.27
Ccdc3Q9D6Y1 Gm24726-201ENSMUST00000158232 121 ntBASIC0.89□□□□□ -2.27
Ccdc3Q9D6Y1 Gm18588-201ENSMUST00000177308 492 ntBASIC0.89□□□□□ -2.27
Ccdc3Q9D6Y1 Gm26435-201ENSMUST00000179026 107 ntBASIC0.89□□□□□ -2.27
Ccdc3Q9D6Y1 Gm25253-201ENSMUST00000179958 107 ntBASIC0.89□□□□□ -2.27
Ccdc3Q9D6Y1 Gm20118-201ENSMUST00000187207 162 ntBASIC0.89□□□□□ -2.27
Ccdc3Q9D6Y1 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC0.89□□□□□ -2.27
Ccdc3Q9D6Y1 Gm38395-201ENSMUST00000199904 830 ntBASIC0.89□□□□□ -2.27
Ccdc3Q9D6Y1 Gm45878-201ENSMUST00000211839 241 ntBASIC0.89□□□□□ -2.27
Ccdc3Q9D6Y1 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
Ccdc3Q9D6Y1 Gm23140-201ENSMUST00000082487 107 ntBASIC0.89□□□□□ -2.27
Ccdc3Q9D6Y1 Gm23515-201ENSMUST00000082829 107 ntBASIC0.89□□□□□ -2.27
Ccdc3Q9D6Y1 Gm24494-201ENSMUST00000083804 81 ntBASIC0.89□□□□□ -2.27
Ccdc3Q9D6Y1 Gm25207-201ENSMUST00000093745 107 ntBASIC0.89□□□□□ -2.27
Ccdc3Q9D6Y1 Gm18795-202ENSMUST00000223373 2920 ntBASIC0.89□□□□□ -2.27
Ccdc3Q9D6Y1 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC0.88□□□□□ -2.27
Ccdc3Q9D6Y1 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
Ccdc3Q9D6Y1 Gm22469-201ENSMUST00000104118 133 ntBASIC0.88□□□□□ -2.27
Ccdc3Q9D6Y1 Gm6829-201ENSMUST00000119858 360 ntBASIC0.88□□□□□ -2.27
Ccdc3Q9D6Y1 Gm11358-201ENSMUST00000122310 373 ntBASIC0.88□□□□□ -2.27
Ccdc3Q9D6Y1 Gm26393-201ENSMUST00000157625 129 ntBASIC0.88□□□□□ -2.27
Ccdc3Q9D6Y1 Gm25166-201ENSMUST00000158909 111 ntBASIC0.88□□□□□ -2.27
Ccdc3Q9D6Y1 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC0.88□□□□□ -2.27
Ccdc3Q9D6Y1 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC0.88□□□□□ -2.27
Ccdc3Q9D6Y1 Gm11392-201ENSMUST00000181419 710 ntBASIC0.88□□□□□ -2.27
Ccdc3Q9D6Y1 Gm37693-201ENSMUST00000194562 234 ntBASIC0.88□□□□□ -2.27
Ccdc3Q9D6Y1 Gm42533-201ENSMUST00000196247 157 ntBASIC0.88□□□□□ -2.27
Ccdc3Q9D6Y1 Gm43993-201ENSMUST00000203972 247 ntBASIC0.88□□□□□ -2.27
Ccdc3Q9D6Y1 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC0.88□□□□□ -2.27
Ccdc3Q9D6Y1 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC0.88□□□□□ -2.27
Ccdc3Q9D6Y1 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC0.88□□□□□ -2.27
Ccdc3Q9D6Y1 AC154484.1-201ENSMUST00000227311 771 ntBASIC0.88□□□□□ -2.27
Ccdc3Q9D6Y1 Gm5899-201ENSMUST00000071770 270 ntBASIC0.88□□□□□ -2.27
Ccdc3Q9D6Y1 Snord1a-201ENSMUST00000083160 74 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 95 ms