Protein–RNA interactions for Protein: Q6ZQF0

Topbp1, DNA topoisomerase 2-binding protein 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1Q6ZQF0 Gm27421-201ENSMUST00000184729 167 ntBASIC0.03□□□□□ -2.4
Topbp1Q6ZQF0 Gm42958-201ENSMUST00000197595 318 ntBASIC0.03□□□□□ -2.4
Topbp1Q6ZQF0 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC0.03□□□□□ -2.4
Topbp1Q6ZQF0 AC123656.2-201ENSMUST00000226726 227 ntBASIC0.03□□□□□ -2.4
Topbp1Q6ZQF0 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
Topbp1Q6ZQF0 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
Topbp1Q6ZQF0 Gm8858-201ENSMUST00000118259 342 ntBASIC0.03□□□□□ -2.41
Topbp1Q6ZQF0 Gm24836-201ENSMUST00000122609 108 ntBASIC0.03□□□□□ -2.41
Topbp1Q6ZQF0 Gm25156-201ENSMUST00000179809 79 ntBASIC0.03□□□□□ -2.41
Topbp1Q6ZQF0 Gm22263-201ENSMUST00000180060 104 ntBASIC0.03□□□□□ -2.41
Topbp1Q6ZQF0 Gm45658-201ENSMUST00000209197 580 ntBASIC0.03□□□□□ -2.41
Topbp1Q6ZQF0 Gm5010-201ENSMUST00000213131 260 ntBASIC0.03□□□□□ -2.41
Topbp1Q6ZQF0 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.41
Topbp1Q6ZQF0 Gm12016-201ENSMUST00000119079 681 ntBASIC0.02□□□□□ -2.41
Topbp1Q6ZQF0 Gm11792-201ENSMUST00000120640 168 ntBASIC0.02□□□□□ -2.41
Topbp1Q6ZQF0 Gm25952-201ENSMUST00000175329 74 ntBASIC0.02□□□□□ -2.41
Topbp1Q6ZQF0 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC0.02□□□□□ -2.41
Topbp1Q6ZQF0 Mir6411-201ENSMUST00000183556 108 ntBASIC0.02□□□□□ -2.41
Topbp1Q6ZQF0 Gm37923-201ENSMUST00000191624 161 ntBASIC0.02□□□□□ -2.41
Topbp1Q6ZQF0 Gm44491-201ENSMUST00000196794 96 ntBASIC0.02□□□□□ -2.41
Topbp1Q6ZQF0 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC0.02□□□□□ -2.41
Topbp1Q6ZQF0 Gm45265-201ENSMUST00000210852 2497 ntBASIC0.01□□□□□ -2.41
Topbp1Q6ZQF0 Gm25088-201ENSMUST00000101803 79 ntBASIC0.01□□□□□ -2.41
Topbp1Q6ZQF0 Gm22193-201ENSMUST00000116868 76 ntBASIC0.01□□□□□ -2.41
Topbp1Q6ZQF0 Gm22038-201ENSMUST00000157277 242 ntBASIC0.01□□□□□ -2.41
Topbp1Q6ZQF0 Gm29216-201ENSMUST00000187117 492 ntBASIC0.01□□□□□ -2.41
Topbp1Q6ZQF0 Ighv1-32-201ENSMUST00000195149 351 ntBASIC0.01□□□□□ -2.41
Topbp1Q6ZQF0 Gm18971-201ENSMUST00000197240 374 ntBASIC0.01□□□□□ -2.41
Topbp1Q6ZQF0 Gm19855-201ENSMUST00000210145 249 ntBASIC0.01□□□□□ -2.41
Topbp1Q6ZQF0 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
Topbp1Q6ZQF0 Gm26446-201ENSMUST00000082455 103 ntBASIC0.01□□□□□ -2.41
Topbp1Q6ZQF0 Gm26263-201ENSMUST00000083281 164 ntBASIC0.01□□□□□ -2.41
Topbp1Q6ZQF0 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC0.01□□□□□ -2.41
