Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm44425-201ENSMUST00000203739 429 ntBASIC3.6□□□□□ -1.83
Usp40Q8BWR4 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Usp40Q8BWR4 Gm23713-201ENSMUST00000157353 70 ntBASIC3.59□□□□□ -1.83
Usp40Q8BWR4 Gm22651-201ENSMUST00000157872 94 ntBASIC3.59□□□□□ -1.83
Usp40Q8BWR4 Gm22615-201ENSMUST00000158102 70 ntBASIC3.59□□□□□ -1.83
Usp40Q8BWR4 Gm17113-201ENSMUST00000170118 171 ntBASIC3.59□□□□□ -1.83
Usp40Q8BWR4 Gm10400-201ENSMUST00000203920 3835 ntBASIC3.59□□□□□ -1.83
Usp40Q8BWR4 Gm45116-201ENSMUST00000207392 275 ntBASIC3.59□□□□□ -1.83
Usp40Q8BWR4 AC160962.3-201ENSMUST00000225914 112 ntBASIC3.59□□□□□ -1.83
Usp40Q8BWR4 Gm26166-201ENSMUST00000083788 107 ntBASIC3.59□□□□□ -1.83
Usp40Q8BWR4 Mir466-201ENSMUST00000093591 73 ntBASIC3.59□□□□□ -1.83
Usp40Q8BWR4 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
Usp40Q8BWR4 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.59□□□□□ -1.84
Usp40Q8BWR4 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Usp40Q8BWR4 Gm8935-201ENSMUST00000066794 2798 ntBASIC3.58□□□□□ -1.84
Usp40Q8BWR4 AC117199.1-201ENSMUST00000219940 3132 ntBASIC3.58□□□□□ -1.84
Usp40Q8BWR4 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.58□□□□□ -1.84
Usp40Q8BWR4 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.58□□□□□ -1.84
Usp40Q8BWR4 Gm23256-201ENSMUST00000102235 110 ntBASIC3.58□□□□□ -1.84
Usp40Q8BWR4 Gm22477-201ENSMUST00000122569 316 ntBASIC3.58□□□□□ -1.84
Usp40Q8BWR4 n-R5s216-201ENSMUST00000122755 112 ntBASIC3.58□□□□□ -1.84
Usp40Q8BWR4 Gm22075-201ENSMUST00000158599 192 ntBASIC3.58□□□□□ -1.84
Usp40Q8BWR4 Mir5118-201ENSMUST00000175551 67 ntBASIC3.58□□□□□ -1.84
Usp40Q8BWR4 Gm27271-201ENSMUST00000183509 170 ntBASIC3.58□□□□□ -1.84
Usp40Q8BWR4 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.58□□□□□ -1.84
Usp40Q8BWR4 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC3.58□□□□□ -1.84
Usp40Q8BWR4 Gm45543-201ENSMUST00000209327 88 ntBASIC3.58□□□□□ -1.84
Usp40Q8BWR4 Gm22245-201ENSMUST00000082479 103 ntBASIC3.58□□□□□ -1.84
Usp40Q8BWR4 Gm23462-201ENSMUST00000083264 104 ntBASIC3.58□□□□□ -1.84
Usp40Q8BWR4 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Usp40Q8BWR4 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Usp40Q8BWR4 Mir92-1-201ENSMUST00000102108 80 ntBASIC3.57□□□□□ -1.84
Usp40Q8BWR4 Gm24276-201ENSMUST00000102181 110 ntBASIC3.57□□□□□ -1.84
Usp40Q8BWR4 Gm12449-201ENSMUST00000117572 234 ntBASIC3.57□□□□□ -1.84
Usp40Q8BWR4 Gm14215-201ENSMUST00000120578 221 ntBASIC3.57□□□□□ -1.84
Usp40Q8BWR4 Gm25269-201ENSMUST00000122601 104 ntBASIC3.57□□□□□ -1.84
Usp40Q8BWR4 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Usp40Q8BWR4 Gm45393-201ENSMUST00000211634 2631 ntBASIC3.57□□□□□ -1.84
Usp40Q8BWR4 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Usp40Q8BWR4 Gm23303-201ENSMUST00000082714 152 ntBASIC3.57□□□□□ -1.84
Usp40Q8BWR4 Gm24163-201ENSMUST00000093660 132 ntBASIC3.57□□□□□ -1.84
Usp40Q8BWR4 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.57□□□□□ -1.84
Usp40Q8BWR4 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
Usp40Q8BWR4 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Usp40Q8BWR4 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Usp40Q8BWR4 Gm26277-201ENSMUST00000157097 152 ntBASIC3.56□□□□□ -1.84
Usp40Q8BWR4 Gm23586-201ENSMUST00000157657 123 ntBASIC3.56□□□□□ -1.84
Usp40Q8BWR4 Gm26411-201ENSMUST00000157668 107 ntBASIC3.56□□□□□ -1.84
Usp40Q8BWR4 Gm27753-201ENSMUST00000184742 203 ntBASIC3.56□□□□□ -1.84
Usp40Q8BWR4 Gm38238-201ENSMUST00000194334 346 ntBASIC3.56□□□□□ -1.84
Usp40Q8BWR4 Gm5010-201ENSMUST00000213131 260 ntBASIC3.56□□□□□ -1.84
Usp40Q8BWR4 Gm24461-201ENSMUST00000082735 103 ntBASIC3.56□□□□□ -1.84
Usp40Q8BWR4 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC3.56□□□□□ -1.84
Usp40Q8BWR4 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
Usp40Q8BWR4 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Usp40Q8BWR4 AC153964.2-201ENSMUST00000217704 2474 ntBASIC3.55□□□□□ -1.84
Usp40Q8BWR4 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Usp40Q8BWR4 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Usp40Q8BWR4 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Usp40Q8BWR4 Mir693-201ENSMUST00000102187 89 ntBASIC3.55□□□□□ -1.84
Usp40Q8BWR4 Gm15733-201ENSMUST00000132957 242 ntBASIC3.55□□□□□ -1.84
Usp40Q8BWR4 Gm23409-201ENSMUST00000158516 237 ntBASIC3.55□□□□□ -1.84
Usp40Q8BWR4 Gm24053-201ENSMUST00000158620 105 ntBASIC3.55□□□□□ -1.84
Usp40Q8BWR4 Gm22665-201ENSMUST00000158720 275 ntBASIC3.55□□□□□ -1.84
Usp40Q8BWR4 Gm24811-201ENSMUST00000175313 100 ntBASIC3.55□□□□□ -1.84
Usp40Q8BWR4 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Usp40Q8BWR4 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Usp40Q8BWR4 Mir7657-201ENSMUST00000196051 57 ntBASIC3.55□□□□□ -1.84
Usp40Q8BWR4 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.55□□□□□ -1.84
Usp40Q8BWR4 AC133517.1-203ENSMUST00000225570 390 ntBASIC3.55□□□□□ -1.84
Usp40Q8BWR4 Gm22950-201ENSMUST00000082776 107 ntBASIC3.55□□□□□ -1.84
Usp40Q8BWR4 Gm24355-201ENSMUST00000082858 122 ntBASIC3.55□□□□□ -1.84
Usp40Q8BWR4 Gm25684-201ENSMUST00000083941 107 ntBASIC3.55□□□□□ -1.84
Usp40Q8BWR4 Gm42445-201ENSMUST00000196996 2893 ntBASIC3.55□□□□□ -1.84
Usp40Q8BWR4 Gm38706-201ENSMUST00000182397 2617 ntBASIC3.54□□□□□ -1.84
Usp40Q8BWR4 Mir767-201ENSMUST00000103256 107 ntBASIC3.54□□□□□ -1.84
Usp40Q8BWR4 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Usp40Q8BWR4 Gm26342-201ENSMUST00000104557 129 ntBASIC3.54□□□□□ -1.84
Usp40Q8BWR4 Gm25391-201ENSMUST00000157342 134 ntBASIC3.54□□□□□ -1.84
Usp40Q8BWR4 Gm25060-201ENSMUST00000157374 130 ntBASIC3.54□□□□□ -1.84
Usp40Q8BWR4 Gm22316-201ENSMUST00000158012 216 ntBASIC3.54□□□□□ -1.84
Usp40Q8BWR4 Mir7050-201ENSMUST00000184636 60 ntBASIC3.54□□□□□ -1.84
Usp40Q8BWR4 Gm44352-201ENSMUST00000196358 110 ntBASIC3.54□□□□□ -1.84
Usp40Q8BWR4 Igkv4-60-201ENSMUST00000200639 358 ntBASIC3.54□□□□□ -1.84
Usp40Q8BWR4 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.54□□□□□ -1.84
Usp40Q8BWR4 Gm22304-201ENSMUST00000082688 129 ntBASIC3.54□□□□□ -1.84
Usp40Q8BWR4 Snord14d-201ENSMUST00000083424 86 ntBASIC3.54□□□□□ -1.84
Usp40Q8BWR4 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Usp40Q8BWR4 Gm22752-201ENSMUST00000102083 109 ntBASIC3.53□□□□□ -1.84
Usp40Q8BWR4 Gm23889-201ENSMUST00000122689 104 ntBASIC3.53□□□□□ -1.84
Usp40Q8BWR4 Gm24358-201ENSMUST00000158424 288 ntBASIC3.53□□□□□ -1.84
Usp40Q8BWR4 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC3.53□□□□□ -1.84
Usp40Q8BWR4 Gm17067-202ENSMUST00000180131 123 ntBASIC3.53□□□□□ -1.84
Usp40Q8BWR4 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC3.53□□□□□ -1.84
Usp40Q8BWR4 AC159885.1-201ENSMUST00000222221 199 ntBASIC3.53□□□□□ -1.84
Usp40Q8BWR4 Gm15314-201ENSMUST00000120740 1887 ntBASIC3.53□□□□□ -1.84
Usp40Q8BWR4 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Usp40Q8BWR4 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Usp40Q8BWR4 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Usp40Q8BWR4 Gm23013-201ENSMUST00000104146 106 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 134.7 ms