Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm22551-201ENSMUST00000157795 103 ntBASIC2.07□□□□□ -2.08
Nup88Q8CEC0 Gm17919-201ENSMUST00000173344 312 ntBASIC2.07□□□□□ -2.08
Nup88Q8CEC0 Gm26435-201ENSMUST00000179026 107 ntBASIC2.07□□□□□ -2.08
Nup88Q8CEC0 Mir8116-201ENSMUST00000184134 97 ntBASIC2.07□□□□□ -2.08
Nup88Q8CEC0 Gm28418-201ENSMUST00000186179 423 ntBASIC2.07□□□□□ -2.08
Nup88Q8CEC0 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Nup88Q8CEC0 Gm43250-201ENSMUST00000196536 273 ntBASIC2.07□□□□□ -2.08
Nup88Q8CEC0 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC2.07□□□□□ -2.08
Nup88Q8CEC0 CT030687.1-201ENSMUST00000221854 162 ntBASIC2.07□□□□□ -2.08
Nup88Q8CEC0 AC116589.4-201ENSMUST00000222390 216 ntBASIC2.07□□□□□ -2.08
Nup88Q8CEC0 Gm22972-201ENSMUST00000083297 131 ntBASIC2.07□□□□□ -2.08
Nup88Q8CEC0 Mir151-201ENSMUST00000083678 68 ntBASIC2.07□□□□□ -2.08
Nup88Q8CEC0 Gm23851-201ENSMUST00000083831 103 ntBASIC2.07□□□□□ -2.08
Nup88Q8CEC0 Mir669d-2-201ENSMUST00000116854 86 ntBASIC2.06□□□□□ -2.08
Nup88Q8CEC0 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC2.06□□□□□ -2.08
Nup88Q8CEC0 Gm14298-201ENSMUST00000139032 237 ntBASIC2.06□□□□□ -2.08
Nup88Q8CEC0 Gm16356-201ENSMUST00000143300 169 ntBASIC2.06□□□□□ -2.08
Nup88Q8CEC0 Mir1936-201ENSMUST00000158699 93 ntBASIC2.06□□□□□ -2.08
Nup88Q8CEC0 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Nup88Q8CEC0 Gm25994-201ENSMUST00000175392 101 ntBASIC2.06□□□□□ -2.08
Nup88Q8CEC0 Gm22114-201ENSMUST00000177756 107 ntBASIC2.06□□□□□ -2.08
Nup88Q8CEC0 Gm37713-201ENSMUST00000191746 198 ntBASIC2.06□□□□□ -2.08
Nup88Q8CEC0 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Nup88Q8CEC0 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
Nup88Q8CEC0 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Nup88Q8CEC0 Mir340-201ENSMUST00000083483 98 ntBASIC2.06□□□□□ -2.08
Nup88Q8CEC0 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Nup88Q8CEC0 Mir301b-201ENSMUST00000102333 97 ntBASIC2.05□□□□□ -2.08
Nup88Q8CEC0 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Nup88Q8CEC0 Gm13339-201ENSMUST00000120651 510 ntBASIC2.05□□□□□ -2.08
Nup88Q8CEC0 Gm24630-201ENSMUST00000122768 106 ntBASIC2.05□□□□□ -2.08
Nup88Q8CEC0 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Nup88Q8CEC0 Gm15692-201ENSMUST00000152173 352 ntBASIC2.05□□□□□ -2.08
Nup88Q8CEC0 Gm23262-201ENSMUST00000158323 168 ntBASIC2.05□□□□□ -2.08
Nup88Q8CEC0 Gm23090-201ENSMUST00000177331 78 ntBASIC2.05□□□□□ -2.08
Nup88Q8CEC0 Gm25450-201ENSMUST00000179144 107 ntBASIC2.05□□□□□ -2.08
Nup88Q8CEC0 Gm36891-201ENSMUST00000191995 655 ntBASIC2.05□□□□□ -2.08
Nup88Q8CEC0 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.05□□□□□ -2.08
Nup88Q8CEC0 AC173345.2-201ENSMUST00000222795 153 ntBASIC2.05□□□□□ -2.08
Nup88Q8CEC0 AC183092.1-201ENSMUST00000224301 153 ntBASIC2.05□□□□□ -2.08
Nup88Q8CEC0 Mir301-201ENSMUST00000083655 86 ntBASIC2.05□□□□□ -2.08
Nup88Q8CEC0 Gm23015-201ENSMUST00000104145 128 ntBASIC2.04□□□□□ -2.08
Nup88Q8CEC0 Gm11854-201ENSMUST00000117839 446 ntBASIC2.04□□□□□ -2.08
Nup88Q8CEC0 Mir1949-201ENSMUST00000157434 141 ntBASIC2.04□□□□□ -2.08
Nup88Q8CEC0 Gm25371-201ENSMUST00000158162 101 ntBASIC2.04□□□□□ -2.08
Nup88Q8CEC0 Mir3086-201ENSMUST00000175072 87 ntBASIC2.04□□□□□ -2.08
Nup88Q8CEC0 Gm24572-201ENSMUST00000175505 88 ntBASIC2.04□□□□□ -2.08
Nup88Q8CEC0 Gm24390-201ENSMUST00000179578 62 ntBASIC2.04□□□□□ -2.08
Nup88Q8CEC0 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC2.04□□□□□ -2.08
Nup88Q8CEC0 Gm7240-201ENSMUST00000220769 664 ntBASIC2.04□□□□□ -2.08
Nup88Q8CEC0 Mir107-201ENSMUST00000083660 87 ntBASIC2.04□□□□□ -2.08
Nup88Q8CEC0 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Nup88Q8CEC0 AC164629.4-201ENSMUST00000218505 3247 ntBASIC2.04□□□□□ -2.08
Nup88Q8CEC0 Gm15102-201ENSMUST00000118740 1502 ntBASIC2.03□□□□□ -2.08
Nup88Q8CEC0 Gm15101-201ENSMUST00000178818 1502 ntBASIC2.03□□□□□ -2.08
Nup88Q8CEC0 Gm33962-201ENSMUST00000182643 2592 ntBASIC2.03□□□□□ -2.08
Nup88Q8CEC0 Gm24079-201ENSMUST00000104352 132 ntBASIC2.03□□□□□ -2.08
Nup88Q8CEC0 Gm11786-201ENSMUST00000120799 155 ntBASIC2.03□□□□□ -2.08
Nup88Q8CEC0 Gm23474-201ENSMUST00000158884 75 ntBASIC2.03□□□□□ -2.08
Nup88Q8CEC0 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.03□□□□□ -2.08
Nup88Q8CEC0 Mir5624-201ENSMUST00000176635 61 ntBASIC2.03□□□□□ -2.08
Nup88Q8CEC0 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC2.03□□□□□ -2.08
Nup88Q8CEC0 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC2.03□□□□□ -2.08
Nup88Q8CEC0 Mir6951-201ENSMUST00000183910 75 ntBASIC2.03□□□□□ -2.08
Nup88Q8CEC0 Gm28008-201ENSMUST00000184021 186 ntBASIC2.03□□□□□ -2.08
Nup88Q8CEC0 Gm34015-201ENSMUST00000194908 451 ntBASIC2.03□□□□□ -2.08
Nup88Q8CEC0 Gm20144-201ENSMUST00000203031 165 ntBASIC2.03□□□□□ -2.08
Nup88Q8CEC0 Gm23625-201ENSMUST00000082457 100 ntBASIC2.03□□□□□ -2.08
Nup88Q8CEC0 Gm25930-201ENSMUST00000082785 107 ntBASIC2.03□□□□□ -2.08
Nup88Q8CEC0 Mir410-201ENSMUST00000083563 81 ntBASIC2.03□□□□□ -2.08
Nup88Q8CEC0 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Nup88Q8CEC0 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
Nup88Q8CEC0 Mir374b-201ENSMUST00000102314 95 ntBASIC2.02□□□□□ -2.09
Nup88Q8CEC0 Gm12647-201ENSMUST00000118977 265 ntBASIC2.02□□□□□ -2.09
Nup88Q8CEC0 Gm25658-201ENSMUST00000158472 128 ntBASIC2.02□□□□□ -2.09
Nup88Q8CEC0 Gm27271-201ENSMUST00000183509 170 ntBASIC2.02□□□□□ -2.09
Nup88Q8CEC0 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC2.02□□□□□ -2.09
Nup88Q8CEC0 Gm25512-201ENSMUST00000083863 107 ntBASIC2.02□□□□□ -2.09
Nup88Q8CEC0 Snora33-201ENSMUST00000093556 129 ntBASIC2.02□□□□□ -2.09
Nup88Q8CEC0 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Nup88Q8CEC0 Gm22761-201ENSMUST00000102278 96 ntBASIC2.01□□□□□ -2.09
Nup88Q8CEC0 Gm25832-201ENSMUST00000104140 130 ntBASIC2.01□□□□□ -2.09
Nup88Q8CEC0 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC2.01□□□□□ -2.09
Nup88Q8CEC0 Gm22281-201ENSMUST00000157198 103 ntBASIC2.01□□□□□ -2.09
Nup88Q8CEC0 Gm22434-201ENSMUST00000158549 122 ntBASIC2.01□□□□□ -2.09
Nup88Q8CEC0 Gm23355-201ENSMUST00000177614 107 ntBASIC2.01□□□□□ -2.09
Nup88Q8CEC0 Gm23148-201ENSMUST00000180367 107 ntBASIC2.01□□□□□ -2.09
Nup88Q8CEC0 Gm26914-201ENSMUST00000182262 223 ntBASIC2.01□□□□□ -2.09
Nup88Q8CEC0 Gm27640-201ENSMUST00000184580 147 ntBASIC2.01□□□□□ -2.09
Nup88Q8CEC0 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC2.01□□□□□ -2.09
Nup88Q8CEC0 Gm42834-201ENSMUST00000196845 256 ntBASIC2.01□□□□□ -2.09
Nup88Q8CEC0 Gm44473-201ENSMUST00000204039 152 ntBASIC2.01□□□□□ -2.09
Nup88Q8CEC0 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC2.01□□□□□ -2.09
Nup88Q8CEC0 AC166341.3-201ENSMUST00000221861 114 ntBASIC2.01□□□□□ -2.09
Nup88Q8CEC0 AC173482.4-201ENSMUST00000225096 348 ntBASIC2.01□□□□□ -2.09
Nup88Q8CEC0 Gm25078-201ENSMUST00000082530 107 ntBASIC2.01□□□□□ -2.09
Nup88Q8CEC0 Gm25258-201ENSMUST00000083049 107 ntBASIC2.01□□□□□ -2.09
Nup88Q8CEC0 Gm25789-201ENSMUST00000083294 76 ntBASIC2.01□□□□□ -2.09
Nup88Q8CEC0 Mir429-201ENSMUST00000083493 83 ntBASIC2.01□□□□□ -2.09
Nup88Q8CEC0 Gm24163-201ENSMUST00000093660 132 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 131.4 ms