Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.74□□□□□ -2.13
Smc1aQ9CU62 Gm25929-201ENSMUST00000082784 107 ntBASIC1.74□□□□□ -2.13
Smc1aQ9CU62 Gm24977-201ENSMUST00000083106 163 ntBASIC1.74□□□□□ -2.13
Smc1aQ9CU62 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Smc1aQ9CU62 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC1.73□□□□□ -2.13
Smc1aQ9CU62 Gm14906-201ENSMUST00000119265 390 ntBASIC1.73□□□□□ -2.13
Smc1aQ9CU62 Gm23435-201ENSMUST00000157183 156 ntBASIC1.73□□□□□ -2.13
Smc1aQ9CU62 Gm23718-201ENSMUST00000157350 307 ntBASIC1.73□□□□□ -2.13
Smc1aQ9CU62 Gm22221-201ENSMUST00000157362 103 ntBASIC1.73□□□□□ -2.13
Smc1aQ9CU62 Gm24677-201ENSMUST00000158755 150 ntBASIC1.73□□□□□ -2.13
Smc1aQ9CU62 Gm24487-201ENSMUST00000178017 63 ntBASIC1.73□□□□□ -2.13
Smc1aQ9CU62 Mir6419-201ENSMUST00000184784 113 ntBASIC1.73□□□□□ -2.13
Smc1aQ9CU62 Gm28453-203ENSMUST00000187041 189 ntBASIC1.73□□□□□ -2.13
Smc1aQ9CU62 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.73□□□□□ -2.13
Smc1aQ9CU62 Gm29229-201ENSMUST00000188874 323 ntBASIC1.73□□□□□ -2.13
Smc1aQ9CU62 Mir181a-1-201ENSMUST00000083631 87 ntBASIC1.73□□□□□ -2.13
Smc1aQ9CU62 Gm23142-201ENSMUST00000101848 105 ntBASIC1.72□□□□□ -2.13
Smc1aQ9CU62 Gm26240-201ENSMUST00000101893 105 ntBASIC1.72□□□□□ -2.13
Smc1aQ9CU62 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Smc1aQ9CU62 Gm12512-201ENSMUST00000119620 217 ntBASIC1.72□□□□□ -2.13
Smc1aQ9CU62 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC1.72□□□□□ -2.13
Smc1aQ9CU62 Gm28995-201ENSMUST00000186625 261 ntBASIC1.72□□□□□ -2.13
Smc1aQ9CU62 Gm33866-201ENSMUST00000196911 289 ntBASIC1.72□□□□□ -2.13
Smc1aQ9CU62 Gm44010-201ENSMUST00000204432 331 ntBASIC1.72□□□□□ -2.13
Smc1aQ9CU62 Gm10264-201ENSMUST00000220589 429 ntBASIC1.72□□□□□ -2.13
Smc1aQ9CU62 Gm46993-201ENSMUST00000220708 259 ntBASIC1.72□□□□□ -2.13
Smc1aQ9CU62 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC1.72□□□□□ -2.13
Smc1aQ9CU62 Gm22972-201ENSMUST00000083297 131 ntBASIC1.72□□□□□ -2.13
Smc1aQ9CU62 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Smc1aQ9CU62 Gm6829-201ENSMUST00000119858 360 ntBASIC1.71□□□□□ -2.14
Smc1aQ9CU62 Gm13729-201ENSMUST00000120328 406 ntBASIC1.71□□□□□ -2.14
Smc1aQ9CU62 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.71□□□□□ -2.14
Smc1aQ9CU62 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.71□□□□□ -2.14
Smc1aQ9CU62 Gm22080-201ENSMUST00000157591 106 ntBASIC1.71□□□□□ -2.14
Smc1aQ9CU62 Gm24504-201ENSMUST00000157679 100 ntBASIC1.71□□□□□ -2.14
Smc1aQ9CU62 Gm23854-201ENSMUST00000158378 108 ntBASIC1.71□□□□□ -2.14
Smc1aQ9CU62 Gm24348-201ENSMUST00000158710 130 ntBASIC1.71□□□□□ -2.14
Smc1aQ9CU62 Gm24174-201ENSMUST00000158933 111 ntBASIC1.71□□□□□ -2.14
Smc1aQ9CU62 Gm17100-201ENSMUST00000168963 272 ntBASIC1.71□□□□□ -2.14
Smc1aQ9CU62 Gm24308-201ENSMUST00000177773 114 ntBASIC1.71□□□□□ -2.14
Smc1aQ9CU62 Gm29603-201ENSMUST00000186792 334 ntBASIC1.71□□□□□ -2.14
Smc1aQ9CU62 Gm29167-201ENSMUST00000190024 377 ntBASIC1.71□□□□□ -2.14
Smc1aQ9CU62 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.71□□□□□ -2.14
Smc1aQ9CU62 Gm45907-201ENSMUST00000213023 193 ntBASIC1.71□□□□□ -2.14
Smc1aQ9CU62 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC1.71□□□□□ -2.14
Smc1aQ9CU62 AC122905.2-201ENSMUST00000220325 269 ntBASIC1.71□□□□□ -2.14
Smc1aQ9CU62 AC125311.1-201ENSMUST00000226950 220 ntBASIC1.71□□□□□ -2.14
Smc1aQ9CU62 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.71□□□□□ -2.14
Smc1aQ9CU62 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.71□□□□□ -2.14
Smc1aQ9CU62 Mir320-201ENSMUST00000083594 82 ntBASIC1.71□□□□□ -2.14
Smc1aQ9CU62 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC1.71□□□□□ -2.14
Smc1aQ9CU62 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
Smc1aQ9CU62 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Smc1aQ9CU62 Mir872-201ENSMUST00000104728 81 ntBASIC1.7□□□□□ -2.14
Smc1aQ9CU62 Gm22193-201ENSMUST00000116868 76 ntBASIC1.7□□□□□ -2.14
Smc1aQ9CU62 Gm13714-201ENSMUST00000117313 221 ntBASIC1.7□□□□□ -2.14
Smc1aQ9CU62 Gm12351-201ENSMUST00000118727 292 ntBASIC1.7□□□□□ -2.14
Smc1aQ9CU62 Gm11606-201ENSMUST00000120706 617 ntBASIC1.7□□□□□ -2.14
Smc1aQ9CU62 Gm26181-201ENSMUST00000157687 106 ntBASIC1.7□□□□□ -2.14
Smc1aQ9CU62 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Smc1aQ9CU62 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC1.7□□□□□ -2.14
Smc1aQ9CU62 Gm28257-201ENSMUST00000185244 463 ntBASIC1.7□□□□□ -2.14
Smc1aQ9CU62 Gm44962-201ENSMUST00000206460 279 ntBASIC1.7□□□□□ -2.14
Smc1aQ9CU62 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.7□□□□□ -2.14
Smc1aQ9CU62 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.7□□□□□ -2.14
Smc1aQ9CU62 Mir496a-201ENSMUST00000093627 79 ntBASIC1.7□□□□□ -2.14
Smc1aQ9CU62 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.7□□□□□ -2.14
Smc1aQ9CU62 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Smc1aQ9CU62 Mir374b-201ENSMUST00000102314 95 ntBASIC1.69□□□□□ -2.14
Smc1aQ9CU62 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Smc1aQ9CU62 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.69□□□□□ -2.14
Smc1aQ9CU62 Gm14803-201ENSMUST00000117163 361 ntBASIC1.69□□□□□ -2.14
Smc1aQ9CU62 Gm15115-201ENSMUST00000121145 264 ntBASIC1.69□□□□□ -2.14
Smc1aQ9CU62 Gm24379-201ENSMUST00000122695 86 ntBASIC1.69□□□□□ -2.14
Smc1aQ9CU62 Gm23170-201ENSMUST00000157158 106 ntBASIC1.69□□□□□ -2.14
Smc1aQ9CU62 Gm25371-201ENSMUST00000158162 101 ntBASIC1.69□□□□□ -2.14
Smc1aQ9CU62 Gm22263-201ENSMUST00000180060 104 ntBASIC1.69□□□□□ -2.14
Smc1aQ9CU62 Gm9156-201ENSMUST00000189660 463 ntBASIC1.69□□□□□ -2.14
Smc1aQ9CU62 Gm44960-201ENSMUST00000207403 141 ntBASIC1.69□□□□□ -2.14
Smc1aQ9CU62 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
Smc1aQ9CU62 AC100209.2-201ENSMUST00000224461 451 ntBASIC1.69□□□□□ -2.14
Smc1aQ9CU62 AC151833.1-201ENSMUST00000227752 574 ntBASIC1.69□□□□□ -2.14
Smc1aQ9CU62 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Smc1aQ9CU62 Gm22685-201ENSMUST00000082848 106 ntBASIC1.69□□□□□ -2.14
Smc1aQ9CU62 Snora3-201ENSMUST00000083082 132 ntBASIC1.69□□□□□ -2.14
Smc1aQ9CU62 Mir340-201ENSMUST00000083483 98 ntBASIC1.69□□□□□ -2.14
Smc1aQ9CU62 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Smc1aQ9CU62 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Smc1aQ9CU62 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Smc1aQ9CU62 Gm11859-201ENSMUST00000118099 455 ntBASIC1.68□□□□□ -2.14
Smc1aQ9CU62 Gm24229-201ENSMUST00000158830 118 ntBASIC1.68□□□□□ -2.14
Smc1aQ9CU62 Gm23793-201ENSMUST00000179396 117 ntBASIC1.68□□□□□ -2.14
Smc1aQ9CU62 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.68□□□□□ -2.14
Smc1aQ9CU62 Gm43911-201ENSMUST00000203097 76 ntBASIC1.68□□□□□ -2.14
Smc1aQ9CU62 AC164161.1-201ENSMUST00000214076 639 ntBASIC1.68□□□□□ -2.14
Smc1aQ9CU62 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.68□□□□□ -2.14
Smc1aQ9CU62 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.68□□□□□ -2.14
Smc1aQ9CU62 AC163646.2-201ENSMUST00000227962 141 ntBASIC1.68□□□□□ -2.14
Smc1aQ9CU62 Mir653-201ENSMUST00000102402 85 ntBASIC1.67□□□□□ -2.14
Smc1aQ9CU62 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms