Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gm29034-201ENSMUST00000188099 315 ntBASIC1.62□□□□□ -2.15
Ccdc43Q9CR29 Gm28752-201ENSMUST00000188340 315 ntBASIC1.62□□□□□ -2.15
Ccdc43Q9CR29 Gm29378-201ENSMUST00000188723 315 ntBASIC1.62□□□□□ -2.15
Ccdc43Q9CR29 Gm28569-201ENSMUST00000188748 315 ntBASIC1.62□□□□□ -2.15
Ccdc43Q9CR29 Gm28120-201ENSMUST00000188812 315 ntBASIC1.62□□□□□ -2.15
Ccdc43Q9CR29 Gm29308-201ENSMUST00000188863 315 ntBASIC1.62□□□□□ -2.15
Ccdc43Q9CR29 Gm28369-201ENSMUST00000188993 315 ntBASIC1.62□□□□□ -2.15
Ccdc43Q9CR29 Gm28537-201ENSMUST00000189026 315 ntBASIC1.62□□□□□ -2.15
Ccdc43Q9CR29 Gm28909-201ENSMUST00000189406 315 ntBASIC1.62□□□□□ -2.15
Ccdc43Q9CR29 Gm28861-201ENSMUST00000189681 315 ntBASIC1.62□□□□□ -2.15
Ccdc43Q9CR29 Gm28717-201ENSMUST00000189950 315 ntBASIC1.62□□□□□ -2.15
Ccdc43Q9CR29 Gm29180-201ENSMUST00000190003 315 ntBASIC1.62□□□□□ -2.15
Ccdc43Q9CR29 Gm29575-201ENSMUST00000190597 315 ntBASIC1.62□□□□□ -2.15
Ccdc43Q9CR29 Gm29631-201ENSMUST00000191065 315 ntBASIC1.62□□□□□ -2.15
Ccdc43Q9CR29 Gm28160-201ENSMUST00000191229 315 ntBASIC1.62□□□□□ -2.15
Ccdc43Q9CR29 Gm29469-201ENSMUST00000191448 315 ntBASIC1.62□□□□□ -2.15
Ccdc43Q9CR29 Gm37129-201ENSMUST00000195791 315 ntBASIC1.62□□□□□ -2.15
Ccdc43Q9CR29 Gm43723-201ENSMUST00000196886 189 ntBASIC1.62□□□□□ -2.15
Ccdc43Q9CR29 Gm24152-201ENSMUST00000082764 163 ntBASIC1.62□□□□□ -2.15
Ccdc43Q9CR29 Gm23721-201ENSMUST00000083005 107 ntBASIC1.62□□□□□ -2.15
Ccdc43Q9CR29 Gm25759-201ENSMUST00000103988 129 ntBASIC1.61□□□□□ -2.15
Ccdc43Q9CR29 Gm25909-201ENSMUST00000157619 121 ntBASIC1.61□□□□□ -2.15
Ccdc43Q9CR29 Gm24853-201ENSMUST00000158026 121 ntBASIC1.61□□□□□ -2.15
Ccdc43Q9CR29 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC1.61□□□□□ -2.15
Ccdc43Q9CR29 Gm24487-201ENSMUST00000178017 63 ntBASIC1.61□□□□□ -2.15
Ccdc43Q9CR29 Gm17067-202ENSMUST00000180131 123 ntBASIC1.61□□□□□ -2.15
Ccdc43Q9CR29 Mir7675-201ENSMUST00000184262 58 ntBASIC1.61□□□□□ -2.15
Ccdc43Q9CR29 Gm20257-202ENSMUST00000188643 130 ntBASIC1.61□□□□□ -2.15
Ccdc43Q9CR29 Gm45207-201ENSMUST00000207469 145 ntBASIC1.61□□□□□ -2.15
Ccdc43Q9CR29 Gm24356-201ENSMUST00000082859 106 ntBASIC1.61□□□□□ -2.15
Ccdc43Q9CR29 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.6□□□□□ -2.15
Ccdc43Q9CR29 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.6□□□□□ -2.15
Ccdc43Q9CR29 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC1.6□□□□□ -2.15
