Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm38395-201ENSMUST00000199904 830 ntBASIC0.76□□□□□ -2.29
Ccdc28aQ8CEI3 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC0.76□□□□□ -2.29
Ccdc28aQ8CEI3 AC120394.1-201ENSMUST00000217153 351 ntBASIC0.76□□□□□ -2.29
Ccdc28aQ8CEI3 CT009718.4-201ENSMUST00000221881 109 ntBASIC0.76□□□□□ -2.29
Ccdc28aQ8CEI3 AC168056.1-201ENSMUST00000225270 180 ntBASIC0.76□□□□□ -2.29
Ccdc28aQ8CEI3 AC163646.2-201ENSMUST00000227962 141 ntBASIC0.76□□□□□ -2.29
Ccdc28aQ8CEI3 Gm23731-201ENSMUST00000083749 107 ntBASIC0.76□□□□□ -2.29
Ccdc28aQ8CEI3 Gm26108-201ENSMUST00000083973 191 ntBASIC0.76□□□□□ -2.29
Ccdc28aQ8CEI3 Gm25207-201ENSMUST00000093745 107 ntBASIC0.76□□□□□ -2.29
Ccdc28aQ8CEI3 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
Ccdc28aQ8CEI3 Gm11512-201ENSMUST00000119669 663 ntBASIC0.75□□□□□ -2.29
Ccdc28aQ8CEI3 Gm24409-201ENSMUST00000157881 152 ntBASIC0.75□□□□□ -2.29
Ccdc28aQ8CEI3 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC0.75□□□□□ -2.29
Ccdc28aQ8CEI3 Gm17052-201ENSMUST00000165496 289 ntBASIC0.75□□□□□ -2.29
Ccdc28aQ8CEI3 Gm20386-201ENSMUST00000174010 132 ntBASIC0.75□□□□□ -2.29
Ccdc28aQ8CEI3 Gm25121-201ENSMUST00000179846 79 ntBASIC0.75□□□□□ -2.29
Ccdc28aQ8CEI3 Gm11392-201ENSMUST00000181419 710 ntBASIC0.75□□□□□ -2.29
Ccdc28aQ8CEI3 Gm27817-201ENSMUST00000184302 233 ntBASIC0.75□□□□□ -2.29
Ccdc28aQ8CEI3 Mir7665-201ENSMUST00000184907 63 ntBASIC0.75□□□□□ -2.29
Ccdc28aQ8CEI3 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC0.75□□□□□ -2.29
Ccdc28aQ8CEI3 Gm28848-201ENSMUST00000189984 168 ntBASIC0.75□□□□□ -2.29
Ccdc28aQ8CEI3 Gm5001-201ENSMUST00000204361 331 ntBASIC0.75□□□□□ -2.29
Ccdc28aQ8CEI3 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC0.75□□□□□ -2.29
Ccdc28aQ8CEI3 Gm45403-201ENSMUST00000209453 276 ntBASIC0.75□□□□□ -2.29
Ccdc28aQ8CEI3 Gm5010-201ENSMUST00000213131 260 ntBASIC0.75□□□□□ -2.29
Ccdc28aQ8CEI3 AC173482.4-201ENSMUST00000225096 348 ntBASIC0.75□□□□□ -2.29
Ccdc28aQ8CEI3 Gm26066-201ENSMUST00000083385 109 ntBASIC0.75□□□□□ -2.29
Ccdc28aQ8CEI3 Gm11389-201ENSMUST00000121407 430 ntBASIC0.74□□□□□ -2.29
Ccdc28aQ8CEI3 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC0.74□□□□□ -2.29
Ccdc28aQ8CEI3 Gm24438-201ENSMUST00000157893 115 ntBASIC0.74□□□□□ -2.29
Ccdc28aQ8CEI3 Gm25486-201ENSMUST00000158726 63 ntBASIC0.74□□□□□ -2.29
Ccdc28aQ8CEI3 Gm25491-201ENSMUST00000158733 308 ntBASIC0.74□□□□□ -2.29
Ccdc28aQ8CEI3 Gm22929-201ENSMUST00000175517 107 ntBASIC0.74□□□□□ -2.29
Ccdc28aQ8CEI3 Gm26435-201ENSMUST00000179026 107 ntBASIC0.74□□□□□ -2.29
Ccdc28aQ8CEI3 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC0.74□□□□□ -2.29
Ccdc28aQ8CEI3 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC0.74□□□□□ -2.29
Ccdc28aQ8CEI3 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC0.74□□□□□ -2.29
Ccdc28aQ8CEI3 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC0.74□□□□□ -2.29
Ccdc28aQ8CEI3 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC0.74□□□□□ -2.29
Ccdc28aQ8CEI3 AC147101.1-201ENSMUST00000217964 312 ntBASIC0.74□□□□□ -2.29
Ccdc28aQ8CEI3 Gm18113-201ENSMUST00000220630 303 ntBASIC0.74□□□□□ -2.29
Ccdc28aQ8CEI3 Gm46997-201ENSMUST00000222108 217 ntBASIC0.74□□□□□ -2.29
Ccdc28aQ8CEI3 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
Ccdc28aQ8CEI3 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC0.73□□□□□ -2.29
Ccdc28aQ8CEI3 Gm14803-201ENSMUST00000117163 361 ntBASIC0.73□□□□□ -2.29
Ccdc28aQ8CEI3 Gm11410-201ENSMUST00000120053 1143 ntBASIC0.73□□□□□ -2.29
Ccdc28aQ8CEI3 Gm25052-201ENSMUST00000122661 158 ntBASIC0.73□□□□□ -2.29
Ccdc28aQ8CEI3 Gm22551-201ENSMUST00000157795 103 ntBASIC0.73□□□□□ -2.29
Ccdc28aQ8CEI3 Mir1936-201ENSMUST00000158699 93 ntBASIC0.73□□□□□ -2.29
Ccdc28aQ8CEI3 Gm27974-201ENSMUST00000183415 105 ntBASIC0.73□□□□□ -2.29
