Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Gm23435-201ENSMUST00000157183 156 ntBASIC1.45□□□□□ -2.18
Sf3b1Q99NB9 Gm25914-201ENSMUST00000157618 153 ntBASIC1.45□□□□□ -2.18
Sf3b1Q99NB9 Gm25491-201ENSMUST00000158733 308 ntBASIC1.45□□□□□ -2.18
Sf3b1Q99NB9 Gm23660-201ENSMUST00000178362 79 ntBASIC1.45□□□□□ -2.18
Sf3b1Q99NB9 Gm24799-201ENSMUST00000178431 79 ntBASIC1.45□□□□□ -2.18
Sf3b1Q99NB9 Gm24088-201ENSMUST00000179100 79 ntBASIC1.45□□□□□ -2.18
Sf3b1Q99NB9 Gm27894-201ENSMUST00000184177 92 ntBASIC1.45□□□□□ -2.18
Sf3b1Q99NB9 Gm43723-201ENSMUST00000196886 189 ntBASIC1.45□□□□□ -2.18
Sf3b1Q99NB9 Gm44010-201ENSMUST00000204432 331 ntBASIC1.45□□□□□ -2.18
Sf3b1Q99NB9 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Sf3b1Q99NB9 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.45□□□□□ -2.18
Sf3b1Q99NB9 Gm42755-201ENSMUST00000198533 1493 ntBASIC1.45□□□□□ -2.18
Sf3b1Q99NB9 Mir343-201ENSMUST00000102360 75 ntBASIC1.44□□□□□ -2.18
Sf3b1Q99NB9 Gm9059-201ENSMUST00000118319 183 ntBASIC1.44□□□□□ -2.18
Sf3b1Q99NB9 Gm24632-201ENSMUST00000122770 323 ntBASIC1.44□□□□□ -2.18
Sf3b1Q99NB9 Gm23390-201ENSMUST00000157393 106 ntBASIC1.44□□□□□ -2.18
Sf3b1Q99NB9 Gm24551-201ENSMUST00000158645 92 ntBASIC1.44□□□□□ -2.18
Sf3b1Q99NB9 Mir1936-201ENSMUST00000158699 93 ntBASIC1.44□□□□□ -2.18
Sf3b1Q99NB9 Igkv17-134-201ENSMUST00000168310 348 ntBASIC1.44□□□□□ -2.18
Sf3b1Q99NB9 Gm35736-201ENSMUST00000203681 313 ntBASIC1.44□□□□□ -2.18
Sf3b1Q99NB9 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.44□□□□□ -2.18
Sf3b1Q99NB9 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.44□□□□□ -2.18
Sf3b1Q99NB9 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.44□□□□□ -2.18
Sf3b1Q99NB9 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.44□□□□□ -2.18
Sf3b1Q99NB9 Gm14296-202ENSMUST00000108931 750 ntBASIC1.43□□□□□ -2.18
Sf3b1Q99NB9 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC1.43□□□□□ -2.18
Sf3b1Q99NB9 Gm23170-201ENSMUST00000157158 106 ntBASIC1.43□□□□□ -2.18
Sf3b1Q99NB9 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC1.43□□□□□ -2.18
Sf3b1Q99NB9 Gm20462-201ENSMUST00000172623 408 ntBASIC1.43□□□□□ -2.18
Sf3b1Q99NB9 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Sf3b1Q99NB9 Gm28257-201ENSMUST00000185244 463 ntBASIC1.43□□□□□ -2.18
Sf3b1Q99NB9 Gm44654-201ENSMUST00000208052 329 ntBASIC1.43□□□□□ -2.18
Sf3b1Q99NB9 AC122905.2-201ENSMUST00000220325 269 ntBASIC1.43□□□□□ -2.18
Sf3b1Q99NB9 AC166358.7-201ENSMUST00000221132 108 ntBASIC1.43□□□□□ -2.18
Sf3b1Q99NB9 AC125543.5-201ENSMUST00000222799 108 ntBASIC1.43□□□□□ -2.18
Sf3b1Q99NB9 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.43□□□□□ -2.18
Sf3b1Q99NB9 Gm24625-201ENSMUST00000082622 130 ntBASIC1.43□□□□□ -2.18
Sf3b1Q99NB9 Mir221-201ENSMUST00000083488 95 ntBASIC1.43□□□□□ -2.18
Sf3b1Q99NB9 Gm26164-201ENSMUST00000083793 104 ntBASIC1.43□□□□□ -2.18
Sf3b1Q99NB9 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.43□□□□□ -2.18
Sf3b1Q99NB9 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Sf3b1Q99NB9 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC1.42□□□□□ -2.18
Sf3b1Q99NB9 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC1.42□□□□□ -2.18
Sf3b1Q99NB9 Gm13396-201ENSMUST00000120617 271 ntBASIC1.42□□□□□ -2.18
Sf3b1Q99NB9 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
Sf3b1Q99NB9 Gm24677-201ENSMUST00000158755 150 ntBASIC1.42□□□□□ -2.18
Sf3b1Q99NB9 Gm24510-201ENSMUST00000174965 94 ntBASIC1.42□□□□□ -2.18
Sf3b1Q99NB9 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
Sf3b1Q99NB9 Gm24618-201ENSMUST00000177718 94 ntBASIC1.42□□□□□ -2.18
Sf3b1Q99NB9 Gm23953-201ENSMUST00000178214 94 ntBASIC1.42□□□□□ -2.18
Sf3b1Q99NB9 Gm26332-201ENSMUST00000179813 94 ntBASIC1.42□□□□□ -2.18
Sf3b1Q99NB9 Gm22863-201ENSMUST00000180265 94 ntBASIC1.42□□□□□ -2.18
Sf3b1Q99NB9 Gm27421-201ENSMUST00000184729 167 ntBASIC1.42□□□□□ -2.18
Sf3b1Q99NB9 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC1.42□□□□□ -2.18
Sf3b1Q99NB9 AC153526.1-201ENSMUST00000219750 190 ntBASIC1.42□□□□□ -2.18
Sf3b1Q99NB9 AC151833.1-201ENSMUST00000227752 574 ntBASIC1.42□□□□□ -2.18
Sf3b1Q99NB9 AC154515.1-201ENSMUST00000226085 2841 ntBASIC1.42□□□□□ -2.18
Sf3b1Q99NB9 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Sf3b1Q99NB9 Gm24229-201ENSMUST00000158830 118 ntBASIC1.41□□□□□ -2.18
Sf3b1Q99NB9 Gm25936-201ENSMUST00000179952 114 ntBASIC1.41□□□□□ -2.18
Sf3b1Q99NB9 Gm28489-201ENSMUST00000186655 316 ntBASIC1.41□□□□□ -2.18
Sf3b1Q99NB9 Gm43367-201ENSMUST00000199986 625 ntBASIC1.41□□□□□ -2.18
Sf3b1Q99NB9 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC1.41□□□□□ -2.18
Sf3b1Q99NB9 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.41□□□□□ -2.18
Sf3b1Q99NB9 Gm24152-201ENSMUST00000082764 163 ntBASIC1.41□□□□□ -2.18
Sf3b1Q99NB9 Gm23721-201ENSMUST00000083005 107 ntBASIC1.41□□□□□ -2.18
Sf3b1Q99NB9 Mir133a-1-201ENSMUST00000083465 68 ntBASIC1.41□□□□□ -2.18
Sf3b1Q99NB9 Gm4746-201ENSMUST00000120395 2406 ntBASIC1.41□□□□□ -2.18
Sf3b1Q99NB9 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.41□□□□□ -2.18
Sf3b1Q99NB9 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Sf3b1Q99NB9 Gm26500-201ENSMUST00000101867 106 ntBASIC1.4□□□□□ -2.18
Sf3b1Q99NB9 Mir653-201ENSMUST00000102402 85 ntBASIC1.4□□□□□ -2.18
Sf3b1Q99NB9 Gm22228-201ENSMUST00000157364 101 ntBASIC1.4□□□□□ -2.18
Sf3b1Q99NB9 Gm22315-201ENSMUST00000158010 143 ntBASIC1.4□□□□□ -2.18
Sf3b1Q99NB9 Mir6240-201ENSMUST00000184281 117 ntBASIC1.4□□□□□ -2.18
Sf3b1Q99NB9 Gm28453-203ENSMUST00000187041 189 ntBASIC1.4□□□□□ -2.18
Sf3b1Q99NB9 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.4□□□□□ -2.18
Sf3b1Q99NB9 Gm29037-201ENSMUST00000189092 313 ntBASIC1.4□□□□□ -2.18
Sf3b1Q99NB9 Gm23370-201ENSMUST00000199545 130 ntBASIC1.4□□□□□ -2.18
Sf3b1Q99NB9 Gm43406-201ENSMUST00000200356 334 ntBASIC1.4□□□□□ -2.18
Sf3b1Q99NB9 AC155712.1-201ENSMUST00000219704 160 ntBASIC1.4□□□□□ -2.18
Sf3b1Q99NB9 Gm46997-201ENSMUST00000222108 217 ntBASIC1.4□□□□□ -2.18
Sf3b1Q99NB9 AC173345.2-201ENSMUST00000222795 153 ntBASIC1.4□□□□□ -2.18
Sf3b1Q99NB9 AC183092.1-201ENSMUST00000224301 153 ntBASIC1.4□□□□□ -2.18
Sf3b1Q99NB9 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.4□□□□□ -2.19
Sf3b1Q99NB9 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Sf3b1Q99NB9 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Sf3b1Q99NB9 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
Sf3b1Q99NB9 Gm25909-201ENSMUST00000157619 121 ntBASIC1.4□□□□□ -2.19
Sf3b1Q99NB9 Gm23083-201ENSMUST00000157851 116 ntBASIC1.4□□□□□ -2.19
Sf3b1Q99NB9 Gm24853-201ENSMUST00000158026 121 ntBASIC1.4□□□□□ -2.19
Sf3b1Q99NB9 Gm17052-201ENSMUST00000165496 289 ntBASIC1.4□□□□□ -2.19
Sf3b1Q99NB9 Gm24154-201ENSMUST00000175261 130 ntBASIC1.4□□□□□ -2.19
Sf3b1Q99NB9 Gm18291-201ENSMUST00000190791 301 ntBASIC1.4□□□□□ -2.19
Sf3b1Q99NB9 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Sf3b1Q99NB9 Gm23766-201ENSMUST00000103894 80 ntBASIC1.39□□□□□ -2.19
Sf3b1Q99NB9 Gm22780-201ENSMUST00000104084 132 ntBASIC1.39□□□□□ -2.19
Sf3b1Q99NB9 Mir1b-201ENSMUST00000117012 122 ntBASIC1.39□□□□□ -2.19
Sf3b1Q99NB9 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.39□□□□□ -2.19
Sf3b1Q99NB9 Gm22281-201ENSMUST00000157198 103 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 118.5 ms