Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm14846-201ENSMUST00000121868 216 ntBASIC2.41□□□□□ -2.02
Ubfd1Q78JW9 n-R5s150-201ENSMUST00000122705 108 ntBASIC2.41□□□□□ -2.02
Ubfd1Q78JW9 Gm23600-201ENSMUST00000157260 71 ntBASIC2.41□□□□□ -2.02
Ubfd1Q78JW9 Gm23599-201ENSMUST00000157261 251 ntBASIC2.41□□□□□ -2.02
Ubfd1Q78JW9 Gm23324-201ENSMUST00000157421 131 ntBASIC2.41□□□□□ -2.02
Ubfd1Q78JW9 Gm25333-201ENSMUST00000158035 246 ntBASIC2.41□□□□□ -2.02
Ubfd1Q78JW9 Gm24212-201ENSMUST00000158258 132 ntBASIC2.41□□□□□ -2.02
Ubfd1Q78JW9 Gm22664-201ENSMUST00000158719 105 ntBASIC2.41□□□□□ -2.02
Ubfd1Q78JW9 Gm25024-201ENSMUST00000179667 104 ntBASIC2.41□□□□□ -2.02
Ubfd1Q78JW9 Gm25235-201ENSMUST00000179933 107 ntBASIC2.41□□□□□ -2.02
Ubfd1Q78JW9 Mir6540-201ENSMUST00000184886 108 ntBASIC2.41□□□□□ -2.02
Ubfd1Q78JW9 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC2.41□□□□□ -2.02
Ubfd1Q78JW9 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.41□□□□□ -2.02
Ubfd1Q78JW9 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC2.41□□□□□ -2.02
Ubfd1Q78JW9 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.41□□□□□ -2.02
Ubfd1Q78JW9 Gm24049-201ENSMUST00000102409 100 ntBASIC2.4□□□□□ -2.03
Ubfd1Q78JW9 Gm23492-201ENSMUST00000116837 115 ntBASIC2.4□□□□□ -2.03
Ubfd1Q78JW9 Gm23141-201ENSMUST00000178682 94 ntBASIC2.4□□□□□ -2.03
Ubfd1Q78JW9 Gm28992-201ENSMUST00000190534 139 ntBASIC2.4□□□□□ -2.03
Ubfd1Q78JW9 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Ubfd1Q78JW9 Gm11351-202ENSMUST00000225724 478 ntBASIC2.4□□□□□ -2.03
Ubfd1Q78JW9 Gm24204-201ENSMUST00000082950 107 ntBASIC2.4□□□□□ -2.03
Ubfd1Q78JW9 Mir29c-201ENSMUST00000083614 88 ntBASIC2.4□□□□□ -2.03
Ubfd1Q78JW9 Gm26175-201ENSMUST00000083794 131 ntBASIC2.4□□□□□ -2.03
Ubfd1Q78JW9 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Ubfd1Q78JW9 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.4□□□□□ -2.03
Ubfd1Q78JW9 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.4□□□□□ -2.03
Ubfd1Q78JW9 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Ubfd1Q78JW9 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
Ubfd1Q78JW9 Gm22752-201ENSMUST00000102083 109 ntBASIC2.39□□□□□ -2.03
Ubfd1Q78JW9 Gm24280-201ENSMUST00000104237 134 ntBASIC2.39□□□□□ -2.03
Ubfd1Q78JW9 Mir881-201ENSMUST00000104844 78 ntBASIC2.39□□□□□ -2.03
Ubfd1Q78JW9 Gm12797-201ENSMUST00000118645 273 ntBASIC2.39□□□□□ -2.03
Ubfd1Q78JW9 Gm22221-201ENSMUST00000157362 103 ntBASIC2.39□□□□□ -2.03
Ubfd1Q78JW9 Gm24392-201ENSMUST00000158136 103 ntBASIC2.39□□□□□ -2.03
Ubfd1Q78JW9 Gm24667-201ENSMUST00000158938 103 ntBASIC2.39□□□□□ -2.03
Ubfd1Q78JW9 Gm25707-201ENSMUST00000175120 96 ntBASIC2.39□□□□□ -2.03
Ubfd1Q78JW9 Gm25615-201ENSMUST00000177836 94 ntBASIC2.39□□□□□ -2.03
Ubfd1Q78JW9 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Ubfd1Q78JW9 Gm44533-201ENSMUST00000207782 268 ntBASIC2.39□□□□□ -2.03
Ubfd1Q78JW9 Gm45907-201ENSMUST00000213023 193 ntBASIC2.39□□□□□ -2.03
Ubfd1Q78JW9 Gm6109-201ENSMUST00000223297 348 ntBASIC2.39□□□□□ -2.03
Ubfd1Q78JW9 Gm24522-201ENSMUST00000083964 108 ntBASIC2.39□□□□□ -2.03
Ubfd1Q78JW9 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Ubfd1Q78JW9 Gm25421-201ENSMUST00000104218 164 ntBASIC2.38□□□□□ -2.03
Ubfd1Q78JW9 Gm23219-201ENSMUST00000158123 87 ntBASIC2.38□□□□□ -2.03
Ubfd1Q78JW9 Gm23542-201ENSMUST00000158208 96 ntBASIC2.38□□□□□ -2.03
Ubfd1Q78JW9 Gm22517-201ENSMUST00000158265 136 ntBASIC2.38□□□□□ -2.03
Ubfd1Q78JW9 Gm23005-201ENSMUST00000158950 136 ntBASIC2.38□□□□□ -2.03
Ubfd1Q78JW9 Gm26435-201ENSMUST00000179026 107 ntBASIC2.38□□□□□ -2.03
