Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Ddx55Q6ZPL9 Gm23472-201ENSMUST00000101806 191 ntBASIC2.85□□□□□ -1.95
Ddx55Q6ZPL9 Gm14838-201ENSMUST00000118913 248 ntBASIC2.85□□□□□ -1.95
Ddx55Q6ZPL9 Gm23048-201ENSMUST00000157237 129 ntBASIC2.85□□□□□ -1.95
Ddx55Q6ZPL9 Gm24497-201ENSMUST00000177868 191 ntBASIC2.85□□□□□ -1.95
Ddx55Q6ZPL9 Gm22264-201ENSMUST00000178200 107 ntBASIC2.85□□□□□ -1.95
Ddx55Q6ZPL9 Gm29022-201ENSMUST00000190702 225 ntBASIC2.85□□□□□ -1.95
Ddx55Q6ZPL9 Gm43220-201ENSMUST00000199299 282 ntBASIC2.85□□□□□ -1.95
Ddx55Q6ZPL9 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.85□□□□□ -1.95
Ddx55Q6ZPL9 Gm22299-201ENSMUST00000082663 136 ntBASIC2.85□□□□□ -1.95
Ddx55Q6ZPL9 Gm23444-201ENSMUST00000082922 191 ntBASIC2.85□□□□□ -1.95
Ddx55Q6ZPL9 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Ddx55Q6ZPL9 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.85□□□□□ -1.95
Ddx55Q6ZPL9 Mir466h-201ENSMUST00000104748 81 ntBASIC2.84□□□□□ -1.95
Ddx55Q6ZPL9 Gm22678-201ENSMUST00000116974 101 ntBASIC2.84□□□□□ -1.95
Ddx55Q6ZPL9 Gm23470-201ENSMUST00000157129 120 ntBASIC2.84□□□□□ -1.95
Ddx55Q6ZPL9 Gm24480-201ENSMUST00000157442 103 ntBASIC2.84□□□□□ -1.95
Ddx55Q6ZPL9 Gm25654-201ENSMUST00000158467 88 ntBASIC2.84□□□□□ -1.95
Ddx55Q6ZPL9 Gm25253-201ENSMUST00000179958 107 ntBASIC2.84□□□□□ -1.95
Ddx55Q6ZPL9 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC2.84□□□□□ -1.95
Ddx55Q6ZPL9 Gm42834-201ENSMUST00000196845 256 ntBASIC2.84□□□□□ -1.95
Ddx55Q6ZPL9 Gm43993-201ENSMUST00000203972 247 ntBASIC2.84□□□□□ -1.95
Ddx55Q6ZPL9 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.84□□□□□ -1.95
Ddx55Q6ZPL9 Gm18991-201ENSMUST00000209225 746 ntBASIC2.84□□□□□ -1.95
Ddx55Q6ZPL9 AC159896.1-201ENSMUST00000215264 215 ntBASIC2.84□□□□□ -1.95
Ddx55Q6ZPL9 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Ddx55Q6ZPL9 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Ddx55Q6ZPL9 Gm24121-201ENSMUST00000102029 106 ntBASIC2.83□□□□□ -1.96
Ddx55Q6ZPL9 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Ddx55Q6ZPL9 Gm6897-201ENSMUST00000117714 138 ntBASIC2.83□□□□□ -1.96
Ddx55Q6ZPL9 Gm14758-201ENSMUST00000119104 138 ntBASIC2.83□□□□□ -1.96
Ddx55Q6ZPL9 Gm11414-201ENSMUST00000121795 263 ntBASIC2.83□□□□□ -1.96
Ddx55Q6ZPL9 Trav20-201ENSMUST00000142754 347 ntBASIC2.83□□□□□ -1.96
Ddx55Q6ZPL9 Gm25470-201ENSMUST00000175576 111 ntBASIC2.83□□□□□ -1.96
Ddx55Q6ZPL9 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.83□□□□□ -1.96
Ddx55Q6ZPL9 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.83□□□□□ -1.96
Ddx55Q6ZPL9 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.83□□□□□ -1.96
Ddx55Q6ZPL9 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
Ddx55Q6ZPL9 Gm11786-201ENSMUST00000120799 155 ntBASIC2.82□□□□□ -1.96
Ddx55Q6ZPL9 Gm26099-201ENSMUST00000157248 109 ntBASIC2.82□□□□□ -1.96
Ddx55Q6ZPL9 Gm23545-201ENSMUST00000158205 104 ntBASIC2.82□□□□□ -1.96
Ddx55Q6ZPL9 Gm23409-201ENSMUST00000158516 237 ntBASIC2.82□□□□□ -1.96
Ddx55Q6ZPL9 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Ddx55Q6ZPL9 Gm27793-201ENSMUST00000183405 76 ntBASIC2.82□□□□□ -1.96
Ddx55Q6ZPL9 Gm27753-201ENSMUST00000184742 203 ntBASIC2.82□□□□□ -1.96
Ddx55Q6ZPL9 Gm32175-201ENSMUST00000193641 346 ntBASIC2.82□□□□□ -1.96
Ddx55Q6ZPL9 Mir497-201ENSMUST00000200557 84 ntBASIC2.82□□□□□ -1.96
Ddx55Q6ZPL9 AC157476.1-201ENSMUST00000215555 169 ntBASIC2.82□□□□□ -1.96
Ddx55Q6ZPL9 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.82□□□□□ -1.96
Ddx55Q6ZPL9 AC123860.1-201ENSMUST00000228033 481 ntBASIC2.82□□□□□ -1.96
