Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
Vps28Q9D1C8 Gm44491-201ENSMUST00000196794 96 ntBASIC1.99□□□□□ -2.09
Vps28Q9D1C8 Mir7118-201ENSMUST00000197760 61 ntBASIC1.99□□□□□ -2.09
Vps28Q9D1C8 Gm44473-201ENSMUST00000204039 152 ntBASIC1.99□□□□□ -2.09
Vps28Q9D1C8 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.99□□□□□ -2.09
Vps28Q9D1C8 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.99□□□□□ -2.09
Vps28Q9D1C8 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.98□□□□□ -2.09
Vps28Q9D1C8 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.98□□□□□ -2.09
Vps28Q9D1C8 Gm23950-201ENSMUST00000104026 129 ntBASIC1.98□□□□□ -2.09
Vps28Q9D1C8 Gm12143-201ENSMUST00000119666 332 ntBASIC1.98□□□□□ -2.09
Vps28Q9D1C8 Gm24630-201ENSMUST00000122768 106 ntBASIC1.98□□□□□ -2.09
Vps28Q9D1C8 Gm23172-201ENSMUST00000157160 124 ntBASIC1.98□□□□□ -2.09
Vps28Q9D1C8 Gm22217-201ENSMUST00000157556 313 ntBASIC1.98□□□□□ -2.09
Vps28Q9D1C8 Gm22803-201ENSMUST00000158049 283 ntBASIC1.98□□□□□ -2.09
Vps28Q9D1C8 Gm25371-201ENSMUST00000158162 101 ntBASIC1.98□□□□□ -2.09
Vps28Q9D1C8 Gm23854-201ENSMUST00000158378 108 ntBASIC1.98□□□□□ -2.09
Vps28Q9D1C8 Gm23181-201ENSMUST00000158685 110 ntBASIC1.98□□□□□ -2.09
Vps28Q9D1C8 Gm24510-201ENSMUST00000174965 94 ntBASIC1.98□□□□□ -2.09
Vps28Q9D1C8 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.98□□□□□ -2.09
Vps28Q9D1C8 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.98□□□□□ -2.09
Vps28Q9D1C8 AC132437.1-201ENSMUST00000218308 320 ntBASIC1.98□□□□□ -2.09
Vps28Q9D1C8 Gm25078-201ENSMUST00000082530 107 ntBASIC1.98□□□□□ -2.09
Vps28Q9D1C8 Gm24355-201ENSMUST00000082858 122 ntBASIC1.98□□□□□ -2.09
Vps28Q9D1C8 Gm10360-201ENSMUST00000097219 272 ntBASIC1.98□□□□□ -2.09
Vps28Q9D1C8 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Vps28Q9D1C8 Gm22750-201ENSMUST00000102076 103 ntBASIC1.97□□□□□ -2.09
Vps28Q9D1C8 Gm11572-201ENSMUST00000119164 120 ntBASIC1.97□□□□□ -2.09
Vps28Q9D1C8 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC1.97□□□□□ -2.09
Vps28Q9D1C8 Gm17919-201ENSMUST00000173344 312 ntBASIC1.97□□□□□ -2.09
Vps28Q9D1C8 Mir6406-201ENSMUST00000183592 120 ntBASIC1.97□□□□□ -2.09
Vps28Q9D1C8 Mir6901-201ENSMUST00000185062 62 ntBASIC1.97□□□□□ -2.09
Vps28Q9D1C8 Gm42834-201ENSMUST00000196845 256 ntBASIC1.97□□□□□ -2.09
Vps28Q9D1C8 Gm45150-201ENSMUST00000206051 467 ntBASIC1.97□□□□□ -2.09
Vps28Q9D1C8 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.97□□□□□ -2.09
Vps28Q9D1C8 mt-Tr-201ENSMUST00000082412 68 ntBASIC1.97□□□□□ -2.09
Vps28Q9D1C8 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.97□□□□□ -2.09
Vps28Q9D1C8 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Vps28Q9D1C8 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
Vps28Q9D1C8 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.96□□□□□ -2.1
Vps28Q9D1C8 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1.96□□□□□ -2.1
Vps28Q9D1C8 Gm24858-201ENSMUST00000158058 323 ntBASIC1.96□□□□□ -2.1
Vps28Q9D1C8 Gm16162-201ENSMUST00000162296 297 ntBASIC1.96□□□□□ -2.1
Vps28Q9D1C8 Gm22114-201ENSMUST00000177756 107 ntBASIC1.96□□□□□ -2.1
Vps28Q9D1C8 Gm25450-201ENSMUST00000179144 107 ntBASIC1.96□□□□□ -2.1
Vps28Q9D1C8 Mir7683-201ENSMUST00000183842 61 ntBASIC1.96□□□□□ -2.1
Vps28Q9D1C8 Gm35736-201ENSMUST00000203681 313 ntBASIC1.96□□□□□ -2.1
Vps28Q9D1C8 AC164086.1-201ENSMUST00000221038 289 ntBASIC1.96□□□□□ -2.1
Vps28Q9D1C8 Gm22294-201ENSMUST00000083308 104 ntBASIC1.96□□□□□ -2.1
Vps28Q9D1C8 AC154515.1-201ENSMUST00000226085 2841 ntBASIC1.96□□□□□ -2.1
Vps28Q9D1C8 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Vps28Q9D1C8 Gm13339-201ENSMUST00000120651 510 ntBASIC1.95□□□□□ -2.1
Vps28Q9D1C8 Gm15861-201ENSMUST00000120979 339 ntBASIC1.95□□□□□ -2.1
Vps28Q9D1C8 Gm24783-201ENSMUST00000157639 100 ntBASIC1.95□□□□□ -2.1
Vps28Q9D1C8 Gm23759-201ENSMUST00000158351 268 ntBASIC1.95□□□□□ -2.1
Vps28Q9D1C8 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.95□□□□□ -2.1
Vps28Q9D1C8 Mir7014-201ENSMUST00000183853 63 ntBASIC1.95□□□□□ -2.1
Vps28Q9D1C8 Gm32175-201ENSMUST00000193641 346 ntBASIC1.95□□□□□ -2.1
Vps28Q9D1C8 Gm43220-201ENSMUST00000199299 282 ntBASIC1.95□□□□□ -2.1
Vps28Q9D1C8 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC1.95□□□□□ -2.1
Vps28Q9D1C8 Gm45907-201ENSMUST00000213023 193 ntBASIC1.95□□□□□ -2.1
Vps28Q9D1C8 Gm18617-201ENSMUST00000222311 259 ntBASIC1.95□□□□□ -2.1
Vps28Q9D1C8 Gm24151-201ENSMUST00000082758 141 ntBASIC1.95□□□□□ -2.1
Vps28Q9D1C8 Gm26111-201ENSMUST00000083969 106 ntBASIC1.95□□□□□ -2.1
Vps28Q9D1C8 Gm24163-201ENSMUST00000093660 132 ntBASIC1.95□□□□□ -2.1
Vps28Q9D1C8 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
Vps28Q9D1C8 Gm25848-201ENSMUST00000116790 144 ntBASIC1.94□□□□□ -2.1
Vps28Q9D1C8 Gm24632-201ENSMUST00000122770 323 ntBASIC1.94□□□□□ -2.1
Vps28Q9D1C8 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.94□□□□□ -2.1
Vps28Q9D1C8 Gm26914-201ENSMUST00000182262 223 ntBASIC1.94□□□□□ -2.1
Vps28Q9D1C8 Gm29657-201ENSMUST00000189807 342 ntBASIC1.94□□□□□ -2.1
Vps28Q9D1C8 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Vps28Q9D1C8 Gm45296-201ENSMUST00000209625 205 ntBASIC1.94□□□□□ -2.1
Vps28Q9D1C8 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.94□□□□□ -2.1
Vps28Q9D1C8 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
Vps28Q9D1C8 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Vps28Q9D1C8 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
Vps28Q9D1C8 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC1.93□□□□□ -2.1
Vps28Q9D1C8 Gm15067-201ENSMUST00000119534 156 ntBASIC1.93□□□□□ -2.1
Vps28Q9D1C8 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC1.93□□□□□ -2.1
Vps28Q9D1C8 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.93□□□□□ -2.1
Vps28Q9D1C8 Gm23474-201ENSMUST00000158884 75 ntBASIC1.93□□□□□ -2.1
Vps28Q9D1C8 Mir6379-201ENSMUST00000183392 115 ntBASIC1.93□□□□□ -2.1
Vps28Q9D1C8 Gm43512-201ENSMUST00000198495 176 ntBASIC1.93□□□□□ -2.1
Vps28Q9D1C8 Gm7240-201ENSMUST00000220769 664 ntBASIC1.93□□□□□ -2.1
Vps28Q9D1C8 Gm11351-202ENSMUST00000225724 478 ntBASIC1.93□□□□□ -2.1
Vps28Q9D1C8 AC158981.3-202ENSMUST00000228906 523 ntBASIC1.93□□□□□ -2.1
Vps28Q9D1C8 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Vps28Q9D1C8 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
Vps28Q9D1C8 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
Vps28Q9D1C8 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Vps28Q9D1C8 Gm23109-201ENSMUST00000116867 126 ntBASIC1.92□□□□□ -2.1
Vps28Q9D1C8 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.92□□□□□ -2.1
Vps28Q9D1C8 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
Vps28Q9D1C8 Gm24478-201ENSMUST00000157439 158 ntBASIC1.92□□□□□ -2.1
Vps28Q9D1C8 Gm22215-201ENSMUST00000157558 96 ntBASIC1.92□□□□□ -2.1
Vps28Q9D1C8 Gm29512-201ENSMUST00000185544 315 ntBASIC1.92□□□□□ -2.1
Vps28Q9D1C8 Gm28110-201ENSMUST00000185782 315 ntBASIC1.92□□□□□ -2.1
Vps28Q9D1C8 Gm29057-201ENSMUST00000186468 315 ntBASIC1.92□□□□□ -2.1
Vps28Q9D1C8 Gm29661-201ENSMUST00000186781 315 ntBASIC1.92□□□□□ -2.1
Vps28Q9D1C8 Gm28737-201ENSMUST00000186808 315 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 106.3 ms