Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm23813-201ENSMUST00000175153 77 ntBASIC2.19□□□□□ -2.06
Atg4aQ8C9S8 Mir7679-201ENSMUST00000183379 63 ntBASIC2.19□□□□□ -2.06
Atg4aQ8C9S8 Mir7678-201ENSMUST00000185076 71 ntBASIC2.19□□□□□ -2.06
Atg4aQ8C9S8 Gm27959-201ENSMUST00000185172 111 ntBASIC2.19□□□□□ -2.06
Atg4aQ8C9S8 Gm28849-201ENSMUST00000188127 174 ntBASIC2.19□□□□□ -2.06
Atg4aQ8C9S8 Gm28330-201ENSMUST00000190353 171 ntBASIC2.19□□□□□ -2.06
Atg4aQ8C9S8 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.19□□□□□ -2.06
Atg4aQ8C9S8 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.19□□□□□ -2.06
Atg4aQ8C9S8 AL606472.1-201ENSMUST00000224628 275 ntBASIC2.19□□□□□ -2.06
Atg4aQ8C9S8 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.19□□□□□ -2.06
Atg4aQ8C9S8 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Atg4aQ8C9S8 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.19□□□□□ -2.06
Atg4aQ8C9S8 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.19□□□□□ -2.06
Atg4aQ8C9S8 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.18□□□□□ -2.06
Atg4aQ8C9S8 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.18□□□□□ -2.06
Atg4aQ8C9S8 Gm12351-201ENSMUST00000118727 292 ntBASIC2.18□□□□□ -2.06
Atg4aQ8C9S8 Gm12926-201ENSMUST00000121158 409 ntBASIC2.18□□□□□ -2.06
Atg4aQ8C9S8 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC2.18□□□□□ -2.06
Atg4aQ8C9S8 Gm23381-201ENSMUST00000157676 94 ntBASIC2.18□□□□□ -2.06
Atg4aQ8C9S8 Gm17067-202ENSMUST00000180131 123 ntBASIC2.18□□□□□ -2.06
Atg4aQ8C9S8 Gm27991-201ENSMUST00000184804 137 ntBASIC2.18□□□□□ -2.06
Atg4aQ8C9S8 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC2.18□□□□□ -2.06
Atg4aQ8C9S8 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.18□□□□□ -2.06
Atg4aQ8C9S8 Gm45150-201ENSMUST00000206051 467 ntBASIC2.18□□□□□ -2.06
Atg4aQ8C9S8 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC2.18□□□□□ -2.06
Atg4aQ8C9S8 AC239878.2-201ENSMUST00000224048 464 ntBASIC2.18□□□□□ -2.06
Atg4aQ8C9S8 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Atg4aQ8C9S8 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.18□□□□□ -2.06
Atg4aQ8C9S8 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.17□□□□□ -2.06
Atg4aQ8C9S8 Mir758-201ENSMUST00000103260 81 ntBASIC2.17□□□□□ -2.06
Atg4aQ8C9S8 Gm24116-201ENSMUST00000103975 107 ntBASIC2.17□□□□□ -2.06
Atg4aQ8C9S8 Gm11936-201ENSMUST00000118323 160 ntBASIC2.17□□□□□ -2.06
Atg4aQ8C9S8 Gm26479-201ENSMUST00000122620 106 ntBASIC2.17□□□□□ -2.06
Atg4aQ8C9S8 Gm25392-201ENSMUST00000157335 297 ntBASIC2.17□□□□□ -2.06
Atg4aQ8C9S8 Gm25059-201ENSMUST00000157367 117 ntBASIC2.17□□□□□ -2.06
Atg4aQ8C9S8 Gm22215-201ENSMUST00000157558 96 ntBASIC2.17□□□□□ -2.06
Atg4aQ8C9S8 Gm22315-201ENSMUST00000158010 143 ntBASIC2.17□□□□□ -2.06
Atg4aQ8C9S8 Snord11-201ENSMUST00000158468 84 ntBASIC2.17□□□□□ -2.06
Atg4aQ8C9S8 Gm25718-201ENSMUST00000158632 118 ntBASIC2.17□□□□□ -2.06
Atg4aQ8C9S8 Gm25643-201ENSMUST00000158874 103 ntBASIC2.17□□□□□ -2.06
Atg4aQ8C9S8 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Atg4aQ8C9S8 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC2.17□□□□□ -2.06
Atg4aQ8C9S8 Gm19901-201ENSMUST00000192191 495 ntBASIC2.17□□□□□ -2.06
Atg4aQ8C9S8 Gm26265-202ENSMUST00000196326 133 ntBASIC2.17□□□□□ -2.06
Atg4aQ8C9S8 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.17□□□□□ -2.06
Atg4aQ8C9S8 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.16□□□□□ -2.06
Atg4aQ8C9S8 Gm23013-201ENSMUST00000104146 106 ntBASIC2.16□□□□□ -2.06
Atg4aQ8C9S8 Gm25875-201ENSMUST00000104323 107 ntBASIC2.16□□□□□ -2.06
Atg4aQ8C9S8 n-R5s67-201ENSMUST00000104336 114 ntBASIC2.16□□□□□ -2.06
Atg4aQ8C9S8 Gm22494-201ENSMUST00000104495 128 ntBASIC2.16□□□□□ -2.06
Atg4aQ8C9S8 Mir669d-201ENSMUST00000104644 121 ntBASIC2.16□□□□□ -2.06
Atg4aQ8C9S8 Gm22195-201ENSMUST00000116861 108 ntBASIC2.16□□□□□ -2.06
Atg4aQ8C9S8 Gm6829-201ENSMUST00000119858 360 ntBASIC2.16□□□□□ -2.06
Atg4aQ8C9S8 Gm24480-201ENSMUST00000157442 103 ntBASIC2.16□□□□□ -2.06
Atg4aQ8C9S8 Gm24770-201ENSMUST00000158505 92 ntBASIC2.16□□□□□ -2.06
Atg4aQ8C9S8 Gm26024-201ENSMUST00000158657 322 ntBASIC2.16□□□□□ -2.06
Atg4aQ8C9S8 Gm25933-201ENSMUST00000178943 108 ntBASIC2.16□□□□□ -2.06
Atg4aQ8C9S8 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC2.16□□□□□ -2.06
Atg4aQ8C9S8 Gm28169-201ENSMUST00000190342 345 ntBASIC2.16□□□□□ -2.06
Atg4aQ8C9S8 Mir30d-201ENSMUST00000083503 82 ntBASIC2.16□□□□□ -2.06
Atg4aQ8C9S8 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Atg4aQ8C9S8 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.06
Atg4aQ8C9S8 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
Atg4aQ8C9S8 Gm13885-201ENSMUST00000117569 187 ntBASIC2.15□□□□□ -2.07
Atg4aQ8C9S8 Gm11786-201ENSMUST00000120799 155 ntBASIC2.15□□□□□ -2.07
Atg4aQ8C9S8 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.15□□□□□ -2.07
Atg4aQ8C9S8 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC2.15□□□□□ -2.07
Atg4aQ8C9S8 Gm2830-201ENSMUST00000140330 385 ntBASIC2.15□□□□□ -2.07
Atg4aQ8C9S8 Gm25888-201ENSMUST00000157778 302 ntBASIC2.15□□□□□ -2.07
Atg4aQ8C9S8 Gm22537-201ENSMUST00000158172 199 ntBASIC2.15□□□□□ -2.07
Atg4aQ8C9S8 Gm25051-201ENSMUST00000158602 249 ntBASIC2.15□□□□□ -2.07
Atg4aQ8C9S8 Gm27540-201ENSMUST00000184950 187 ntBASIC2.15□□□□□ -2.07
Atg4aQ8C9S8 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC2.15□□□□□ -2.07
Atg4aQ8C9S8 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Atg4aQ8C9S8 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC2.15□□□□□ -2.07
Atg4aQ8C9S8 Gm19118-201ENSMUST00000222554 98 ntBASIC2.15□□□□□ -2.07
Atg4aQ8C9S8 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.15□□□□□ -2.07
Atg4aQ8C9S8 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.15□□□□□ -2.07
Atg4aQ8C9S8 AC173482.4-201ENSMUST00000225096 348 ntBASIC2.15□□□□□ -2.07
Atg4aQ8C9S8 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.14□□□□□ -2.07
Atg4aQ8C9S8 Gm25184-201ENSMUST00000157753 163 ntBASIC2.14□□□□□ -2.07
Atg4aQ8C9S8 Gm24573-201ENSMUST00000175499 112 ntBASIC2.14□□□□□ -2.07
Atg4aQ8C9S8 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC2.14□□□□□ -2.07
Atg4aQ8C9S8 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.14□□□□□ -2.07
Atg4aQ8C9S8 Gm29140-201ENSMUST00000190187 476 ntBASIC2.14□□□□□ -2.07
Atg4aQ8C9S8 Gm37778-201ENSMUST00000191732 190 ntBASIC2.14□□□□□ -2.07
Atg4aQ8C9S8 Mir7021-201ENSMUST00000197026 63 ntBASIC2.14□□□□□ -2.07
Atg4aQ8C9S8 Gm20144-201ENSMUST00000203031 165 ntBASIC2.14□□□□□ -2.07
Atg4aQ8C9S8 AC125374.2-201ENSMUST00000214278 162 ntBASIC2.14□□□□□ -2.07
Atg4aQ8C9S8 AC167140.1-201ENSMUST00000224710 403 ntBASIC2.14□□□□□ -2.07
Atg4aQ8C9S8 AC115735.2-201ENSMUST00000227135 351 ntBASIC2.14□□□□□ -2.07
Atg4aQ8C9S8 Gm25930-201ENSMUST00000082785 107 ntBASIC2.14□□□□□ -2.07
Atg4aQ8C9S8 Gm24044-201ENSMUST00000083107 156 ntBASIC2.14□□□□□ -2.07
Atg4aQ8C9S8 Gm26126-201ENSMUST00000083188 164 ntBASIC2.14□□□□□ -2.07
Atg4aQ8C9S8 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Atg4aQ8C9S8 Gm42536-201ENSMUST00000197562 1613 ntBASIC2.13□□□□□ -2.07
Atg4aQ8C9S8 Gm25279-201ENSMUST00000122608 133 ntBASIC2.13□□□□□ -2.07
Atg4aQ8C9S8 Gm22027-201ENSMUST00000122737 127 ntBASIC2.13□□□□□ -2.07
Atg4aQ8C9S8 Gm22984-201ENSMUST00000122751 122 ntBASIC2.13□□□□□ -2.07
Atg4aQ8C9S8 Gm23043-201ENSMUST00000157890 109 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms