Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm26074-201ENSMUST00000104063 129 ntBASIC0.73□□□□□ -2.29
Trub1Q8C0D0 Gm24962-201ENSMUST00000157917 109 ntBASIC0.73□□□□□ -2.29
Trub1Q8C0D0 Mir1936-201ENSMUST00000158699 93 ntBASIC0.73□□□□□ -2.29
Trub1Q8C0D0 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.73□□□□□ -2.29
Trub1Q8C0D0 Gm8151-201ENSMUST00000184817 871 ntBASIC0.73□□□□□ -2.29
Trub1Q8C0D0 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC0.73□□□□□ -2.29
Trub1Q8C0D0 Gm38395-201ENSMUST00000199904 830 ntBASIC0.73□□□□□ -2.29
Trub1Q8C0D0 Gm45658-201ENSMUST00000209197 580 ntBASIC0.73□□□□□ -2.29
Trub1Q8C0D0 Gm45315-201ENSMUST00000209283 333 ntBASIC0.73□□□□□ -2.29
Trub1Q8C0D0 Gm35558-203ENSMUST00000222264 204 ntBASIC0.73□□□□□ -2.29
Trub1Q8C0D0 AC163295.1-201ENSMUST00000227840 314 ntBASIC0.73□□□□□ -2.29
Trub1Q8C0D0 Gm12080-201ENSMUST00000119821 1883 ntBASIC0.73□□□□□ -2.29
Trub1Q8C0D0 Gm42755-201ENSMUST00000198533 1493 ntBASIC0.73□□□□□ -2.29
Trub1Q8C0D0 Gm11862-201ENSMUST00000119678 659 ntBASIC0.72□□□□□ -2.29
Trub1Q8C0D0 Gm11358-201ENSMUST00000122310 373 ntBASIC0.72□□□□□ -2.29
Trub1Q8C0D0 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.72□□□□□ -2.29
Trub1Q8C0D0 Gm22233-201ENSMUST00000157464 114 ntBASIC0.72□□□□□ -2.29
Trub1Q8C0D0 Gm25868-201ENSMUST00000158253 114 ntBASIC0.72□□□□□ -2.29
Trub1Q8C0D0 Gm24221-201ENSMUST00000158833 313 ntBASIC0.72□□□□□ -2.29
Trub1Q8C0D0 Gm24315-201ENSMUST00000177835 127 ntBASIC0.72□□□□□ -2.29
Trub1Q8C0D0 Trbv22-201ENSMUST00000191697 291 ntBASIC0.72□□□□□ -2.29
Trub1Q8C0D0 Gm19855-201ENSMUST00000210145 249 ntBASIC0.72□□□□□ -2.29
Trub1Q8C0D0 Gm18696-201ENSMUST00000220103 274 ntBASIC0.72□□□□□ -2.29
Trub1Q8C0D0 Gm20102-201ENSMUST00000222445 220 ntBASIC0.72□□□□□ -2.29
Trub1Q8C0D0 Gm26224-201ENSMUST00000082506 80 ntBASIC0.72□□□□□ -2.29
Trub1Q8C0D0 Snord35a-201ENSMUST00000083884 90 ntBASIC0.72□□□□□ -2.29
Trub1Q8C0D0 Gm26314-201ENSMUST00000083891 107 ntBASIC0.72□□□□□ -2.29
Trub1Q8C0D0 Gm14917-201ENSMUST00000118872 2105 ntBASIC0.71□□□□□ -2.3
Trub1Q8C0D0 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC0.71□□□□□ -2.3
Trub1Q8C0D0 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC0.71□□□□□ -2.3
Trub1Q8C0D0 Gm13059-201ENSMUST00000119881 398 ntBASIC0.71□□□□□ -2.3
Trub1Q8C0D0 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
Trub1Q8C0D0 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
Trub1Q8C0D0 Mir3109-201ENSMUST00000175301 88 ntBASIC0.71□□□□□ -2.3
Trub1Q8C0D0 Gm26652-202ENSMUST00000181672 475 ntBASIC0.71□□□□□ -2.3
Trub1Q8C0D0 Gm28848-201ENSMUST00000189984 168 ntBASIC0.71□□□□□ -2.3
Trub1Q8C0D0 Gm42533-201ENSMUST00000196247 157 ntBASIC0.71□□□□□ -2.3
Trub1Q8C0D0 AC134334.1-201ENSMUST00000214277 255 ntBASIC0.71□□□□□ -2.3
Trub1Q8C0D0 AC164297.3-201ENSMUST00000224238 94 ntBASIC0.71□□□□□ -2.3
Trub1Q8C0D0 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
Trub1Q8C0D0 Gm23731-201ENSMUST00000083749 107 ntBASIC0.71□□□□□ -2.3
Trub1Q8C0D0 Gm37642-201ENSMUST00000193166 1735 ntBASIC0.7□□□□□ -2.3
Trub1Q8C0D0 AC102369.2-201ENSMUST00000219725 1679 ntBASIC0.7□□□□□ -2.3
Trub1Q8C0D0 Gm23411-201ENSMUST00000157988 62 ntBASIC0.7□□□□□ -2.3
Trub1Q8C0D0 Mir5104-201ENSMUST00000175319 94 ntBASIC0.7□□□□□ -2.3
Trub1Q8C0D0 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
Trub1Q8C0D0 Gm25253-201ENSMUST00000179958 107 ntBASIC0.7□□□□□ -2.3
Trub1Q8C0D0 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
Trub1Q8C0D0 Gm27271-201ENSMUST00000183509 170 ntBASIC0.7□□□□□ -2.3
Trub1Q8C0D0 Gm27817-201ENSMUST00000184302 233 ntBASIC0.7□□□□□ -2.3
Trub1Q8C0D0 Gm28257-201ENSMUST00000185244 463 ntBASIC0.7□□□□□ -2.3
Trub1Q8C0D0 Gm42855-201ENSMUST00000197388 253 ntBASIC0.7□□□□□ -2.3
Trub1Q8C0D0 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
Trub1Q8C0D0 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.69□□□□□ -2.3
Trub1Q8C0D0 Gm14803-201ENSMUST00000117163 361 ntBASIC0.69□□□□□ -2.3
Trub1Q8C0D0 Gm11572-201ENSMUST00000119164 120 ntBASIC0.69□□□□□ -2.3
Trub1Q8C0D0 Gm11512-201ENSMUST00000119669 663 ntBASIC0.69□□□□□ -2.3
Trub1Q8C0D0 Gm23557-201ENSMUST00000157820 138 ntBASIC0.69□□□□□ -2.3
Trub1Q8C0D0 Gm22403-201ENSMUST00000174919 84 ntBASIC0.69□□□□□ -2.3
Trub1Q8C0D0 Gm25121-201ENSMUST00000179846 79 ntBASIC0.69□□□□□ -2.3
Trub1Q8C0D0 Gm28414-201ENSMUST00000190111 294 ntBASIC0.69□□□□□ -2.3
Trub1Q8C0D0 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
Trub1Q8C0D0 Gm26301-201ENSMUST00000104813 95 ntBASIC0.68□□□□□ -2.3
Trub1Q8C0D0 Mir293-201ENSMUST00000104841 80 ntBASIC0.68□□□□□ -2.3
Trub1Q8C0D0 Gm13967-201ENSMUST00000120404 380 ntBASIC0.68□□□□□ -2.3
Trub1Q8C0D0 Gm22477-201ENSMUST00000122569 316 ntBASIC0.68□□□□□ -2.3
Trub1Q8C0D0 Gm25663-201ENSMUST00000157698 135 ntBASIC0.68□□□□□ -2.3
Trub1Q8C0D0 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.68□□□□□ -2.3
Trub1Q8C0D0 Mir1954-201ENSMUST00000175595 86 ntBASIC0.68□□□□□ -2.3
Trub1Q8C0D0 Gm37399-201ENSMUST00000195224 416 ntBASIC0.68□□□□□ -2.3
Trub1Q8C0D0 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC0.68□□□□□ -2.3
Trub1Q8C0D0 Gm44282-201ENSMUST00000203199 190 ntBASIC0.68□□□□□ -2.3
Trub1Q8C0D0 AL772265.1-201ENSMUST00000214379 305 ntBASIC0.68□□□□□ -2.3
Trub1Q8C0D0 Gm45815-201ENSMUST00000220241 146 ntBASIC0.68□□□□□ -2.3
Trub1Q8C0D0 Gm22306-201ENSMUST00000082692 107 ntBASIC0.68□□□□□ -2.3
Trub1Q8C0D0 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
Trub1Q8C0D0 AC133079.1-201ENSMUST00000220943 1881 ntBASIC0.67□□□□□ -2.3
Trub1Q8C0D0 Gm44177-201ENSMUST00000204338 2667 ntBASIC0.67□□□□□ -2.3
Trub1Q8C0D0 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
Trub1Q8C0D0 Gm23836-201ENSMUST00000104434 129 ntBASIC0.67□□□□□ -2.3
Trub1Q8C0D0 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC0.67□□□□□ -2.3
Trub1Q8C0D0 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC0.67□□□□□ -2.3
Trub1Q8C0D0 Gm23106-201ENSMUST00000157554 101 ntBASIC0.67□□□□□ -2.3
Trub1Q8C0D0 Gm43250-201ENSMUST00000196536 273 ntBASIC0.67□□□□□ -2.3
Trub1Q8C0D0 AC192333.2-201ENSMUST00000224771 196 ntBASIC0.67□□□□□ -2.3
Trub1Q8C0D0 Gm26066-201ENSMUST00000083385 109 ntBASIC0.67□□□□□ -2.3
Trub1Q8C0D0 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC0.67□□□□□ -2.3
Trub1Q8C0D0 Gm12584-201ENSMUST00000117109 1105 ntBASIC0.66□□□□□ -2.3
Trub1Q8C0D0 Gm3027-201ENSMUST00000167579 451 ntBASIC0.66□□□□□ -2.3
Trub1Q8C0D0 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC0.66□□□□□ -2.3
Trub1Q8C0D0 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC0.66□□□□□ -2.3
Trub1Q8C0D0 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC0.66□□□□□ -2.3
Trub1Q8C0D0 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC0.66□□□□□ -2.3
Trub1Q8C0D0 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.66□□□□□ -2.3
Trub1Q8C0D0 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.66□□□□□ -2.3
Trub1Q8C0D0 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.66□□□□□ -2.3
Trub1Q8C0D0 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC0.66□□□□□ -2.3
Trub1Q8C0D0 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC0.66□□□□□ -2.3
Trub1Q8C0D0 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC0.66□□□□□ -2.3
Trub1Q8C0D0 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 152.3 ms