Ddx55Q6ZPL9 Gm24457-201ENSMUST00000083196 105 ntBASIC2.82□□□□□ -1.96
Ddx55Q6ZPL9 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Ddx55Q6ZPL9 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Ddx55Q6ZPL9 Gm23492-201ENSMUST00000116837 115 ntBASIC2.81□□□□□ -1.96
Ddx55Q6ZPL9 Gm12213-201ENSMUST00000119924 353 ntBASIC2.81□□□□□ -1.96
Ddx55Q6ZPL9 n-R5s150-201ENSMUST00000122705 108 ntBASIC2.81□□□□□ -1.96
Ddx55Q6ZPL9 Gm25390-201ENSMUST00000157341 103 ntBASIC2.81□□□□□ -1.96
Ddx55Q6ZPL9 Gm22097-201ENSMUST00000157929 278 ntBASIC2.81□□□□□ -1.96
Ddx55Q6ZPL9 Gm24771-201ENSMUST00000158508 137 ntBASIC2.81□□□□□ -1.96
Ddx55Q6ZPL9 Gm22416-201ENSMUST00000158590 88 ntBASIC2.81□□□□□ -1.96
Ddx55Q6ZPL9 Gm25119-201ENSMUST00000158815 88 ntBASIC2.81□□□□□ -1.96
Ddx55Q6ZPL9 Gm6788-201ENSMUST00000166459 270 ntBASIC2.81□□□□□ -1.96
Ddx55Q6ZPL9 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC2.81□□□□□ -1.96
Ddx55Q6ZPL9 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Ddx55Q6ZPL9 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Ddx55Q6ZPL9 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Ddx55Q6ZPL9 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.8□□□□□ -1.96
Ddx55Q6ZPL9 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Ddx55Q6ZPL9 Gm13885-201ENSMUST00000117569 187 ntBASIC2.8□□□□□ -1.96
Ddx55Q6ZPL9 Gm26026-201ENSMUST00000122726 123 ntBASIC2.8□□□□□ -1.96
Ddx55Q6ZPL9 Gm23535-201ENSMUST00000157542 106 ntBASIC2.8□□□□□ -1.96
Ddx55Q6ZPL9 Gm24212-201ENSMUST00000158258 132 ntBASIC2.8□□□□□ -1.96
Ddx55Q6ZPL9 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.8□□□□□ -1.96
Ddx55Q6ZPL9 Gm16326-201ENSMUST00000162843 414 ntBASIC2.8□□□□□ -1.96
Ddx55Q6ZPL9 Gm25933-201ENSMUST00000178943 108 ntBASIC2.8□□□□□ -1.96
Ddx55Q6ZPL9 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC2.8□□□□□ -1.96
Ddx55Q6ZPL9 Mir1291-201ENSMUST00000199842 117 ntBASIC2.8□□□□□ -1.96
Ddx55Q6ZPL9 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Ddx55Q6ZPL9 Gm24625-201ENSMUST00000082622 130 ntBASIC2.8□□□□□ -1.96
Ddx55Q6ZPL9 Snora34-201ENSMUST00000083402 138 ntBASIC2.8□□□□□ -1.96
Ddx55Q6ZPL9 Mir322-201ENSMUST00000083484 95 ntBASIC2.8□□□□□ -1.96
Ddx55Q6ZPL9 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
Ddx55Q6ZPL9 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.8□□□□□ -1.96
Ddx55Q6ZPL9 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Ddx55Q6ZPL9 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Ddx55Q6ZPL9 Gm23381-201ENSMUST00000157676 94 ntBASIC2.79□□□□□ -1.96
Ddx55Q6ZPL9 Gm25888-201ENSMUST00000157778 302 ntBASIC2.79□□□□□ -1.96
Ddx55Q6ZPL9 Mir1936-201ENSMUST00000158699 93 ntBASIC2.79□□□□□ -1.96
Ddx55Q6ZPL9 Mir28b-201ENSMUST00000175399 80 ntBASIC2.79□□□□□ -1.96
Ddx55Q6ZPL9 Gm29597-201ENSMUST00000188035 308 ntBASIC2.79□□□□□ -1.96
Ddx55Q6ZPL9 Gm28647-201ENSMUST00000188416 197 ntBASIC2.79□□□□□ -1.96
Ddx55Q6ZPL9 Gm29014-201ENSMUST00000191422 326 ntBASIC2.79□□□□□ -1.96
Ddx55Q6ZPL9 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.79□□□□□ -1.96
Ddx55Q6ZPL9 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.79□□□□□ -1.96
Ddx55Q6ZPL9 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
Ddx55Q6ZPL9 Gm23246-201ENSMUST00000083371 67 ntBASIC2.79□□□□□ -1.96
Ddx55Q6ZPL9 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Ddx55Q6ZPL9 Mir878-201ENSMUST00000104680 78 ntBASIC2.78□□□□□ -1.96
Ddx55Q6ZPL9 Gm22193-201ENSMUST00000116868 76 ntBASIC2.78□□□□□ -1.96
Ddx55Q6ZPL9 Gm11204-201ENSMUST00000122438 147 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms