Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm27421-201ENSMUST00000184729 167 ntBASIC0.92□□□□□ -2.26
RTRAFQ9CQE8 Gm37337-201ENSMUST00000192601 993 ntBASIC0.92□□□□□ -2.26
RTRAFQ9CQE8 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC0.92□□□□□ -2.26
RTRAFQ9CQE8 Gm44010-201ENSMUST00000204432 331 ntBASIC0.92□□□□□ -2.26
RTRAFQ9CQE8 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
RTRAFQ9CQE8 Gm33654-201ENSMUST00000221704 215 ntBASIC0.92□□□□□ -2.26
RTRAFQ9CQE8 AC162857.1-201ENSMUST00000226614 400 ntBASIC0.92□□□□□ -2.26
RTRAFQ9CQE8 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
RTRAFQ9CQE8 Gm24355-201ENSMUST00000082858 122 ntBASIC0.92□□□□□ -2.26
RTRAFQ9CQE8 AC154515.1-201ENSMUST00000226085 2841 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm14882-201ENSMUST00000117216 218 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm11859-201ENSMUST00000118099 455 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm11471-201ENSMUST00000121824 198 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm22791-201ENSMUST00000157232 145 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm23048-201ENSMUST00000157237 129 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm23277-201ENSMUST00000157914 136 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm22803-201ENSMUST00000158049 283 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Mir3092-201ENSMUST00000174954 96 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm24618-201ENSMUST00000177718 94 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm23953-201ENSMUST00000178214 94 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm23660-201ENSMUST00000178362 79 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm24088-201ENSMUST00000179100 79 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm26332-201ENSMUST00000179813 94 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm22863-201ENSMUST00000180265 94 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm28110-201ENSMUST00000185782 315 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm29057-201ENSMUST00000186468 315 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm28737-201ENSMUST00000186808 315 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm29147-201ENSMUST00000186846 315 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm29118-201ENSMUST00000186908 315 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm28433-201ENSMUST00000187085 315 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm29227-201ENSMUST00000187139 315 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm28759-201ENSMUST00000187621 315 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm28831-201ENSMUST00000187739 315 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm28200-201ENSMUST00000187778 315 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm29034-201ENSMUST00000188099 315 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm28752-201ENSMUST00000188340 315 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm29378-201ENSMUST00000188723 315 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm28569-201ENSMUST00000188748 315 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm28120-201ENSMUST00000188812 315 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm28369-201ENSMUST00000188993 315 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm28537-201ENSMUST00000189026 315 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm28909-201ENSMUST00000189406 315 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm28861-201ENSMUST00000189681 315 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm28717-201ENSMUST00000189950 315 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm29180-201ENSMUST00000190003 315 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm29575-201ENSMUST00000190597 315 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm29631-201ENSMUST00000191065 315 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm28160-201ENSMUST00000191229 315 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm29469-201ENSMUST00000191448 315 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm37162-201ENSMUST00000191708 551 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Trbv7-201ENSMUST00000193339 402 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm37129-201ENSMUST00000195791 315 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm20144-201ENSMUST00000203031 165 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm45150-201ENSMUST00000206051 467 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 AC131720.2-201ENSMUST00000220420 431 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 AC151833.1-201ENSMUST00000227752 574 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Mir133a-1-201ENSMUST00000083465 68 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Mir211-201ENSMUST00000083651 106 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Gm42718-201ENSMUST00000197319 2681 ntBASIC0.91□□□□□ -2.26
RTRAFQ9CQE8 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.26
RTRAFQ9CQE8 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.26
RTRAFQ9CQE8 Gm13967-201ENSMUST00000120404 380 ntBASIC0.9□□□□□ -2.27
RTRAFQ9CQE8 Gm22555-201ENSMUST00000157801 62 ntBASIC0.9□□□□□ -2.27
RTRAFQ9CQE8 Gm20462-201ENSMUST00000172623 408 ntBASIC0.9□□□□□ -2.27
RTRAFQ9CQE8 Gm24810-201ENSMUST00000175317 70 ntBASIC0.9□□□□□ -2.27
RTRAFQ9CQE8 Mir5118-201ENSMUST00000175551 67 ntBASIC0.9□□□□□ -2.27
RTRAFQ9CQE8 Gm17067-202ENSMUST00000180131 123 ntBASIC0.9□□□□□ -2.27
RTRAFQ9CQE8 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
RTRAFQ9CQE8 Mir7226-201ENSMUST00000184953 60 ntBASIC0.9□□□□□ -2.27
RTRAFQ9CQE8 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC0.9□□□□□ -2.27
RTRAFQ9CQE8 Gm18291-201ENSMUST00000190791 301 ntBASIC0.9□□□□□ -2.27
RTRAFQ9CQE8 Gm37918-201ENSMUST00000192071 120 ntBASIC0.9□□□□□ -2.27
RTRAFQ9CQE8 Gm37089-201ENSMUST00000195616 129 ntBASIC0.9□□□□□ -2.27
RTRAFQ9CQE8 Gm45119-201ENSMUST00000207612 199 ntBASIC0.9□□□□□ -2.27
RTRAFQ9CQE8 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC0.9□□□□□ -2.27
RTRAFQ9CQE8 Gm44754-201ENSMUST00000208155 400 ntBASIC0.9□□□□□ -2.27
RTRAFQ9CQE8 Gm19855-201ENSMUST00000210145 249 ntBASIC0.9□□□□□ -2.27
RTRAFQ9CQE8 Gm45654-201ENSMUST00000210980 123 ntBASIC0.9□□□□□ -2.27
RTRAFQ9CQE8 AC155712.1-201ENSMUST00000219704 160 ntBASIC0.9□□□□□ -2.27
RTRAFQ9CQE8 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.9□□□□□ -2.27
RTRAFQ9CQE8 AC167192.1-201ENSMUST00000225908 139 ntBASIC0.9□□□□□ -2.27
RTRAFQ9CQE8 Snord7-201ENSMUST00000083781 97 ntBASIC0.9□□□□□ -2.27
RTRAFQ9CQE8 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
RTRAFQ9CQE8 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC0.9□□□□□ -2.27
RTRAFQ9CQE8 Gm13992-201ENSMUST00000120558 156 ntBASIC0.89□□□□□ -2.27
RTRAFQ9CQE8 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC0.89□□□□□ -2.27
RTRAFQ9CQE8 Gm25805-201ENSMUST00000122788 108 ntBASIC0.89□□□□□ -2.27
RTRAFQ9CQE8 Gm24394-201ENSMUST00000158141 123 ntBASIC0.89□□□□□ -2.27
RTRAFQ9CQE8 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.89□□□□□ -2.27
RTRAFQ9CQE8 Gm25069-201ENSMUST00000175238 86 ntBASIC0.89□□□□□ -2.27
RTRAFQ9CQE8 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC0.89□□□□□ -2.27
RTRAFQ9CQE8 Gm28992-201ENSMUST00000190534 139 ntBASIC0.89□□□□□ -2.27
RTRAFQ9CQE8 AC173345.2-201ENSMUST00000222795 153 ntBASIC0.89□□□□□ -2.27
RTRAFQ9CQE8 AC183092.1-201ENSMUST00000224301 153 ntBASIC0.89□□□□□ -2.27
RTRAFQ9CQE8 Gm25038-201ENSMUST00000082928 130 ntBASIC0.89□□□□□ -2.27
RTRAFQ9CQE8 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms