Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gm44256-201ENSMUST00000203304 335 ntBASIC2.05□□□□□ -2.08
Cstf3Q99LI7 Gm45543-201ENSMUST00000209327 88 ntBASIC2.05□□□□□ -2.08
Cstf3Q99LI7 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.05□□□□□ -2.08
Cstf3Q99LI7 Gm24615-201ENSMUST00000083268 113 ntBASIC2.05□□□□□ -2.08
Cstf3Q99LI7 Gm43706-201ENSMUST00000198767 2652 ntBASIC2.04□□□□□ -2.08
Cstf3Q99LI7 Gm22101-201ENSMUST00000157928 103 ntBASIC2.04□□□□□ -2.08
Cstf3Q99LI7 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC2.04□□□□□ -2.08
Cstf3Q99LI7 Gm2719-201ENSMUST00000191929 444 ntBASIC2.04□□□□□ -2.08
Cstf3Q99LI7 Gm45313-201ENSMUST00000210584 178 ntBASIC2.04□□□□□ -2.08
Cstf3Q99LI7 Gm46997-201ENSMUST00000222108 217 ntBASIC2.04□□□□□ -2.08
Cstf3Q99LI7 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.04□□□□□ -2.08
Cstf3Q99LI7 Gm23679-201ENSMUST00000083161 119 ntBASIC2.04□□□□□ -2.08
Cstf3Q99LI7 Gm23970-201ENSMUST00000083319 107 ntBASIC2.04□□□□□ -2.08
Cstf3Q99LI7 Snora69-201ENSMUST00000083708 131 ntBASIC2.04□□□□□ -2.08
Cstf3Q99LI7 Gm24164-201ENSMUST00000093663 104 ntBASIC2.04□□□□□ -2.08
Cstf3Q99LI7 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Cstf3Q99LI7 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.03□□□□□ -2.08
Cstf3Q99LI7 Gm24237-201ENSMUST00000157790 132 ntBASIC2.03□□□□□ -2.08
Cstf3Q99LI7 Gm24225-201ENSMUST00000158825 98 ntBASIC2.03□□□□□ -2.08
Cstf3Q99LI7 Mir3092-201ENSMUST00000174954 96 ntBASIC2.03□□□□□ -2.08
Cstf3Q99LI7 Gm24333-201ENSMUST00000175101 84 ntBASIC2.03□□□□□ -2.08
Cstf3Q99LI7 Gm23090-201ENSMUST00000177331 78 ntBASIC2.03□□□□□ -2.08
Cstf3Q99LI7 Mir3970-201ENSMUST00000199287 90 ntBASIC2.03□□□□□ -2.08
Cstf3Q99LI7 Mir497-201ENSMUST00000200557 84 ntBASIC2.03□□□□□ -2.08
Cstf3Q99LI7 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC2.03□□□□□ -2.08
Cstf3Q99LI7 AC164086.1-201ENSMUST00000221038 289 ntBASIC2.03□□□□□ -2.08
Cstf3Q99LI7 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Cstf3Q99LI7 Gm26497-201ENSMUST00000083146 107 ntBASIC2.03□□□□□ -2.08
Cstf3Q99LI7 Gm11904-201ENSMUST00000120562 248 ntBASIC2.02□□□□□ -2.09
Cstf3Q99LI7 Gm14919-201ENSMUST00000120839 390 ntBASIC2.02□□□□□ -2.09
Cstf3Q99LI7 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Cstf3Q99LI7 Gm24010-201ENSMUST00000157731 282 ntBASIC2.02□□□□□ -2.09
Cstf3Q99LI7 Gm17052-201ENSMUST00000165496 289 ntBASIC2.02□□□□□ -2.09
Cstf3Q99LI7 Gm23963-201ENSMUST00000179603 77 ntBASIC2.02□□□□□ -2.09
Cstf3Q99LI7 Gm27399-201ENSMUST00000184250 78 ntBASIC2.02□□□□□ -2.09
Cstf3Q99LI7 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC2.02□□□□□ -2.09
Cstf3Q99LI7 Mir465d-201ENSMUST00000196314 58 ntBASIC2.02□□□□□ -2.09
Cstf3Q99LI7 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Cstf3Q99LI7 Gm43587-201ENSMUST00000199590 204 ntBASIC2.02□□□□□ -2.09
Cstf3Q99LI7 Gm44533-201ENSMUST00000207782 268 ntBASIC2.02□□□□□ -2.09
Cstf3Q99LI7 Gm45456-201ENSMUST00000210841 243 ntBASIC2.02□□□□□ -2.09
Cstf3Q99LI7 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC2.02□□□□□ -2.09
Cstf3Q99LI7 Gm24698-201ENSMUST00000083883 130 ntBASIC2.02□□□□□ -2.09
Cstf3Q99LI7 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Cstf3Q99LI7 AC154515.1-201ENSMUST00000226085 2841 ntBASIC2.01□□□□□ -2.09
Cstf3Q99LI7 Gm24907-201ENSMUST00000116932 128 ntBASIC2.01□□□□□ -2.09
Cstf3Q99LI7 Gm22027-201ENSMUST00000122737 127 ntBASIC2.01□□□□□ -2.09
Cstf3Q99LI7 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
Cstf3Q99LI7 Gm7958-201ENSMUST00000178255 468 ntBASIC2.01□□□□□ -2.09
Cstf3Q99LI7 Gm22510-201ENSMUST00000179304 79 ntBASIC2.01□□□□□ -2.09
Cstf3Q99LI7 Gm26336-201ENSMUST00000179449 79 ntBASIC2.01□□□□□ -2.09
Cstf3Q99LI7 Gm26390-201ENSMUST00000179628 79 ntBASIC2.01□□□□□ -2.09
Cstf3Q99LI7 Gm7950-201ENSMUST00000179633 468 ntBASIC2.01□□□□□ -2.09
Cstf3Q99LI7 Gm28992-201ENSMUST00000190534 139 ntBASIC2.01□□□□□ -2.09
Cstf3Q99LI7 Gm44055-201ENSMUST00000204376 247 ntBASIC2.01□□□□□ -2.09
Cstf3Q99LI7 AC173482.4-201ENSMUST00000225096 348 ntBASIC2.01□□□□□ -2.09
Cstf3Q99LI7 AC115735.2-201ENSMUST00000227135 351 ntBASIC2.01□□□□□ -2.09
Cstf3Q99LI7 Gm25402-201ENSMUST00000082966 131 ntBASIC2.01□□□□□ -2.09
Cstf3Q99LI7 Snord7-201ENSMUST00000083781 97 ntBASIC2.01□□□□□ -2.09
Cstf3Q99LI7 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Cstf3Q99LI7 Gm42770-201ENSMUST00000199657 4155 ntBASIC2□□□□□ -2.09
Cstf3Q99LI7 Gm25460-201ENSMUST00000157954 127 ntBASIC2□□□□□ -2.09
Cstf3Q99LI7 Mir7016-201ENSMUST00000184308 72 ntBASIC2□□□□□ -2.09
Cstf3Q99LI7 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC2□□□□□ -2.09
Cstf3Q99LI7 Gm28453-203ENSMUST00000187041 189 ntBASIC2□□□□□ -2.09
Cstf3Q99LI7 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC2□□□□□ -2.09
Cstf3Q99LI7 Snord43-201ENSMUST00000199549 108 ntBASIC2□□□□□ -2.09
Cstf3Q99LI7 Gm43865-201ENSMUST00000204721 127 ntBASIC2□□□□□ -2.09
Cstf3Q99LI7 AC161426.1-201ENSMUST00000214137 286 ntBASIC2□□□□□ -2.09
Cstf3Q99LI7 AC134601.3-201ENSMUST00000221682 154 ntBASIC2□□□□□ -2.09
Cstf3Q99LI7 Gm11351-202ENSMUST00000225724 478 ntBASIC2□□□□□ -2.09
Cstf3Q99LI7 Gm10222-201ENSMUST00000088336 294 ntBASIC2□□□□□ -2.09
Cstf3Q99LI7 Gm43373-201ENSMUST00000202552 2870 ntBASIC2□□□□□ -2.09
Cstf3Q99LI7 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2□□□□□ -2.09
Cstf3Q99LI7 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
Cstf3Q99LI7 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Cstf3Q99LI7 Gm22494-201ENSMUST00000104495 128 ntBASIC1.99□□□□□ -2.09
Cstf3Q99LI7 Gm26479-201ENSMUST00000122620 106 ntBASIC1.99□□□□□ -2.09
Cstf3Q99LI7 Gm22883-201ENSMUST00000157376 106 ntBASIC1.99□□□□□ -2.09
Cstf3Q99LI7 Gm22159-201ENSMUST00000158412 130 ntBASIC1.99□□□□□ -2.09
Cstf3Q99LI7 Gm23581-201ENSMUST00000158531 63 ntBASIC1.99□□□□□ -2.09
Cstf3Q99LI7 Gm23342-201ENSMUST00000158958 115 ntBASIC1.99□□□□□ -2.09
Cstf3Q99LI7 Gm37889-201ENSMUST00000194174 251 ntBASIC1.99□□□□□ -2.09
Cstf3Q99LI7 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.99□□□□□ -2.09
Cstf3Q99LI7 Gm44477-201ENSMUST00000199661 110 ntBASIC1.99□□□□□ -2.09
Cstf3Q99LI7 Gm25813-201ENSMUST00000082748 191 ntBASIC1.99□□□□□ -2.09
Cstf3Q99LI7 Gm26493-201ENSMUST00000083155 136 ntBASIC1.99□□□□□ -2.09
Cstf3Q99LI7 Mir30d-201ENSMUST00000083503 82 ntBASIC1.99□□□□□ -2.09
Cstf3Q99LI7 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Cstf3Q99LI7 Gm25875-201ENSMUST00000104323 107 ntBASIC1.98□□□□□ -2.09
Cstf3Q99LI7 Gm25111-201ENSMUST00000116686 147 ntBASIC1.98□□□□□ -2.09
Cstf3Q99LI7 Gm8121-201ENSMUST00000153583 499 ntBASIC1.98□□□□□ -2.09
Cstf3Q99LI7 Gm25392-201ENSMUST00000157335 297 ntBASIC1.98□□□□□ -2.09
Cstf3Q99LI7 Rnu7-201ENSMUST00000158458 62 ntBASIC1.98□□□□□ -2.09
Cstf3Q99LI7 Gm25491-201ENSMUST00000158733 308 ntBASIC1.98□□□□□ -2.09
Cstf3Q99LI7 Gm45013-201ENSMUST00000206883 178 ntBASIC1.98□□□□□ -2.09
Cstf3Q99LI7 Gm45344-201ENSMUST00000211610 341 ntBASIC1.98□□□□□ -2.09
Cstf3Q99LI7 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.98□□□□□ -2.09
Cstf3Q99LI7 Gm24412-201ENSMUST00000083426 109 ntBASIC1.98□□□□□ -2.09
Cstf3Q99LI7 Mir429-201ENSMUST00000083493 83 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 128 ms