Ccdc43Q9CR29 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
Ccdc43Q9CR29 Gm18291-201ENSMUST00000190791 301 ntBASIC1.6□□□□□ -2.15
Ccdc43Q9CR29 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC1.6□□□□□ -2.15
Ccdc43Q9CR29 AC164086.1-201ENSMUST00000221038 289 ntBASIC1.6□□□□□ -2.15
Ccdc43Q9CR29 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.59□□□□□ -2.15
Ccdc43Q9CR29 Gm17113-201ENSMUST00000170118 171 ntBASIC1.59□□□□□ -2.15
Ccdc43Q9CR29 Gm22862-201ENSMUST00000178593 121 ntBASIC1.59□□□□□ -2.15
Ccdc43Q9CR29 Gm27265-201ENSMUST00000183559 77 ntBASIC1.59□□□□□ -2.15
Ccdc43Q9CR29 Gm37918-201ENSMUST00000192071 120 ntBASIC1.59□□□□□ -2.15
Ccdc43Q9CR29 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
Ccdc43Q9CR29 AC163295.1-201ENSMUST00000227840 314 ntBASIC1.59□□□□□ -2.15
Ccdc43Q9CR29 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
Ccdc43Q9CR29 Gm25992-201ENSMUST00000102437 109 ntBASIC1.58□□□□□ -2.16
Ccdc43Q9CR29 Gm25495-201ENSMUST00000104431 131 ntBASIC1.58□□□□□ -2.16
Ccdc43Q9CR29 Gm14882-201ENSMUST00000117216 218 ntBASIC1.58□□□□□ -2.16
Ccdc43Q9CR29 Gm11359-201ENSMUST00000120039 567 ntBASIC1.58□□□□□ -2.16
Ccdc43Q9CR29 Gm25434-201ENSMUST00000158278 167 ntBASIC1.58□□□□□ -2.16
Ccdc43Q9CR29 Gm24810-201ENSMUST00000175317 70 ntBASIC1.58□□□□□ -2.16
Ccdc43Q9CR29 Gm44960-201ENSMUST00000207403 141 ntBASIC1.58□□□□□ -2.16
Ccdc43Q9CR29 Gm22935-201ENSMUST00000103960 104 ntBASIC1.57□□□□□ -2.16
Ccdc43Q9CR29 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC1.57□□□□□ -2.16
Ccdc43Q9CR29 Gm23670-201ENSMUST00000157469 119 ntBASIC1.57□□□□□ -2.16
Ccdc43Q9CR29 Gm25958-201ENSMUST00000175114 71 ntBASIC1.57□□□□□ -2.16
Ccdc43Q9CR29 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC1.57□□□□□ -2.16
Ccdc43Q9CR29 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.57□□□□□ -2.16
Ccdc43Q9CR29 Gm43367-201ENSMUST00000199986 625 ntBASIC1.57□□□□□ -2.16
Ccdc43Q9CR29 Gm44408-201ENSMUST00000200205 66 ntBASIC1.57□□□□□ -2.16
Ccdc43Q9CR29 Gm20144-201ENSMUST00000203031 165 ntBASIC1.57□□□□□ -2.16
Ccdc43Q9CR29 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.57□□□□□ -2.16
Ccdc43Q9CR29 AC159885.1-201ENSMUST00000222221 199 ntBASIC1.57□□□□□ -2.16
Ccdc43Q9CR29 Gm10033-201ENSMUST00000072427 1813 ntBASIC1.56□□□□□ -2.16
Ccdc43Q9CR29 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.56□□□□□ -2.16
Ccdc43Q9CR29 Gm23907-201ENSMUST00000104595 189 ntBASIC1.56□□□□□ -2.16
