Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm3027-201ENSMUST00000167579 451 ntBASIC0.96□□□□□ -2.26
Use1Q9CQ56 Gm24085-201ENSMUST00000175172 116 ntBASIC0.96□□□□□ -2.26
Use1Q9CQ56 Mir5104-201ENSMUST00000175319 94 ntBASIC0.96□□□□□ -2.26
Use1Q9CQ56 Gm27957-201ENSMUST00000184054 127 ntBASIC0.96□□□□□ -2.26
Use1Q9CQ56 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC0.96□□□□□ -2.26
Use1Q9CQ56 Gm28257-201ENSMUST00000185244 463 ntBASIC0.96□□□□□ -2.26
Use1Q9CQ56 AC147101.1-201ENSMUST00000217964 312 ntBASIC0.96□□□□□ -2.26
Use1Q9CQ56 Gm20102-201ENSMUST00000222445 220 ntBASIC0.96□□□□□ -2.26
Use1Q9CQ56 AC144733.1-201ENSMUST00000222893 1289 ntBASIC0.96□□□□□ -2.26
Use1Q9CQ56 AC100209.2-201ENSMUST00000224461 451 ntBASIC0.96□□□□□ -2.26
Use1Q9CQ56 Gm23515-201ENSMUST00000082829 107 ntBASIC0.96□□□□□ -2.26
Use1Q9CQ56 Mir219a-2-201ENSMUST00000083551 97 ntBASIC0.96□□□□□ -2.26
Use1Q9CQ56 Gm26108-201ENSMUST00000083973 191 ntBASIC0.96□□□□□ -2.26
Use1Q9CQ56 Gm45557-201ENSMUST00000210004 1651 ntBASIC0.96□□□□□ -2.26
Use1Q9CQ56 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
Use1Q9CQ56 Gm22477-201ENSMUST00000122569 316 ntBASIC0.95□□□□□ -2.26
Use1Q9CQ56 Gm25663-201ENSMUST00000157698 135 ntBASIC0.95□□□□□ -2.26
Use1Q9CQ56 Gm24020-201ENSMUST00000180156 108 ntBASIC0.95□□□□□ -2.26
Use1Q9CQ56 Gm27793-201ENSMUST00000183405 76 ntBASIC0.95□□□□□ -2.26
Use1Q9CQ56 Gm28344-201ENSMUST00000185704 279 ntBASIC0.95□□□□□ -2.26
Use1Q9CQ56 Gm38041-201ENSMUST00000194445 661 ntBASIC0.95□□□□□ -2.26
Use1Q9CQ56 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
Use1Q9CQ56 Gm37399-201ENSMUST00000195224 416 ntBASIC0.95□□□□□ -2.26
Use1Q9CQ56 AC139186.1-201ENSMUST00000197610 94 ntBASIC0.95□□□□□ -2.26
Use1Q9CQ56 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.95□□□□□ -2.26
Use1Q9CQ56 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC0.95□□□□□ -2.26
Use1Q9CQ56 AC173345.2-201ENSMUST00000222795 153 ntBASIC0.95□□□□□ -2.26
Use1Q9CQ56 AC183092.1-201ENSMUST00000224301 153 ntBASIC0.95□□□□□ -2.26
Use1Q9CQ56 Gm23299-201ENSMUST00000082708 79 ntBASIC0.95□□□□□ -2.26
Use1Q9CQ56 Gm24252-201ENSMUST00000083700 132 ntBASIC0.95□□□□□ -2.26
Use1Q9CQ56 Gm26339-201ENSMUST00000102368 99 ntBASIC0.94□□□□□ -2.26
Use1Q9CQ56 Gm22771-201ENSMUST00000104449 91 ntBASIC0.94□□□□□ -2.26
Use1Q9CQ56 Gm13729-201ENSMUST00000120328 406 ntBASIC0.94□□□□□ -2.26
Use1Q9CQ56 Gm2962-201ENSMUST00000159266 336 ntBASIC0.94□□□□□ -2.26
Use1Q9CQ56 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC0.94□□□□□ -2.26
Use1Q9CQ56 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.94□□□□□ -2.26
Use1Q9CQ56 Gm26200-201ENSMUST00000180273 79 ntBASIC0.94□□□□□ -2.26
Use1Q9CQ56 Gm11392-201ENSMUST00000181419 710 ntBASIC0.94□□□□□ -2.26
Use1Q9CQ56 Gm38274-201ENSMUST00000195689 148 ntBASIC0.94□□□□□ -2.26
Use1Q9CQ56 Igkv15-102-201ENSMUST00000197885 287 ntBASIC0.94□□□□□ -2.26
Use1Q9CQ56 Mir22-201ENSMUST00000083595 95 ntBASIC0.94□□□□□ -2.26
Use1Q9CQ56 Gm18360-201ENSMUST00000173327 1524 ntBASIC0.94□□□□□ -2.26
Use1Q9CQ56 Gm44177-201ENSMUST00000204338 2667 ntBASIC0.93□□□□□ -2.26
Use1Q9CQ56 Gm13967-201ENSMUST00000120404 380 ntBASIC0.93□□□□□ -2.26
Use1Q9CQ56 Gm14269-201ENSMUST00000120455 306 ntBASIC0.93□□□□□ -2.26
Use1Q9CQ56 Gm22136-201ENSMUST00000158751 268 ntBASIC0.93□□□□□ -2.26
Use1Q9CQ56 Gm22403-201ENSMUST00000174919 84 ntBASIC0.93□□□□□ -2.26
Use1Q9CQ56 Gm23289-201ENSMUST00000175615 108 ntBASIC0.93□□□□□ -2.26
Use1Q9CQ56 Gm26335-201ENSMUST00000178449 107 ntBASIC0.93□□□□□ -2.26
Use1Q9CQ56 Gm28794-201ENSMUST00000185276 136 ntBASIC0.93□□□□□ -2.26
Use1Q9CQ56 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
Use1Q9CQ56 Gm43602-201ENSMUST00000196772 300 ntBASIC0.93□□□□□ -2.26
Use1Q9CQ56 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
Use1Q9CQ56 Gm42857-201ENSMUST00000200823 339 ntBASIC0.93□□□□□ -2.26
Use1Q9CQ56 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
Use1Q9CQ56 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
Use1Q9CQ56 Gm4746-201ENSMUST00000120395 2406 ntBASIC0.92□□□□□ -2.26
Use1Q9CQ56 n-R5s67-201ENSMUST00000104336 114 ntBASIC0.92□□□□□ -2.26
Use1Q9CQ56 Snord98-201ENSMUST00000116819 65 ntBASIC0.92□□□□□ -2.26
Use1Q9CQ56 Gm12512-201ENSMUST00000119620 217 ntBASIC0.92□□□□□ -2.26
Use1Q9CQ56 Gm14922-201ENSMUST00000121131 163 ntBASIC0.92□□□□□ -2.26
Use1Q9CQ56 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.92□□□□□ -2.26
Use1Q9CQ56 Gm27313-201ENSMUST00000183500 142 ntBASIC0.92□□□□□ -2.26
Use1Q9CQ56 Mir6380-201ENSMUST00000184334 81 ntBASIC0.92□□□□□ -2.26
Use1Q9CQ56 Gm27640-201ENSMUST00000184580 147 ntBASIC0.92□□□□□ -2.26
Use1Q9CQ56 Gm18185-201ENSMUST00000186725 667 ntBASIC0.92□□□□□ -2.26
Use1Q9CQ56 Gm24038-201ENSMUST00000082872 159 ntBASIC0.92□□□□□ -2.26
Use1Q9CQ56 Gm24261-201ENSMUST00000083744 104 ntBASIC0.92□□□□□ -2.26
Use1Q9CQ56 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
Use1Q9CQ56 Mir343-201ENSMUST00000102360 75 ntBASIC0.91□□□□□ -2.26
Use1Q9CQ56 Gm11891-201ENSMUST00000121241 619 ntBASIC0.91□□□□□ -2.26
Use1Q9CQ56 Gm27926-201ENSMUST00000157180 66 ntBASIC0.91□□□□□ -2.26
Use1Q9CQ56 Gm25486-201ENSMUST00000158726 63 ntBASIC0.91□□□□□ -2.26
Use1Q9CQ56 Gm24308-201ENSMUST00000177773 114 ntBASIC0.91□□□□□ -2.26
Use1Q9CQ56 Gm37918-201ENSMUST00000192071 120 ntBASIC0.91□□□□□ -2.26
Use1Q9CQ56 Gm36953-201ENSMUST00000195295 268 ntBASIC0.91□□□□□ -2.26
Use1Q9CQ56 AC125020.2-201ENSMUST00000218894 348 ntBASIC0.91□□□□□ -2.26
Use1Q9CQ56 AC167192.2-201ENSMUST00000224794 198 ntBASIC0.91□□□□□ -2.26
Use1Q9CQ56 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC0.9□□□□□ -2.26
Use1Q9CQ56 Gm11410-201ENSMUST00000120053 1143 ntBASIC0.9□□□□□ -2.27
Use1Q9CQ56 Gm14287-201ENSMUST00000121060 117 ntBASIC0.9□□□□□ -2.27
Use1Q9CQ56 Gm25102-201ENSMUST00000122479 112 ntBASIC0.9□□□□□ -2.27
Use1Q9CQ56 Gm23106-201ENSMUST00000157554 101 ntBASIC0.9□□□□□ -2.27
Use1Q9CQ56 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.9□□□□□ -2.27
Use1Q9CQ56 Gm27420-201ENSMUST00000183823 79 ntBASIC0.9□□□□□ -2.27
Use1Q9CQ56 Mir3569-201ENSMUST00000185080 58 ntBASIC0.9□□□□□ -2.27
Use1Q9CQ56 Gm42719-201ENSMUST00000197393 355 ntBASIC0.9□□□□□ -2.27
Use1Q9CQ56 Gm44830-201ENSMUST00000207667 584 ntBASIC0.9□□□□□ -2.27
Use1Q9CQ56 Gm18113-201ENSMUST00000220630 303 ntBASIC0.9□□□□□ -2.27
Use1Q9CQ56 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
Use1Q9CQ56 Gm22306-201ENSMUST00000082692 107 ntBASIC0.9□□□□□ -2.27
Use1Q9CQ56 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
Use1Q9CQ56 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC0.89□□□□□ -2.27
Use1Q9CQ56 Gm23230-201ENSMUST00000157298 133 ntBASIC0.89□□□□□ -2.27
Use1Q9CQ56 Gm23893-201ENSMUST00000158106 134 ntBASIC0.89□□□□□ -2.27
Use1Q9CQ56 Gm22841-201ENSMUST00000158443 62 ntBASIC0.89□□□□□ -2.27
Use1Q9CQ56 Gm17148-201ENSMUST00000164702 249 ntBASIC0.89□□□□□ -2.27
Use1Q9CQ56 Gm27271-201ENSMUST00000183509 170 ntBASIC0.89□□□□□ -2.27
Use1Q9CQ56 Gm27919-201ENSMUST00000185163 107 ntBASIC0.89□□□□□ -2.27
Use1Q9CQ56 Gm28343-201ENSMUST00000185386 112 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms