Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm27921-201ENSMUST00000183968 108 ntBASIC2.57□□□□□ -2
Sh3rf2Q8BZT2 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC2.57□□□□□ -2
Sh3rf2Q8BZT2 Mir721-201ENSMUST00000200230 88 ntBASIC2.57□□□□□ -2
Sh3rf2Q8BZT2 Gm44429-201ENSMUST00000203542 186 ntBASIC2.57□□□□□ -2
Sh3rf2Q8BZT2 AC124182.1-201ENSMUST00000227091 321 ntBASIC2.57□□□□□ -2
Sh3rf2Q8BZT2 AC122834.1-201ENSMUST00000227182 425 ntBASIC2.57□□□□□ -2
Sh3rf2Q8BZT2 Gm22978-201ENSMUST00000082607 160 ntBASIC2.57□□□□□ -2
Sh3rf2Q8BZT2 Gm22443-201ENSMUST00000082890 107 ntBASIC2.57□□□□□ -2
Sh3rf2Q8BZT2 Mir127-201ENSMUST00000093568 70 ntBASIC2.57□□□□□ -2
Sh3rf2Q8BZT2 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Sh3rf2Q8BZT2 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.56□□□□□ -2
Sh3rf2Q8BZT2 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.56□□□□□ -2
Sh3rf2Q8BZT2 Gm25716-201ENSMUST00000158628 104 ntBASIC2.56□□□□□ -2
Sh3rf2Q8BZT2 Gm4468-201ENSMUST00000170206 294 ntBASIC2.56□□□□□ -2
Sh3rf2Q8BZT2 Gm21827-201ENSMUST00000178247 423 ntBASIC2.56□□□□□ -2
Sh3rf2Q8BZT2 Gm29597-201ENSMUST00000188035 308 ntBASIC2.56□□□□□ -2
Sh3rf2Q8BZT2 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC2.56□□□□□ -2
Sh3rf2Q8BZT2 CU062626.2-201ENSMUST00000223953 274 ntBASIC2.56□□□□□ -2
Sh3rf2Q8BZT2 AC167669.4-201ENSMUST00000225967 140 ntBASIC2.56□□□□□ -2
Sh3rf2Q8BZT2 AC151902.2-201ENSMUST00000226419 301 ntBASIC2.56□□□□□ -2
Sh3rf2Q8BZT2 Mir103-2-201ENSMUST00000083629 86 ntBASIC2.56□□□□□ -2
Sh3rf2Q8BZT2 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
Sh3rf2Q8BZT2 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Sh3rf2Q8BZT2 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Sh3rf2Q8BZT2 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Sh3rf2Q8BZT2 Gm25945-201ENSMUST00000122484 135 ntBASIC2.55□□□□□ -2
Sh3rf2Q8BZT2 Gm25985-201ENSMUST00000122677 107 ntBASIC2.55□□□□□ -2
Sh3rf2Q8BZT2 Gm23889-201ENSMUST00000122689 104 ntBASIC2.55□□□□□ -2
Sh3rf2Q8BZT2 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC2.55□□□□□ -2
Sh3rf2Q8BZT2 Gm23642-201ENSMUST00000157858 258 ntBASIC2.55□□□□□ -2
Sh3rf2Q8BZT2 Gm22606-201ENSMUST00000158290 103 ntBASIC2.55□□□□□ -2
Sh3rf2Q8BZT2 Gm25935-201ENSMUST00000178746 107 ntBASIC2.55□□□□□ -2
Sh3rf2Q8BZT2 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.55□□□□□ -2
Sh3rf2Q8BZT2 Mir6399-201ENSMUST00000184050 84 ntBASIC2.55□□□□□ -2
Sh3rf2Q8BZT2 Gm27753-201ENSMUST00000184742 203 ntBASIC2.55□□□□□ -2
Sh3rf2Q8BZT2 Snord80-202ENSMUST00000199023 77 ntBASIC2.55□□□□□ -2
Sh3rf2Q8BZT2 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.55□□□□□ -2
Sh3rf2Q8BZT2 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.55□□□□□ -2
Sh3rf2Q8BZT2 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Sh3rf2Q8BZT2 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
Sh3rf2Q8BZT2 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Sh3rf2Q8BZT2 Gm22752-201ENSMUST00000102083 109 ntBASIC2.54□□□□□ -2
Sh3rf2Q8BZT2 Gm26249-201ENSMUST00000116708 118 ntBASIC2.54□□□□□ -2
Sh3rf2Q8BZT2 Gm23559-201ENSMUST00000157824 103 ntBASIC2.54□□□□□ -2
Sh3rf2Q8BZT2 Gm22384-201ENSMUST00000158187 104 ntBASIC2.54□□□□□ -2
Sh3rf2Q8BZT2 Gm25866-201ENSMUST00000158245 112 ntBASIC2.54□□□□□ -2
Sh3rf2Q8BZT2 Gm22416-201ENSMUST00000158590 88 ntBASIC2.54□□□□□ -2
Sh3rf2Q8BZT2 Gm25119-201ENSMUST00000158815 88 ntBASIC2.54□□□□□ -2
Sh3rf2Q8BZT2 Mir5118-201ENSMUST00000175551 67 ntBASIC2.54□□□□□ -2
Sh3rf2Q8BZT2 Mir7050-201ENSMUST00000184636 60 ntBASIC2.54□□□□□ -2
Sh3rf2Q8BZT2 Gm37281-201ENSMUST00000192412 439 ntBASIC2.54□□□□□ -2
Sh3rf2Q8BZT2 Gm45013-201ENSMUST00000206883 178 ntBASIC2.54□□□□□ -2
Sh3rf2Q8BZT2 Snora19-201ENSMUST00000082962 132 ntBASIC2.54□□□□□ -2
Sh3rf2Q8BZT2 Gm23658-201ENSMUST00000083233 132 ntBASIC2.54□□□□□ -2
Sh3rf2Q8BZT2 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Sh3rf2Q8BZT2 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Sh3rf2Q8BZT2 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Sh3rf2Q8BZT2 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Sh3rf2Q8BZT2 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.53□□□□□ -2
Sh3rf2Q8BZT2 Gm24582-201ENSMUST00000103967 103 ntBASIC2.53□□□□□ -2
Sh3rf2Q8BZT2 Gm26342-201ENSMUST00000104557 129 ntBASIC2.53□□□□□ -2
Sh3rf2Q8BZT2 Gm26099-201ENSMUST00000157248 109 ntBASIC2.53□□□□□ -2
Sh3rf2Q8BZT2 Gm22192-201ENSMUST00000175128 85 ntBASIC2.53□□□□□ -2
Sh3rf2Q8BZT2 Mir6386-201ENSMUST00000183558 104 ntBASIC2.53□□□□□ -2
Sh3rf2Q8BZT2 Gm27369-201ENSMUST00000185182 71 ntBASIC2.53□□□□□ -2
Sh3rf2Q8BZT2 Gm44352-201ENSMUST00000196358 110 ntBASIC2.53□□□□□ -2
Sh3rf2Q8BZT2 Gm42739-201ENSMUST00000200687 226 ntBASIC2.53□□□□□ -2
Sh3rf2Q8BZT2 AC122242.1-201ENSMUST00000224650 304 ntBASIC2.53□□□□□ -2
Sh3rf2Q8BZT2 AC123709.1-201ENSMUST00000224848 345 ntBASIC2.53□□□□□ -2
Sh3rf2Q8BZT2 Gm25632-201ENSMUST00000083112 85 ntBASIC2.53□□□□□ -2
Sh3rf2Q8BZT2 Gm23847-201ENSMUST00000083829 110 ntBASIC2.53□□□□□ -2
Sh3rf2Q8BZT2 Gm26015-201ENSMUST00000104402 125 ntBASIC2.52□□□□□ -2.01
Sh3rf2Q8BZT2 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Sh3rf2Q8BZT2 Gm13756-201ENSMUST00000117618 222 ntBASIC2.52□□□□□ -2.01
Sh3rf2Q8BZT2 Gm13797-201ENSMUST00000121792 120 ntBASIC2.52□□□□□ -2.01
Sh3rf2Q8BZT2 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.52□□□□□ -2.01
Sh3rf2Q8BZT2 Gm27396-201ENSMUST00000157708 58 ntBASIC2.52□□□□□ -2.01
Sh3rf2Q8BZT2 Gm24601-201ENSMUST00000157970 143 ntBASIC2.52□□□□□ -2.01
Sh3rf2Q8BZT2 Gm24053-201ENSMUST00000158620 105 ntBASIC2.52□□□□□ -2.01
Sh3rf2Q8BZT2 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Sh3rf2Q8BZT2 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.52□□□□□ -2.01
Sh3rf2Q8BZT2 Gm43991-201ENSMUST00000203751 274 ntBASIC2.52□□□□□ -2.01
Sh3rf2Q8BZT2 AC132615.1-201ENSMUST00000213873 255 ntBASIC2.52□□□□□ -2.01
Sh3rf2Q8BZT2 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.52□□□□□ -2.01
Sh3rf2Q8BZT2 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.52□□□□□ -2.01
Sh3rf2Q8BZT2 AL627387.1-201ENSMUST00000226063 250 ntBASIC2.52□□□□□ -2.01
Sh3rf2Q8BZT2 Gm6030-201ENSMUST00000078768 402 ntBASIC2.52□□□□□ -2.01
Sh3rf2Q8BZT2 Gm22297-201ENSMUST00000083312 106 ntBASIC2.52□□□□□ -2.01
Sh3rf2Q8BZT2 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.52□□□□□ -2.01
Sh3rf2Q8BZT2 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Sh3rf2Q8BZT2 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Sh3rf2Q8BZT2 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Sh3rf2Q8BZT2 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
Sh3rf2Q8BZT2 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Sh3rf2Q8BZT2 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Sh3rf2Q8BZT2 Gm23589-201ENSMUST00000157660 105 ntBASIC2.51□□□□□ -2.01
Sh3rf2Q8BZT2 Gm24771-201ENSMUST00000158508 137 ntBASIC2.51□□□□□ -2.01
Sh3rf2Q8BZT2 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Sh3rf2Q8BZT2 Gm17113-201ENSMUST00000170118 171 ntBASIC2.51□□□□□ -2.01
Sh3rf2Q8BZT2 Mir6353-201ENSMUST00000183596 113 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 96 ms