Topbp1Q6ZQF0 Mir883a-201ENSMUST00000104824 76 ntBASIC0□□□□□ -2.41
Topbp1Q6ZQF0 Gm28666-201ENSMUST00000186649 274 ntBASIC0□□□□□ -2.41
Topbp1Q6ZQF0 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC0□□□□□ -2.41
Topbp1Q6ZQF0 Gm44921-201ENSMUST00000205290 301 ntBASIC0□□□□□ -2.41
Topbp1Q6ZQF0 Gm45541-201ENSMUST00000210443 54 ntBASIC0□□□□□ -2.41
Topbp1Q6ZQF0 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC0□□□□□ -2.41
Topbp1Q6ZQF0 AC159621.1-201ENSMUST00000223249 163 ntBASIC0□□□□□ -2.41
Topbp1Q6ZQF0 Gm25703-201ENSMUST00000083123 151 ntBASIC0□□□□□ -2.41
Topbp1Q6ZQF0 Gm14269-201ENSMUST00000120455 306 ntBASIC-0.01□□□□□ -2.41
Topbp1Q6ZQF0 Gm15213-201ENSMUST00000122098 216 ntBASIC-0.01□□□□□ -2.41
Topbp1Q6ZQF0 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
Topbp1Q6ZQF0 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
Topbp1Q6ZQF0 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
Topbp1Q6ZQF0 Gm27735-201ENSMUST00000185085 76 ntBASIC-0.01□□□□□ -2.41
Topbp1Q6ZQF0 Gm37709-201ENSMUST00000195074 600 ntBASIC-0.01□□□□□ -2.41
Topbp1Q6ZQF0 Gm34073-201ENSMUST00000195736 212 ntBASIC-0.01□□□□□ -2.41
Topbp1Q6ZQF0 Gm42976-201ENSMUST00000200313 222 ntBASIC-0.01□□□□□ -2.41
Topbp1Q6ZQF0 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC-0.01□□□□□ -2.41
Topbp1Q6ZQF0 AC113305.1-201ENSMUST00000214664 724 ntBASIC-0.01□□□□□ -2.41
Topbp1Q6ZQF0 Gm14846-201ENSMUST00000121868 216 ntBASIC-0.02□□□□□ -2.41
Topbp1Q6ZQF0 Gm25294-201ENSMUST00000122791 104 ntBASIC-0.02□□□□□ -2.41
Topbp1Q6ZQF0 Gm15914-201ENSMUST00000161922 309 ntBASIC-0.02□□□□□ -2.41
Topbp1Q6ZQF0 Gm18396-201ENSMUST00000177095 361 ntBASIC-0.02□□□□□ -2.41
Topbp1Q6ZQF0 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC-0.02□□□□□ -2.41
Topbp1Q6ZQF0 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC-0.02□□□□□ -2.41
Topbp1Q6ZQF0 Gm4076-201ENSMUST00000179230 965 ntBASIC-0.02□□□□□ -2.41
Topbp1Q6ZQF0 Gm5116-201ENSMUST00000187732 463 ntBASIC-0.02□□□□□ -2.41
Topbp1Q6ZQF0 Gm6003-201ENSMUST00000187903 463 ntBASIC-0.02□□□□□ -2.41
Topbp1Q6ZQF0 Gm29627-201ENSMUST00000187984 463 ntBASIC-0.02□□□□□ -2.41
Topbp1Q6ZQF0 Gm28921-201ENSMUST00000190219 378 ntBASIC-0.02□□□□□ -2.41
Topbp1Q6ZQF0 Gm44137-201ENSMUST00000203670 367 ntBASIC-0.02□□□□□ -2.41
Topbp1Q6ZQF0 Gm19032-201ENSMUST00000208584 592 ntBASIC-0.02□□□□□ -2.41
Topbp1Q6ZQF0 Gm44554-201ENSMUST00000208738 147 ntBASIC-0.02□□□□□ -2.41
Topbp1Q6ZQF0 AC122769.2-201ENSMUST00000227248 302 ntBASIC-0.02□□□□□ -2.41
Topbp1Q6ZQF0 AC151902.1-201ENSMUST00000227800 375 ntBASIC-0.02□□□□□ -2.41