Ccdc43Q9CR29 Gm23221-201ENSMUST00000158118 93 ntBASIC1.56□□□□□ -2.16
Ccdc43Q9CR29 Gm22447-201ENSMUST00000158155 92 ntBASIC1.56□□□□□ -2.16
Ccdc43Q9CR29 Gm25831-201ENSMUST00000158924 163 ntBASIC1.56□□□□□ -2.16
Ccdc43Q9CR29 Traj60-201ENSMUST00000167781 54 ntBASIC1.56□□□□□ -2.16
Ccdc43Q9CR29 Gm27493-201ENSMUST00000184128 78 ntBASIC1.56□□□□□ -2.16
Ccdc43Q9CR29 Gm28409-201ENSMUST00000187064 103 ntBASIC1.56□□□□□ -2.16
Ccdc43Q9CR29 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.56□□□□□ -2.16
Ccdc43Q9CR29 Gm37337-201ENSMUST00000192601 993 ntBASIC1.56□□□□□ -2.16
Ccdc43Q9CR29 Gm38041-201ENSMUST00000194445 661 ntBASIC1.56□□□□□ -2.16
Ccdc43Q9CR29 Gm43427-201ENSMUST00000198188 331 ntBASIC1.56□□□□□ -2.16
Ccdc43Q9CR29 Gm22685-201ENSMUST00000082848 106 ntBASIC1.56□□□□□ -2.16
Ccdc43Q9CR29 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Ccdc43Q9CR29 Gm25773-201ENSMUST00000116718 127 ntBASIC1.55□□□□□ -2.16
Ccdc43Q9CR29 Gm11859-201ENSMUST00000118099 455 ntBASIC1.55□□□□□ -2.16
Ccdc43Q9CR29 Gm12143-201ENSMUST00000119666 332 ntBASIC1.55□□□□□ -2.16
Ccdc43Q9CR29 Gm11857-201ENSMUST00000119817 324 ntBASIC1.55□□□□□ -2.16
Ccdc43Q9CR29 Gm25805-201ENSMUST00000122788 108 ntBASIC1.55□□□□□ -2.16
Ccdc43Q9CR29 Gm22559-201ENSMUST00000157329 134 ntBASIC1.55□□□□□ -2.16
Ccdc43Q9CR29 Snord13-201ENSMUST00000157627 104 ntBASIC1.55□□□□□ -2.16
Ccdc43Q9CR29 Gm37089-201ENSMUST00000195616 129 ntBASIC1.55□□□□□ -2.16
Ccdc43Q9CR29 Gm42834-201ENSMUST00000196845 256 ntBASIC1.55□□□□□ -2.16
Ccdc43Q9CR29 Igkv4-65-201ENSMUST00000196986 358 ntBASIC1.55□□□□□ -2.16
Ccdc43Q9CR29 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.55□□□□□ -2.16
Ccdc43Q9CR29 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.55□□□□□ -2.16
Ccdc43Q9CR29 Gm26493-201ENSMUST00000083155 136 ntBASIC1.55□□□□□ -2.16
Ccdc43Q9CR29 Gm25789-201ENSMUST00000083294 76 ntBASIC1.55□□□□□ -2.16
Ccdc43Q9CR29 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC1.54□□□□□ -2.16
Ccdc43Q9CR29 Gm13992-201ENSMUST00000120558 156 ntBASIC1.54□□□□□ -2.16
Ccdc43Q9CR29 Gm23122-201ENSMUST00000157645 103 ntBASIC1.54□□□□□ -2.16
Ccdc43Q9CR29 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC1.54□□□□□ -2.16
Ccdc43Q9CR29 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Ccdc43Q9CR29 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Ccdc43Q9CR29 Mir7118-201ENSMUST00000197760 61 ntBASIC1.54□□□□□ -2.16
Ccdc43Q9CR29 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 138.8 ms