Ubfd1Q78JW9 Gm27369-201ENSMUST00000185182 71 ntBASIC2.38□□□□□ -2.03
Ubfd1Q78JW9 Gm29657-201ENSMUST00000189807 342 ntBASIC2.38□□□□□ -2.03
Ubfd1Q78JW9 Gm37586-201ENSMUST00000193654 204 ntBASIC2.38□□□□□ -2.03
Ubfd1Q78JW9 Gm45013-201ENSMUST00000206883 178 ntBASIC2.38□□□□□ -2.03
Ubfd1Q78JW9 Gm45386-201ENSMUST00000210194 218 ntBASIC2.38□□□□□ -2.03
Ubfd1Q78JW9 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Ubfd1Q78JW9 Gm46997-201ENSMUST00000222108 217 ntBASIC2.38□□□□□ -2.03
Ubfd1Q78JW9 Mir181b-2-201ENSMUST00000083644 89 ntBASIC2.38□□□□□ -2.03
Ubfd1Q78JW9 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.38□□□□□ -2.03
Ubfd1Q78JW9 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Ubfd1Q78JW9 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Ubfd1Q78JW9 Mir374b-201ENSMUST00000102314 95 ntBASIC2.37□□□□□ -2.03
Ubfd1Q78JW9 Gm23705-201ENSMUST00000104370 130 ntBASIC2.37□□□□□ -2.03
Ubfd1Q78JW9 Gm25529-201ENSMUST00000104850 92 ntBASIC2.37□□□□□ -2.03
Ubfd1Q78JW9 Gm12512-201ENSMUST00000119620 217 ntBASIC2.37□□□□□ -2.03
Ubfd1Q78JW9 Gm12686-201ENSMUST00000120546 397 ntBASIC2.37□□□□□ -2.03
Ubfd1Q78JW9 Gm24436-201ENSMUST00000157889 302 ntBASIC2.37□□□□□ -2.03
Ubfd1Q78JW9 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC2.37□□□□□ -2.03
Ubfd1Q78JW9 Mir7068-201ENSMUST00000183439 74 ntBASIC2.37□□□□□ -2.03
Ubfd1Q78JW9 Gm27878-201ENSMUST00000184000 106 ntBASIC2.37□□□□□ -2.03
Ubfd1Q78JW9 Gm37377-201ENSMUST00000191733 304 ntBASIC2.37□□□□□ -2.03
Ubfd1Q78JW9 Mir6925-201ENSMUST00000197857 70 ntBASIC2.37□□□□□ -2.03
Ubfd1Q78JW9 AC164086.1-201ENSMUST00000221038 289 ntBASIC2.37□□□□□ -2.03
Ubfd1Q78JW9 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.37□□□□□ -2.03
Ubfd1Q78JW9 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Ubfd1Q78JW9 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Ubfd1Q78JW9 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.37□□□□□ -2.03
Ubfd1Q78JW9 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Ubfd1Q78JW9 Mir767-201ENSMUST00000103256 107 ntBASIC2.36□□□□□ -2.03
Ubfd1Q78JW9 Gm24283-201ENSMUST00000104233 107 ntBASIC2.36□□□□□ -2.03
Ubfd1Q78JW9 Gm17052-201ENSMUST00000165496 289 ntBASIC2.36□□□□□ -2.03
Ubfd1Q78JW9 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Ubfd1Q78JW9 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC2.36□□□□□ -2.03
Ubfd1Q78JW9 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Ubfd1Q78JW9 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Ubfd1Q78JW9 Gm3852-201ENSMUST00000182781 264 ntBASIC2.36□□□□□ -2.03
Ubfd1Q78JW9 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Ubfd1Q78JW9 Gm28169-201ENSMUST00000190342 345 ntBASIC2.36□□□□□ -2.03
Ubfd1Q78JW9 Gm44555-201ENSMUST00000209008 148 ntBASIC2.36□□□□□ -2.03
Ubfd1Q78JW9 Gm45859-201ENSMUST00000212794 214 ntBASIC2.36□□□□□ -2.03
Ubfd1Q78JW9 AC098718.2-201ENSMUST00000226822 285 ntBASIC2.36□□□□□ -2.03
Ubfd1Q78JW9 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.36□□□□□ -2.03
Ubfd1Q78JW9 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.35□□□□□ -2.03
Ubfd1Q78JW9 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Ubfd1Q78JW9 n-R5s158-201ENSMUST00000104095 118 ntBASIC2.35□□□□□ -2.03
Ubfd1Q78JW9 Gm23015-201ENSMUST00000104145 128 ntBASIC2.35□□□□□ -2.03
Ubfd1Q78JW9 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.35□□□□□ -2.03
Ubfd1Q78JW9 Gm20438-201ENSMUST00000174441 329 ntBASIC2.35□□□□□ -2.03
Ubfd1Q78JW9 Mir6353-201ENSMUST00000183596 113 ntBASIC2.35□□□□□ -2.03
Ubfd1Q78JW9 Gm19123-201ENSMUST00000190716 651 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 128.5 ms