Ccdc28aQ8CEI3 Gm27326-201ENSMUST00000183504 95 ntBASIC0.73□□□□□ -2.29
Ccdc28aQ8CEI3 Gm27919-201ENSMUST00000185163 107 ntBASIC0.73□□□□□ -2.29
Ccdc28aQ8CEI3 Gm28506-201ENSMUST00000189937 150 ntBASIC0.73□□□□□ -2.29
Ccdc28aQ8CEI3 Gm28648-201ENSMUST00000190092 343 ntBASIC0.73□□□□□ -2.29
Ccdc28aQ8CEI3 Gm38113-201ENSMUST00000193704 201 ntBASIC0.73□□□□□ -2.29
Ccdc28aQ8CEI3 Mir7118-201ENSMUST00000197760 61 ntBASIC0.73□□□□□ -2.29
Ccdc28aQ8CEI3 Gm5034-201ENSMUST00000199115 634 ntBASIC0.73□□□□□ -2.29
Ccdc28aQ8CEI3 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC0.73□□□□□ -2.29
Ccdc28aQ8CEI3 Gm18696-201ENSMUST00000220103 274 ntBASIC0.73□□□□□ -2.29
Ccdc28aQ8CEI3 AC159885.1-201ENSMUST00000222221 199 ntBASIC0.73□□□□□ -2.29
Ccdc28aQ8CEI3 AC112972.1-201ENSMUST00000227329 365 ntBASIC0.73□□□□□ -2.29
Ccdc28aQ8CEI3 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC0.73□□□□□ -2.29
Ccdc28aQ8CEI3 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC0.73□□□□□ -2.29
Ccdc28aQ8CEI3 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC0.72□□□□□ -2.29
Ccdc28aQ8CEI3 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
Ccdc28aQ8CEI3 Gm23766-201ENSMUST00000103894 80 ntBASIC0.72□□□□□ -2.29
Ccdc28aQ8CEI3 Gm24579-201ENSMUST00000103964 144 ntBASIC0.72□□□□□ -2.29
Ccdc28aQ8CEI3 Gm11862-201ENSMUST00000119678 659 ntBASIC0.72□□□□□ -2.29
Ccdc28aQ8CEI3 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
Ccdc28aQ8CEI3 Gm25663-201ENSMUST00000157698 135 ntBASIC0.72□□□□□ -2.29
Ccdc28aQ8CEI3 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.72□□□□□ -2.29
Ccdc28aQ8CEI3 Gm24510-201ENSMUST00000174965 94 ntBASIC0.72□□□□□ -2.29
Ccdc28aQ8CEI3 Gm24085-201ENSMUST00000175172 116 ntBASIC0.72□□□□□ -2.29
Ccdc28aQ8CEI3 Gm23267-201ENSMUST00000178490 132 ntBASIC0.72□□□□□ -2.29
Ccdc28aQ8CEI3 Gm27421-201ENSMUST00000184729 167 ntBASIC0.72□□□□□ -2.29
Ccdc28aQ8CEI3 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC0.72□□□□□ -2.29
Ccdc28aQ8CEI3 Mir3087-201ENSMUST00000199405 56 ntBASIC0.72□□□□□ -2.29
Ccdc28aQ8CEI3 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC0.72□□□□□ -2.29
Ccdc28aQ8CEI3 AC154484.1-201ENSMUST00000227311 771 ntBASIC0.72□□□□□ -2.29
Ccdc28aQ8CEI3 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
Ccdc28aQ8CEI3 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
Ccdc28aQ8CEI3 AC121844.2-201ENSMUST00000219067 2066 ntBASIC0.71□□□□□ -2.3
Ccdc28aQ8CEI3 Mir701-201ENSMUST00000102208 109 ntBASIC0.71□□□□□ -2.3
Ccdc28aQ8CEI3 Gm15529-201ENSMUST00000121833 994 ntBASIC0.71□□□□□ -2.3
Ccdc28aQ8CEI3 Gm22841-201ENSMUST00000158443 62 ntBASIC0.71□□□□□ -2.3
Ccdc28aQ8CEI3 Gm24154-201ENSMUST00000175261 130 ntBASIC0.71□□□□□ -2.3
Ccdc28aQ8CEI3 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC0.71□□□□□ -2.3
Ccdc28aQ8CEI3 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC0.71□□□□□ -2.3
Ccdc28aQ8CEI3 Gm26335-201ENSMUST00000178449 107 ntBASIC0.71□□□□□ -2.3
Ccdc28aQ8CEI3 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC0.71□□□□□ -2.3
Ccdc28aQ8CEI3 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC0.71□□□□□ -2.3
Ccdc28aQ8CEI3 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.71□□□□□ -2.3
Ccdc28aQ8CEI3 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.71□□□□□ -2.3
Ccdc28aQ8CEI3 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.71□□□□□ -2.3
Ccdc28aQ8CEI3 Gm23379-201ENSMUST00000180026 107 ntBASIC0.71□□□□□ -2.3
Ccdc28aQ8CEI3 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC0.71□□□□□ -2.3
Ccdc28aQ8CEI3 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC0.71□□□□□ -2.3
Ccdc28aQ8CEI3 Gm8125-201ENSMUST00000216602 738 ntBASIC0.71□□□□□ -2.3
Ccdc28aQ8CEI3 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC0.71□□□□□ -2.3
Ccdc28aQ8CEI3 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC0.71□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms