Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 n-R5s150-201ENSMUST00000122705 108 ntBASIC2.61□□□□□ -1.99
Ddx56Q9D0R4 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.61□□□□□ -1.99
Ddx56Q9D0R4 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Ddx56Q9D0R4 Gm44491-201ENSMUST00000196794 96 ntBASIC2.61□□□□□ -1.99
Ddx56Q9D0R4 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC2.61□□□□□ -1.99
Ddx56Q9D0R4 Gm45522-201ENSMUST00000210784 166 ntBASIC2.61□□□□□ -1.99
Ddx56Q9D0R4 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Ddx56Q9D0R4 Gm25813-201ENSMUST00000082748 191 ntBASIC2.61□□□□□ -1.99
Ddx56Q9D0R4 AC161250.2-201ENSMUST00000215114 3107 ntBASIC2.61□□□□□ -1.99
Ddx56Q9D0R4 Gm14922-201ENSMUST00000121131 163 ntBASIC2.6□□□□□ -1.99
Ddx56Q9D0R4 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Ddx56Q9D0R4 Gm25371-201ENSMUST00000158162 101 ntBASIC2.6□□□□□ -1.99
Ddx56Q9D0R4 Gm24212-201ENSMUST00000158258 132 ntBASIC2.6□□□□□ -1.99
Ddx56Q9D0R4 Gm16162-201ENSMUST00000162296 297 ntBASIC2.6□□□□□ -1.99
Ddx56Q9D0R4 AC125374.2-201ENSMUST00000214278 162 ntBASIC2.6□□□□□ -1.99
Ddx56Q9D0R4 Gm22622-201ENSMUST00000082870 129 ntBASIC2.6□□□□□ -1.99
Ddx56Q9D0R4 Mir151-201ENSMUST00000083678 68 ntBASIC2.6□□□□□ -1.99
Ddx56Q9D0R4 Gm24698-201ENSMUST00000083883 130 ntBASIC2.6□□□□□ -1.99
Ddx56Q9D0R4 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Ddx56Q9D0R4 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Ddx56Q9D0R4 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.59□□□□□ -1.99
Ddx56Q9D0R4 Gm14588-201ENSMUST00000119895 172 ntBASIC2.59□□□□□ -1.99
Ddx56Q9D0R4 Gm23033-201ENSMUST00000157996 134 ntBASIC2.59□□□□□ -1.99
Ddx56Q9D0R4 Gm26405-201ENSMUST00000158495 100 ntBASIC2.59□□□□□ -1.99
Ddx56Q9D0R4 Gm28921-201ENSMUST00000190219 378 ntBASIC2.59□□□□□ -1.99
Ddx56Q9D0R4 Mir6375-201ENSMUST00000197176 95 ntBASIC2.59□□□□□ -1.99
Ddx56Q9D0R4 AL606472.1-201ENSMUST00000224628 275 ntBASIC2.59□□□□□ -1.99
Ddx56Q9D0R4 Gm26495-201ENSMUST00000083152 137 ntBASIC2.59□□□□□ -1.99
Ddx56Q9D0R4 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Ddx56Q9D0R4 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.58□□□□□ -2
Ddx56Q9D0R4 Gm24283-201ENSMUST00000104233 107 ntBASIC2.58□□□□□ -2
Ddx56Q9D0R4 Gm11936-201ENSMUST00000118323 160 ntBASIC2.58□□□□□ -2
Ddx56Q9D0R4 Gm24691-201ENSMUST00000157762 140 ntBASIC2.58□□□□□ -2
Ddx56Q9D0R4 Gm25718-201ENSMUST00000158632 118 ntBASIC2.58□□□□□ -2
Ddx56Q9D0R4 Gm26287-201ENSMUST00000158887 81 ntBASIC2.58□□□□□ -2
Ddx56Q9D0R4 Mup-ps11-201ENSMUST00000178040 545 ntBASIC2.58□□□□□ -2
Ddx56Q9D0R4 Mup-ps3-201ENSMUST00000178315 545 ntBASIC2.58□□□□□ -2
Ddx56Q9D0R4 Gm22951-201ENSMUST00000179471 107 ntBASIC2.58□□□□□ -2
Ddx56Q9D0R4 Gm3852-201ENSMUST00000182781 264 ntBASIC2.58□□□□□ -2
Ddx56Q9D0R4 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC2.58□□□□□ -2
Ddx56Q9D0R4 Gm8031-201ENSMUST00000213430 626 ntBASIC2.58□□□□□ -2
Ddx56Q9D0R4 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.57□□□□□ -2
Ddx56Q9D0R4 Gm24423-201ENSMUST00000101982 106 ntBASIC2.57□□□□□ -2
Ddx56Q9D0R4 Gm24277-201ENSMUST00000158661 104 ntBASIC2.57□□□□□ -2
Ddx56Q9D0R4 Gm25643-201ENSMUST00000158874 103 ntBASIC2.57□□□□□ -2
Ddx56Q9D0R4 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2.57□□□□□ -2
Ddx56Q9D0R4 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC2.57□□□□□ -2
Ddx56Q9D0R4 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.57□□□□□ -2
Ddx56Q9D0R4 AC164297.1-201ENSMUST00000224484 1561 ntBASIC2.57□□□□□ -2
Ddx56Q9D0R4 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Ddx56Q9D0R4 Gm24907-201ENSMUST00000116932 128 ntBASIC2.56□□□□□ -2
Ddx56Q9D0R4 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC2.56□□□□□ -2
Ddx56Q9D0R4 Gm23980-201ENSMUST00000157135 158 ntBASIC2.56□□□□□ -2
Ddx56Q9D0R4 Gm25113-201ENSMUST00000157185 143 ntBASIC2.56□□□□□ -2
Ddx56Q9D0R4 Gm24771-201ENSMUST00000158508 137 ntBASIC2.56□□□□□ -2
Ddx56Q9D0R4 Gm27532-201ENSMUST00000183726 113 ntBASIC2.56□□□□□ -2
Ddx56Q9D0R4 Gm27979-201ENSMUST00000185126 56 ntBASIC2.56□□□□□ -2
Ddx56Q9D0R4 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC2.56□□□□□ -2
Ddx56Q9D0R4 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.56□□□□□ -2
Ddx56Q9D0R4 Mir107-201ENSMUST00000083660 87 ntBASIC2.56□□□□□ -2
Ddx56Q9D0R4 Snora33-201ENSMUST00000093556 129 ntBASIC2.56□□□□□ -2
Ddx56Q9D0R4 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Ddx56Q9D0R4 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Ddx56Q9D0R4 Mir669g-201ENSMUST00000116809 123 ntBASIC2.55□□□□□ -2
Ddx56Q9D0R4 Mir1898-201ENSMUST00000122643 83 ntBASIC2.55□□□□□ -2
Ddx56Q9D0R4 Defb44-ps-201ENSMUST00000126871 219 ntBASIC2.55□□□□□ -2
Ddx56Q9D0R4 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC2.55□□□□□ -2
Ddx56Q9D0R4 Mir1949-201ENSMUST00000157434 141 ntBASIC2.55□□□□□ -2
Ddx56Q9D0R4 Gm25066-201ENSMUST00000158145 123 ntBASIC2.55□□□□□ -2
Ddx56Q9D0R4 Gm24922-201ENSMUST00000158511 102 ntBASIC2.55□□□□□ -2
Ddx56Q9D0R4 Gm22450-201ENSMUST00000179641 107 ntBASIC2.55□□□□□ -2
Ddx56Q9D0R4 Gm25473-201ENSMUST00000180191 107 ntBASIC2.55□□□□□ -2
Ddx56Q9D0R4 Gm27722-201ENSMUST00000183908 76 ntBASIC2.55□□□□□ -2
Ddx56Q9D0R4 Mir6540-201ENSMUST00000184886 108 ntBASIC2.55□□□□□ -2
Ddx56Q9D0R4 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.55□□□□□ -2
Ddx56Q9D0R4 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC2.55□□□□□ -2
Ddx56Q9D0R4 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC2.55□□□□□ -2
Ddx56Q9D0R4 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Ddx56Q9D0R4 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Ddx56Q9D0R4 Gm24856-201ENSMUST00000082809 107 ntBASIC2.55□□□□□ -2
Ddx56Q9D0R4 Gm26071-201ENSMUST00000083261 107 ntBASIC2.55□□□□□ -2
Ddx56Q9D0R4 Gm24521-201ENSMUST00000083958 107 ntBASIC2.55□□□□□ -2
Ddx56Q9D0R4 Gm24817-201ENSMUST00000093672 105 ntBASIC2.55□□□□□ -2
Ddx56Q9D0R4 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.54□□□□□ -2
Ddx56Q9D0R4 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.54□□□□□ -2
Ddx56Q9D0R4 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.54□□□□□ -2
Ddx56Q9D0R4 Gm14491-201ENSMUST00000121919 199 ntBASIC2.54□□□□□ -2
Ddx56Q9D0R4 Gm24632-201ENSMUST00000122770 323 ntBASIC2.54□□□□□ -2
Ddx56Q9D0R4 Gm24440-201ENSMUST00000157236 63 ntBASIC2.54□□□□□ -2
Ddx56Q9D0R4 Gm24210-201ENSMUST00000158263 133 ntBASIC2.54□□□□□ -2
Ddx56Q9D0R4 Gm24512-201ENSMUST00000174963 65 ntBASIC2.54□□□□□ -2
Ddx56Q9D0R4 Gm25994-201ENSMUST00000175392 101 ntBASIC2.54□□□□□ -2
Ddx56Q9D0R4 Gm26092-201ENSMUST00000179798 97 ntBASIC2.54□□□□□ -2
Ddx56Q9D0R4 Mir669a-1-201ENSMUST00000180238 97 ntBASIC2.54□□□□□ -2
Ddx56Q9D0R4 Mir6916-201ENSMUST00000184514 63 ntBASIC2.54□□□□□ -2
Ddx56Q9D0R4 Gm27545-201ENSMUST00000184755 202 ntBASIC2.54□□□□□ -2
Ddx56Q9D0R4 Gm45365-201ENSMUST00000209489 256 ntBASIC2.54□□□□□ -2
Ddx56Q9D0R4 mt-Ti-201ENSMUST00000082393 69 ntBASIC2.54□□□□□ -2
Ddx56Q9D0R4 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
Ddx56Q9D0R4 Gm24122-201ENSMUST00000104107 132 ntBASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 134.3 ms