| Hint3 | Q9CPS6 | CT030687.1-201 | ENSMUST00000221854 | 162 nt | BASIC | 1.78 | □□□□□ -2.12 | | |
| Hint3 | Q9CPS6 | AC173345.2-201 | ENSMUST00000222795 | 153 nt | BASIC | 1.78 | □□□□□ -2.12 | | |
| Hint3 | Q9CPS6 | AC183092.1-201 | ENSMUST00000224301 | 153 nt | BASIC | 1.78 | □□□□□ -2.12 | | |
| Hint3 | Q9CPS6 | 2210407C18Rik-201 | ENSMUST00000048801 | 876 nt | APPRIS P1 TSL 1 (best) BASIC | 1.78 | □□□□□ -2.12 | | |
| Hint3 | Q9CPS6 | Gm25079-201 | ENSMUST00000082529 | 203 nt | BASIC | 1.78 | □□□□□ -2.12 | | |
| Hint3 | Q9CPS6 | Gm19194-201 | ENSMUST00000192015 | 3774 nt | BASIC | 1.77 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gpr174-202 | ENSMUST00000117310 | 3536 nt | APPRIS P1 TSL 1 (best) BASIC | 1.77 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm24984-201 | ENSMUST00000104454 | 133 nt | BASIC | 1.77 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm12647-201 | ENSMUST00000118977 | 265 nt | BASIC | 1.77 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm23048-201 | ENSMUST00000157237 | 129 nt | BASIC | 1.77 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm26150-201 | ENSMUST00000157426 | 151 nt | BASIC | 1.77 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm24770-201 | ENSMUST00000158505 | 92 nt | BASIC | 1.77 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Ear-ps4-201 | ENSMUST00000166834 | 450 nt | BASIC | 1.77 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm17161-201 | ENSMUST00000169187 | 524 nt | BASIC | 1.77 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm17919-201 | ENSMUST00000173344 | 312 nt | BASIC | 1.77 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm26435-201 | ENSMUST00000179026 | 107 nt | BASIC | 1.77 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | 6430573P05Rik-201 | ENSMUST00000192562 | 508 nt | TSL 5 BASIC | 1.77 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm44473-201 | ENSMUST00000204039 | 152 nt | BASIC | 1.77 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm45456-201 | ENSMUST00000210841 | 243 nt | BASIC | 1.77 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm46997-201 | ENSMUST00000222108 | 217 nt | BASIC | 1.77 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | AC158981.3-202 | ENSMUST00000228906 | 523 nt | BASIC | 1.77 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm22683-201 | ENSMUST00000082854 | 137 nt | BASIC | 1.77 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm10542-201 | ENSMUST00000097586 | 273 nt | APPRIS P1 TSL 5 BASIC | 1.77 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Vmn1r185-210 | ENSMUST00000228367 | 6982 nt | APPRIS P1 BASIC | 1.77 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Olfr1442-204 | ENSMUST00000208657 | 3148 nt | APPRIS P1 TSL 3 BASIC | 1.77 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm25090-201 | ENSMUST00000104000 | 132 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm23013-201 | ENSMUST00000104146 | 106 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm25836-201 | ENSMUST00000158918 | 123 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm17052-201 | ENSMUST00000165496 | 289 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm21885-201 | ENSMUST00000178891 | 327 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | C920009B18Rik-204 | ENSMUST00000181733 | 123 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm29347-201 | ENSMUST00000186695 | 449 nt | TSL 3 BASIC | 1.76 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | AC132437.1-201 | ENSMUST00000218308 | 320 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | AC165293.1-201 | ENSMUST00000219669 | 329 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm14327-201 | ENSMUST00000099001 | 192 nt | TSL 5 BASIC | 1.76 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm43046-201 | ENSMUST00000198771 | 2451 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | A630081D01Rik-201 | ENSMUST00000195842 | 1833 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Ppp4r3c-ps-201 | ENSMUST00000151416 | 2445 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm11572-201 | ENSMUST00000119164 | 120 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm13467-201 | ENSMUST00000145568 | 281 nt | TSL 5 BASIC | 1.75 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm22281-201 | ENSMUST00000157198 | 103 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm26405-201 | ENSMUST00000158495 | 100 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Vmn2r-ps65-201 | ENSMUST00000173309 | 220 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm22114-201 | ENSMUST00000177756 | 107 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Mir6995-201 | ENSMUST00000183658 | 71 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm27544-201 | ENSMUST00000185069 | 155 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Mir7021-201 | ENSMUST00000197026 | 63 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm45654-201 | ENSMUST00000210980 | 123 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm25078-201 | ENSMUST00000082530 | 107 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm24355-201 | ENSMUST00000082858 | 122 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm24536-201 | ENSMUST00000083144 | 107 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm25789-201 | ENSMUST00000083294 | 76 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Snhg14-209 | ENSMUST00000188976 | 2193 nt | TSL 1 (best) BASIC | 1.75 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Olfr948-202 | ENSMUST00000216132 | 4164 nt | APPRIS P1 TSL 5 BASIC | 1.74 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm15067-201 | ENSMUST00000119534 | 156 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm24630-201 | ENSMUST00000122768 | 106 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm8121-201 | ENSMUST00000153583 | 499 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Rnu7-201 | ENSMUST00000158458 | 62 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm20477-201 | ENSMUST00000174028 | 280 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Mir9-3-201 | ENSMUST00000175497 | 90 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm25450-201 | ENSMUST00000179144 | 107 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm37579-201 | ENSMUST00000194291 | 142 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm7240-201 | ENSMUST00000220769 | 664 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | AC122393.1-201 | ENSMUST00000226570 | 319 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Sva-201 | ENSMUST00000024059 | 651 nt | APPRIS P2 TSL 1 (best) BASIC | 1.74 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm24151-201 | ENSMUST00000082758 | 141 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Snord118-201 | ENSMUST00000082965 | 135 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm22723-201 | ENSMUST00000083820 | 129 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Tlr8-201 | ENSMUST00000049023 | 3158 nt | APPRIS P1 TSL 1 (best) BASIC | 1.74 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm23010-201 | ENSMUST00000104151 | 126 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm12143-201 | ENSMUST00000119666 | 332 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm14678-201 | ENSMUST00000121396 | 482 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm3848-201 | ENSMUST00000136693 | 299 nt | TSL 1 (best) BASIC | 1.73 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm23670-201 | ENSMUST00000157469 | 119 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm22217-201 | ENSMUST00000157556 | 313 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm24783-201 | ENSMUST00000157639 | 100 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm26024-201 | ENSMUST00000158657 | 322 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm24818-201 | ENSMUST00000175093 | 161 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Snord87-201 | ENSMUST00000175437 | 87 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm5900-201 | ENSMUST00000179862 | 375 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm26864-201 | ENSMUST00000181346 | 156 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Mir6905-201 | ENSMUST00000184228 | 70 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Mir6352-201 | ENSMUST00000184495 | 116 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm27640-201 | ENSMUST00000184580 | 147 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm37918-201 | ENSMUST00000192071 | 120 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm43035-201 | ENSMUST00000197626 | 517 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm44468-201 | ENSMUST00000199516 | 105 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm35736-201 | ENSMUST00000203681 | 313 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | AC173482.4-201 | ENSMUST00000225096 | 348 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | AC149294.9-201 | ENSMUST00000227256 | 164 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm26922-201 | ENSMUST00000082687 | 72 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Agmo-201 | ENSMUST00000049874 | 2423 nt | APPRIS P1 TSL 1 (best) BASIC | 1.73 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm43484-201 | ENSMUST00000198333 | 5966 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | AC102369.2-201 | ENSMUST00000219725 | 1679 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Vmn1r-ps125-201 | ENSMUST00000117767 | 290 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm14773-201 | ENSMUST00000125932 | 451 nt | TSL 2 BASIC | 1.72 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm24394-201 | ENSMUST00000158141 | 123 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm23759-201 | ENSMUST00000158351 | 268 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Gm25491-201 | ENSMUST00000158733 | 308 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| Hint3 | Q9CPS6 | Mir7679-201 | ENSMUST00000183379 | 63 nt | BASIC | 1.72 | □□□□□ -2.13 | | |