Topbp1Q6ZQF0 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
Topbp1Q6ZQF0 Snord82-201ENSMUST00000082889 70 ntBASIC-0.02□□□□□ -2.41
Topbp1Q6ZQF0 Mir324-201ENSMUST00000083600 89 ntBASIC-0.02□□□□□ -2.41
Topbp1Q6ZQF0 Gm26168-201ENSMUST00000083787 112 ntBASIC-0.02□□□□□ -2.41
Topbp1Q6ZQF0 Gm12881-201ENSMUST00000121191 203 ntBASIC-0.03□□□□□ -2.41
Topbp1Q6ZQF0 Gm22076-201ENSMUST00000158601 84 ntBASIC-0.03□□□□□ -2.41
Topbp1Q6ZQF0 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC-0.03□□□□□ -2.41
Topbp1Q6ZQF0 Gm25120-201ENSMUST00000180148 79 ntBASIC-0.03□□□□□ -2.41
Topbp1Q6ZQF0 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC-0.03□□□□□ -2.41
Topbp1Q6ZQF0 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC-0.03□□□□□ -2.41
Topbp1Q6ZQF0 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC-0.03□□□□□ -2.41
Topbp1Q6ZQF0 Gm46997-201ENSMUST00000222108 217 ntBASIC-0.03□□□□□ -2.41
Topbp1Q6ZQF0 AC192334.2-201ENSMUST00000223087 1091 ntBASIC-0.03□□□□□ -2.41
Topbp1Q6ZQF0 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC-0.03□□□□□ -2.41
Topbp1Q6ZQF0 Mir382-201ENSMUST00000083494 76 ntBASIC-0.03□□□□□ -2.41
Topbp1Q6ZQF0 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC-0.03□□□□□ -2.41
Topbp1Q6ZQF0 Gm25558-201ENSMUST00000158083 106 ntBASIC-0.03□□□□□ -2.41
Topbp1Q6ZQF0 Gm23387-201ENSMUST00000158586 107 ntBASIC-0.03□□□□□ -2.41
Topbp1Q6ZQF0 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
Topbp1Q6ZQF0 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
Topbp1Q6ZQF0 Gm27715-201ENSMUST00000184714 260 ntBASIC-0.03□□□□□ -2.41
Topbp1Q6ZQF0 Gm28257-201ENSMUST00000185244 463 ntBASIC-0.03□□□□□ -2.41
Topbp1Q6ZQF0 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC-0.03□□□□□ -2.41
Topbp1Q6ZQF0 AC109212.1-201ENSMUST00000215561 427 ntBASIC-0.03□□□□□ -2.41
Topbp1Q6ZQF0 AC122341.1-201ENSMUST00000227291 560 ntBASIC-0.03□□□□□ -2.41
Topbp1Q6ZQF0 Gm24784-201ENSMUST00000157640 62 ntBASIC-0.04□□□□□ -2.42
Topbp1Q6ZQF0 Gm23068-201ENSMUST00000158239 293 ntBASIC-0.04□□□□□ -2.42
Topbp1Q6ZQF0 Gm22668-201ENSMUST00000158716 260 ntBASIC-0.04□□□□□ -2.42
Topbp1Q6ZQF0 Gm25643-201ENSMUST00000158874 103 ntBASIC-0.04□□□□□ -2.42
Topbp1Q6ZQF0 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC-0.04□□□□□ -2.42
Topbp1Q6ZQF0 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC-0.04□□□□□ -2.42
Topbp1Q6ZQF0 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC-0.04□□□□□ -2.42
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms