Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm3724-201ENSMUST00000197957 349 ntBASIC1.93□□□□□ -2.1
Ddx28Q9CWT6 Gm43220-201ENSMUST00000199299 282 ntBASIC1.93□□□□□ -2.1
Ddx28Q9CWT6 Gm43587-201ENSMUST00000199590 204 ntBASIC1.93□□□□□ -2.1
Ddx28Q9CWT6 Mir497-201ENSMUST00000200557 84 ntBASIC1.93□□□□□ -2.1
Ddx28Q9CWT6 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC1.93□□□□□ -2.1
Ddx28Q9CWT6 Gm45313-201ENSMUST00000210584 178 ntBASIC1.93□□□□□ -2.1
Ddx28Q9CWT6 Gm29818-201ENSMUST00000218070 165 ntBASIC1.93□□□□□ -2.1
Ddx28Q9CWT6 AC163033.1-201ENSMUST00000218608 157 ntBASIC1.93□□□□□ -2.1
Ddx28Q9CWT6 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.93□□□□□ -2.1
Ddx28Q9CWT6 Gm24615-201ENSMUST00000083268 113 ntBASIC1.93□□□□□ -2.1
Ddx28Q9CWT6 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.93□□□□□ -2.1
Ddx28Q9CWT6 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
Ddx28Q9CWT6 Gm24116-201ENSMUST00000103975 107 ntBASIC1.92□□□□□ -2.1
Ddx28Q9CWT6 Gm14709-201ENSMUST00000121225 304 ntBASIC1.92□□□□□ -2.1
Ddx28Q9CWT6 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
Ddx28Q9CWT6 Gm27723-201ENSMUST00000157398 63 ntBASIC1.92□□□□□ -2.1
Ddx28Q9CWT6 Gm22215-201ENSMUST00000157558 96 ntBASIC1.92□□□□□ -2.1
Ddx28Q9CWT6 Gm22537-201ENSMUST00000158172 199 ntBASIC1.92□□□□□ -2.1
Ddx28Q9CWT6 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC1.92□□□□□ -2.1
Ddx28Q9CWT6 Gm28849-201ENSMUST00000188127 174 ntBASIC1.92□□□□□ -2.1
Ddx28Q9CWT6 Gm18357-201ENSMUST00000188184 580 ntBASIC1.92□□□□□ -2.1
Ddx28Q9CWT6 Gm28330-201ENSMUST00000190353 171 ntBASIC1.92□□□□□ -2.1
Ddx28Q9CWT6 Gm43035-201ENSMUST00000197626 517 ntBASIC1.92□□□□□ -2.1
Ddx28Q9CWT6 Mir378a-201ENSMUST00000198300 66 ntBASIC1.92□□□□□ -2.1
Ddx28Q9CWT6 Gm25130-201ENSMUST00000082650 156 ntBASIC1.92□□□□□ -2.1
Ddx28Q9CWT6 Mir300-201ENSMUST00000083485 79 ntBASIC1.92□□□□□ -2.1
Ddx28Q9CWT6 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Ddx28Q9CWT6 Gm12143-201ENSMUST00000119666 332 ntBASIC1.91□□□□□ -2.1
Ddx28Q9CWT6 Gm24010-201ENSMUST00000157731 282 ntBASIC1.91□□□□□ -2.1
Ddx28Q9CWT6 Gm22159-201ENSMUST00000158412 130 ntBASIC1.91□□□□□ -2.1
Ddx28Q9CWT6 Gm22666-201ENSMUST00000158717 164 ntBASIC1.91□□□□□ -2.1
Ddx28Q9CWT6 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Ddx28Q9CWT6 Gm27540-201ENSMUST00000184950 187 ntBASIC1.91□□□□□ -2.1
Ddx28Q9CWT6 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.91□□□□□ -2.1
Ddx28Q9CWT6 Mir465d-201ENSMUST00000196314 58 ntBASIC1.91□□□□□ -2.1
Ddx28Q9CWT6 Gm18546-201ENSMUST00000197245 676 ntBASIC1.91□□□□□ -2.1
Ddx28Q9CWT6 Gm44938-201ENSMUST00000208614 427 ntBASIC1.91□□□□□ -2.1
Ddx28Q9CWT6 Gm46997-201ENSMUST00000222108 217 ntBASIC1.91□□□□□ -2.1
Ddx28Q9CWT6 AC133517.1-203ENSMUST00000225570 390 ntBASIC1.91□□□□□ -2.1
Ddx28Q9CWT6 Gm25788-201ENSMUST00000082721 131 ntBASIC1.91□□□□□ -2.1
Ddx28Q9CWT6 Gm25789-201ENSMUST00000083294 76 ntBASIC1.91□□□□□ -2.1
Ddx28Q9CWT6 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.9□□□□□ -2.1
Ddx28Q9CWT6 Gm15002-201ENSMUST00000118406 452 ntBASIC1.9□□□□□ -2.11
Ddx28Q9CWT6 Gm11904-201ENSMUST00000120562 248 ntBASIC1.9□□□□□ -2.11
Ddx28Q9CWT6 Gm14919-201ENSMUST00000120839 390 ntBASIC1.9□□□□□ -2.11
Ddx28Q9CWT6 Gm22281-201ENSMUST00000157198 103 ntBASIC1.9□□□□□ -2.11
Ddx28Q9CWT6 Gm24237-201ENSMUST00000157790 132 ntBASIC1.9□□□□□ -2.11
Ddx28Q9CWT6 Gm23581-201ENSMUST00000158531 63 ntBASIC1.9□□□□□ -2.11
Ddx28Q9CWT6 Gm20438-201ENSMUST00000174441 329 ntBASIC1.9□□□□□ -2.11
Ddx28Q9CWT6 Gm22510-201ENSMUST00000179304 79 ntBASIC1.9□□□□□ -2.11
Ddx28Q9CWT6 Gm26336-201ENSMUST00000179449 79 ntBASIC1.9□□□□□ -2.11
Ddx28Q9CWT6 Gm26390-201ENSMUST00000179628 79 ntBASIC1.9□□□□□ -2.11
Ddx28Q9CWT6 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.9□□□□□ -2.11
Ddx28Q9CWT6 AC161426.1-201ENSMUST00000214137 286 ntBASIC1.9□□□□□ -2.11
Ddx28Q9CWT6 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
Ddx28Q9CWT6 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.9□□□□□ -2.11
Ddx28Q9CWT6 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Ddx28Q9CWT6 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.89□□□□□ -2.11
Ddx28Q9CWT6 Mir344e-201ENSMUST00000104677 66 ntBASIC1.89□□□□□ -2.11
Ddx28Q9CWT6 Gm22101-201ENSMUST00000157928 103 ntBASIC1.89□□□□□ -2.11
Ddx28Q9CWT6 Gm22315-201ENSMUST00000158010 143 ntBASIC1.89□□□□□ -2.11
Ddx28Q9CWT6 Gm24225-201ENSMUST00000158825 98 ntBASIC1.89□□□□□ -2.11
Ddx28Q9CWT6 Gm25368-201ENSMUST00000158847 131 ntBASIC1.89□□□□□ -2.11
Ddx28Q9CWT6 Gm17052-201ENSMUST00000165496 289 ntBASIC1.89□□□□□ -2.11
Ddx28Q9CWT6 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.89□□□□□ -2.11
Ddx28Q9CWT6 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.89□□□□□ -2.11
Ddx28Q9CWT6 Gm24390-201ENSMUST00000179578 62 ntBASIC1.89□□□□□ -2.11
Ddx28Q9CWT6 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Ddx28Q9CWT6 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC1.89□□□□□ -2.11
Ddx28Q9CWT6 AC183096.2-201ENSMUST00000228733 457 ntBASIC1.89□□□□□ -2.11
Ddx28Q9CWT6 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Ddx28Q9CWT6 Gm24316-201ENSMUST00000083041 107 ntBASIC1.89□□□□□ -2.11
Ddx28Q9CWT6 Gm24163-201ENSMUST00000093660 132 ntBASIC1.89□□□□□ -2.11
Ddx28Q9CWT6 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
Ddx28Q9CWT6 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Ddx28Q9CWT6 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Ddx28Q9CWT6 Gm43373-201ENSMUST00000202552 2870 ntBASIC1.88□□□□□ -2.11
Ddx28Q9CWT6 Gm24635-201ENSMUST00000122712 128 ntBASIC1.88□□□□□ -2.11
Ddx28Q9CWT6 Gm25460-201ENSMUST00000157954 127 ntBASIC1.88□□□□□ -2.11
Ddx28Q9CWT6 Gm24333-201ENSMUST00000175101 84 ntBASIC1.88□□□□□ -2.11
Ddx28Q9CWT6 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC1.88□□□□□ -2.11
Ddx28Q9CWT6 Gm27521-201ENSMUST00000184022 64 ntBASIC1.88□□□□□ -2.11
Ddx28Q9CWT6 Mir7050-201ENSMUST00000184636 60 ntBASIC1.88□□□□□ -2.11
Ddx28Q9CWT6 Gm27959-201ENSMUST00000185172 111 ntBASIC1.88□□□□□ -2.11
Ddx28Q9CWT6 Gm28058-201ENSMUST00000186421 264 ntBASIC1.88□□□□□ -2.11
Ddx28Q9CWT6 Gm28992-201ENSMUST00000190534 139 ntBASIC1.88□□□□□ -2.11
Ddx28Q9CWT6 Gm37918-201ENSMUST00000192071 120 ntBASIC1.88□□□□□ -2.11
Ddx28Q9CWT6 Gm32175-201ENSMUST00000193641 346 ntBASIC1.88□□□□□ -2.11
Ddx28Q9CWT6 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC1.88□□□□□ -2.11
Ddx28Q9CWT6 Gm45456-201ENSMUST00000210841 243 ntBASIC1.88□□□□□ -2.11
Ddx28Q9CWT6 Mir222-201ENSMUST00000083537 79 ntBASIC1.88□□□□□ -2.11
Ddx28Q9CWT6 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Ddx28Q9CWT6 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Ddx28Q9CWT6 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Ddx28Q9CWT6 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.87□□□□□ -2.11
Ddx28Q9CWT6 Gm25094-201ENSMUST00000103992 131 ntBASIC1.87□□□□□ -2.11
Ddx28Q9CWT6 Gm22227-201ENSMUST00000157356 259 ntBASIC1.87□□□□□ -2.11
Ddx28Q9CWT6 Gm26150-201ENSMUST00000157426 151 ntBASIC1.87□□□□□ -2.11
Ddx28Q9CWT6 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC1.87□□□□□ -2.11
Ddx28Q9CWT6 Gm7958-201ENSMUST00000178255 468 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 92 ms