Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.36□□□□□ -2.19
Ccdc40Q8BI79 Gm22656-201ENSMUST00000104199 171 ntBASIC1.36□□□□□ -2.19
Ccdc40Q8BI79 Gm17132-201ENSMUST00000109542 1158 ntBASIC1.36□□□□□ -2.19
Ccdc40Q8BI79 Gm12449-201ENSMUST00000117572 234 ntBASIC1.36□□□□□ -2.19
Ccdc40Q8BI79 Gm22556-201ENSMUST00000157803 100 ntBASIC1.36□□□□□ -2.19
Ccdc40Q8BI79 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
Ccdc40Q8BI79 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC1.36□□□□□ -2.19
Ccdc40Q8BI79 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC1.36□□□□□ -2.19
Ccdc40Q8BI79 Gm19855-201ENSMUST00000210145 249 ntBASIC1.36□□□□□ -2.19
Ccdc40Q8BI79 AC116589.3-202ENSMUST00000221770 649 ntBASIC1.36□□□□□ -2.19
Ccdc40Q8BI79 AC116589.6-201ENSMUST00000222252 649 ntBASIC1.36□□□□□ -2.19
Ccdc40Q8BI79 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.36□□□□□ -2.19
Ccdc40Q8BI79 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
Ccdc40Q8BI79 Gm24865-201ENSMUST00000103246 96 ntBASIC1.35□□□□□ -2.19
Ccdc40Q8BI79 Gm22935-201ENSMUST00000103960 104 ntBASIC1.35□□□□□ -2.19
Ccdc40Q8BI79 Gm26049-201ENSMUST00000157313 108 ntBASIC1.35□□□□□ -2.19
Ccdc40Q8BI79 Gm22136-201ENSMUST00000158751 268 ntBASIC1.35□□□□□ -2.19
Ccdc40Q8BI79 Gm24308-201ENSMUST00000177773 114 ntBASIC1.35□□□□□ -2.19
Ccdc40Q8BI79 Gm27793-201ENSMUST00000183405 76 ntBASIC1.35□□□□□ -2.19
Ccdc40Q8BI79 Mir6346-201ENSMUST00000183982 81 ntBASIC1.35□□□□□ -2.19
Ccdc40Q8BI79 Gm28414-201ENSMUST00000190111 294 ntBASIC1.35□□□□□ -2.19
Ccdc40Q8BI79 Gm25801-201ENSMUST00000082638 106 ntBASIC1.35□□□□□ -2.19
Ccdc40Q8BI79 Snord1a-201ENSMUST00000083160 74 ntBASIC1.35□□□□□ -2.19
Ccdc40Q8BI79 Gm23041-201ENSMUST00000083868 106 ntBASIC1.35□□□□□ -2.19
Ccdc40Q8BI79 BC022960-201ENSMUST00000119987 1815 ntBASIC1.34□□□□□ -2.19
Ccdc40Q8BI79 Gm15899-201ENSMUST00000128586 238 ntBASIC1.34□□□□□ -2.19
Ccdc40Q8BI79 Gm23435-201ENSMUST00000157183 156 ntBASIC1.34□□□□□ -2.19
Ccdc40Q8BI79 Gm24902-201ENSMUST00000158126 123 ntBASIC1.34□□□□□ -2.19
Ccdc40Q8BI79 Gm37918-201ENSMUST00000192071 120 ntBASIC1.34□□□□□ -2.19
Ccdc40Q8BI79 Gm42834-201ENSMUST00000196845 256 ntBASIC1.34□□□□□ -2.19
Ccdc40Q8BI79 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.34□□□□□ -2.19
Ccdc40Q8BI79 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
Ccdc40Q8BI79 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
Ccdc40Q8BI79 Gm22785-201ENSMUST00000104087 132 ntBASIC1.33□□□□□ -2.2
Ccdc40Q8BI79 Gm25832-201ENSMUST00000104140 130 ntBASIC1.33□□□□□ -2.2
Ccdc40Q8BI79 Gm24076-201ENSMUST00000158179 94 ntBASIC1.33□□□□□ -2.2
Ccdc40Q8BI79 Gm17067-202ENSMUST00000180131 123 ntBASIC1.33□□□□□ -2.2
Ccdc40Q8BI79 Mir7091-201ENSMUST00000184075 79 ntBASIC1.33□□□□□ -2.2
Ccdc40Q8BI79 Gm28257-201ENSMUST00000185244 463 ntBASIC1.33□□□□□ -2.2
Ccdc40Q8BI79 Gm45119-201ENSMUST00000207612 199 ntBASIC1.33□□□□□ -2.2
Ccdc40Q8BI79 AC122905.2-201ENSMUST00000220325 269 ntBASIC1.33□□□□□ -2.2
Ccdc40Q8BI79 AC151833.1-201ENSMUST00000227752 574 ntBASIC1.33□□□□□ -2.2
Ccdc40Q8BI79 AC114916.1-201ENSMUST00000228465 494 ntBASIC1.33□□□□□ -2.2
Ccdc40Q8BI79 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
Ccdc40Q8BI79 Gm24152-201ENSMUST00000082764 163 ntBASIC1.33□□□□□ -2.2
Ccdc40Q8BI79 Gm24494-201ENSMUST00000083804 81 ntBASIC1.33□□□□□ -2.2
Ccdc40Q8BI79 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Ccdc40Q8BI79 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Ccdc40Q8BI79 Gm26074-201ENSMUST00000104063 129 ntBASIC1.32□□□□□ -2.2
Ccdc40Q8BI79 Gm23836-201ENSMUST00000104434 129 ntBASIC1.32□□□□□ -2.2
Ccdc40Q8BI79 Gm22199-201ENSMUST00000122660 126 ntBASIC1.32□□□□□ -2.2
Ccdc40Q8BI79 Mir1967-201ENSMUST00000157789 82 ntBASIC1.32□□□□□ -2.2
Ccdc40Q8BI79 Gm22074-201ENSMUST00000158595 113 ntBASIC1.32□□□□□ -2.2
Ccdc40Q8BI79 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.32□□□□□ -2.2
Ccdc40Q8BI79 Gm24618-201ENSMUST00000177718 94 ntBASIC1.32□□□□□ -2.2
Ccdc40Q8BI79 Gm23953-201ENSMUST00000178214 94 ntBASIC1.32□□□□□ -2.2
Ccdc40Q8BI79 Gm26332-201ENSMUST00000179813 94 ntBASIC1.32□□□□□ -2.2
Ccdc40Q8BI79 Gm22863-201ENSMUST00000180265 94 ntBASIC1.32□□□□□ -2.2
Ccdc40Q8BI79 Gm42774-201ENSMUST00000198854 283 ntBASIC1.32□□□□□ -2.2
Ccdc40Q8BI79 Gm44726-201ENSMUST00000203427 217 ntBASIC1.32□□□□□ -2.2
Ccdc40Q8BI79 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC1.32□□□□□ -2.2
Ccdc40Q8BI79 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC1.32□□□□□ -2.2
Ccdc40Q8BI79 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.32□□□□□ -2.2
Ccdc40Q8BI79 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Ccdc40Q8BI79 Gm24356-201ENSMUST00000082859 106 ntBASIC1.32□□□□□ -2.2
Ccdc40Q8BI79 Mir1b-201ENSMUST00000117012 122 ntBASIC1.31□□□□□ -2.2
Ccdc40Q8BI79 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.31□□□□□ -2.2
Ccdc40Q8BI79 Gm22435-201ENSMUST00000158552 128 ntBASIC1.31□□□□□ -2.2
Ccdc40Q8BI79 Gm23419-201ENSMUST00000175523 84 ntBASIC1.31□□□□□ -2.2
Ccdc40Q8BI79 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.31□□□□□ -2.2
Ccdc40Q8BI79 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Ccdc40Q8BI79 Gm11891-201ENSMUST00000121241 619 ntBASIC1.3□□□□□ -2.2
Ccdc40Q8BI79 Gm22929-201ENSMUST00000175517 107 ntBASIC1.3□□□□□ -2.2
Ccdc40Q8BI79 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.3□□□□□ -2.2
Ccdc40Q8BI79 Gm43199-201ENSMUST00000200019 307 ntBASIC1.3□□□□□ -2.2
Ccdc40Q8BI79 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.3□□□□□ -2.2
Ccdc40Q8BI79 Gm33654-201ENSMUST00000221704 215 ntBASIC1.3□□□□□ -2.2
Ccdc40Q8BI79 Gm25789-201ENSMUST00000083294 76 ntBASIC1.3□□□□□ -2.2
Ccdc40Q8BI79 Mir133a-1-201ENSMUST00000083465 68 ntBASIC1.3□□□□□ -2.2
Ccdc40Q8BI79 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.29□□□□□ -2.2
Ccdc40Q8BI79 Mir1904-201ENSMUST00000122702 80 ntBASIC1.29□□□□□ -2.2
Ccdc40Q8BI79 Gm26363-201ENSMUST00000158866 83 ntBASIC1.29□□□□□ -2.2
Ccdc40Q8BI79 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.29□□□□□ -2.2
Ccdc40Q8BI79 Cfap61-214ENSMUST00000167179 183 ntBASIC1.29□□□□□ -2.2
Ccdc40Q8BI79 Gm26652-202ENSMUST00000181672 475 ntBASIC1.29□□□□□ -2.2
Ccdc40Q8BI79 Gm9227-201ENSMUST00000194733 566 ntBASIC1.29□□□□□ -2.2
Ccdc40Q8BI79 AC155712.1-201ENSMUST00000219704 160 ntBASIC1.29□□□□□ -2.2
Ccdc40Q8BI79 Gm12143-201ENSMUST00000119666 332 ntBASIC1.28□□□□□ -2.2
Ccdc40Q8BI79 Gm23230-201ENSMUST00000157298 133 ntBASIC1.28□□□□□ -2.2
Ccdc40Q8BI79 Gm20462-201ENSMUST00000172623 408 ntBASIC1.28□□□□□ -2.2
Ccdc40Q8BI79 Mir3569-201ENSMUST00000185080 58 ntBASIC1.28□□□□□ -2.2
Ccdc40Q8BI79 Gm38041-201ENSMUST00000194445 661 ntBASIC1.28□□□□□ -2.2
Ccdc40Q8BI79 Gm45704-201ENSMUST00000212582 403 ntBASIC1.28□□□□□ -2.2
Ccdc40Q8BI79 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.28□□□□□ -2.2
Ccdc40Q8BI79 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.28□□□□□ -2.2
Ccdc40Q8BI79 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.28□□□□□ -2.2
Ccdc40Q8BI79 Gm24038-201ENSMUST00000082872 159 ntBASIC1.28□□□□□ -2.2
Ccdc40Q8BI79 Gm24261-201ENSMUST00000083744 104 ntBASIC1.28□□□□□ -2.2
Ccdc40Q8BI79 Gm42755-201ENSMUST00000198533 1493 ntBASIC1.28□□□□□ -2.2
Ccdc40Q8BI79 Gm12080-201ENSMUST00000119821 1883 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms