Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Mir3535-201ENSMUST00000197651 147 ntBASIC2.5□□□□□ -2.01
Ddx58Q6Q899 Gm20144-201ENSMUST00000203031 165 ntBASIC2.5□□□□□ -2.01
Ddx58Q6Q899 Gm25930-201ENSMUST00000082785 107 ntBASIC2.5□□□□□ -2.01
Ddx58Q6Q899 Gm23055-201ENSMUST00000082805 94 ntBASIC2.5□□□□□ -2.01
Ddx58Q6Q899 Mir93-201ENSMUST00000083593 88 ntBASIC2.5□□□□□ -2.01
Ddx58Q6Q899 AC102369.2-201ENSMUST00000219725 1679 ntBASIC2.5□□□□□ -2.01
Ddx58Q6Q899 AC154515.1-201ENSMUST00000226085 2841 ntBASIC2.5□□□□□ -2.01
Ddx58Q6Q899 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
Ddx58Q6Q899 Gm11786-201ENSMUST00000120799 155 ntBASIC2.49□□□□□ -2.01
Ddx58Q6Q899 Gm13725-201ENSMUST00000122139 207 ntBASIC2.49□□□□□ -2.01
Ddx58Q6Q899 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Ddx58Q6Q899 Gm22448-201ENSMUST00000179254 107 ntBASIC2.49□□□□□ -2.01
Ddx58Q6Q899 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC2.49□□□□□ -2.01
Ddx58Q6Q899 Gm37801-201ENSMUST00000194754 274 ntBASIC2.49□□□□□ -2.01
Ddx58Q6Q899 Gm42834-201ENSMUST00000196845 256 ntBASIC2.49□□□□□ -2.01
Ddx58Q6Q899 Gm44655-201ENSMUST00000207768 423 ntBASIC2.49□□□□□ -2.01
Ddx58Q6Q899 Gm22287-201ENSMUST00000083197 107 ntBASIC2.49□□□□□ -2.01
Ddx58Q6Q899 Gm25789-201ENSMUST00000083294 76 ntBASIC2.49□□□□□ -2.01
Ddx58Q6Q899 Snora69-201ENSMUST00000083708 131 ntBASIC2.49□□□□□ -2.01
Ddx58Q6Q899 Gm26107-201ENSMUST00000083972 107 ntBASIC2.49□□□□□ -2.01
Ddx58Q6Q899 Mir758-201ENSMUST00000103260 81 ntBASIC2.48□□□□□ -2.01
Ddx58Q6Q899 Gm11322-201ENSMUST00000118095 435 ntBASIC2.48□□□□□ -2.01
Ddx58Q6Q899 Gm12721-201ENSMUST00000120621 268 ntBASIC2.48□□□□□ -2.01
Ddx58Q6Q899 Gm23324-201ENSMUST00000157421 131 ntBASIC2.48□□□□□ -2.01
Ddx58Q6Q899 Gm22731-201ENSMUST00000158086 94 ntBASIC2.48□□□□□ -2.01
Ddx58Q6Q899 Mir669n-201ENSMUST00000158636 54 ntBASIC2.48□□□□□ -2.01
Ddx58Q6Q899 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Ddx58Q6Q899 Gm26435-201ENSMUST00000179026 107 ntBASIC2.48□□□□□ -2.01
Ddx58Q6Q899 Gm7258-201ENSMUST00000179317 300 ntBASIC2.48□□□□□ -2.01
Ddx58Q6Q899 Gm27540-201ENSMUST00000184950 187 ntBASIC2.48□□□□□ -2.01
Ddx58Q6Q899 Gm42594-201ENSMUST00000199511 246 ntBASIC2.48□□□□□ -2.01
Ddx58Q6Q899 Gm24460-201ENSMUST00000082731 106 ntBASIC2.48□□□□□ -2.01
Ddx58Q6Q899 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC2.48□□□□□ -2.01
Ddx58Q6Q899 Gm24163-201ENSMUST00000093660 132 ntBASIC2.48□□□□□ -2.01
Ddx58Q6Q899 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Ddx58Q6Q899 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.47□□□□□ -2.01
Ddx58Q6Q899 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
Ddx58Q6Q899 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Ddx58Q6Q899 Gm15215-201ENSMUST00000117773 489 ntBASIC2.47□□□□□ -2.01
Ddx58Q6Q899 Gm13967-201ENSMUST00000120404 380 ntBASIC2.47□□□□□ -2.01
Ddx58Q6Q899 Gm25460-201ENSMUST00000157954 127 ntBASIC2.47□□□□□ -2.01
Ddx58Q6Q899 Gm25397-201ENSMUST00000176951 92 ntBASIC2.47□□□□□ -2.01
Ddx58Q6Q899 Gm18546-201ENSMUST00000197245 676 ntBASIC2.47□□□□□ -2.01
Ddx58Q6Q899 Gm43035-201ENSMUST00000197626 517 ntBASIC2.47□□□□□ -2.01
Ddx58Q6Q899 Mir3961-201ENSMUST00000198795 59 ntBASIC2.47□□□□□ -2.01
Ddx58Q6Q899 Gm42960-201ENSMUST00000202160 241 ntBASIC2.47□□□□□ -2.01
Ddx58Q6Q899 Gm24625-201ENSMUST00000082622 130 ntBASIC2.47□□□□□ -2.01
Ddx58Q6Q899 Mir300-201ENSMUST00000083485 79 ntBASIC2.47□□□□□ -2.01
Ddx58Q6Q899 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Ddx58Q6Q899 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Ddx58Q6Q899 n-R5s158-201ENSMUST00000104095 118 ntBASIC2.46□□□□□ -2.02
Ddx58Q6Q899 Gm24907-201ENSMUST00000116932 128 ntBASIC2.46□□□□□ -2.02
Ddx58Q6Q899 Gm23214-201ENSMUST00000122716 157 ntBASIC2.46□□□□□ -2.02
Ddx58Q6Q899 Gm24478-201ENSMUST00000157439 158 ntBASIC2.46□□□□□ -2.02
Ddx58Q6Q899 Gm24177-201ENSMUST00000158927 131 ntBASIC2.46□□□□□ -2.02
Ddx58Q6Q899 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.46□□□□□ -2.02
Ddx58Q6Q899 Gm44909-201ENSMUST00000208756 165 ntBASIC2.46□□□□□ -2.02
Ddx58Q6Q899 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.46□□□□□ -2.02
Ddx58Q6Q899 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC2.46□□□□□ -2.02
Ddx58Q6Q899 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.45□□□□□ -2.02
Ddx58Q6Q899 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.45□□□□□ -2.02
Ddx58Q6Q899 Gm23015-201ENSMUST00000104145 128 ntBASIC2.45□□□□□ -2.02
Ddx58Q6Q899 Gm23011-201ENSMUST00000104148 132 ntBASIC2.45□□□□□ -2.02
Ddx58Q6Q899 Gm25421-201ENSMUST00000104218 164 ntBASIC2.45□□□□□ -2.02
Ddx58Q6Q899 Gm23109-201ENSMUST00000116867 126 ntBASIC2.45□□□□□ -2.02
Ddx58Q6Q899 Gm22281-201ENSMUST00000157198 103 ntBASIC2.45□□□□□ -2.02
Ddx58Q6Q899 Gm25368-201ENSMUST00000158847 131 ntBASIC2.45□□□□□ -2.02
Ddx58Q6Q899 Gm27793-201ENSMUST00000183405 76 ntBASIC2.45□□□□□ -2.02
Ddx58Q6Q899 Gm20923-201ENSMUST00000190009 319 ntBASIC2.45□□□□□ -2.02
Ddx58Q6Q899 Gm21088-201ENSMUST00000190875 316 ntBASIC2.45□□□□□ -2.02
Ddx58Q6Q899 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.45□□□□□ -2.02
Ddx58Q6Q899 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Ddx58Q6Q899 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Ddx58Q6Q899 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Ddx58Q6Q899 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
Ddx58Q6Q899 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.44□□□□□ -2.02
Ddx58Q6Q899 Mir374b-201ENSMUST00000102314 95 ntBASIC2.44□□□□□ -2.02
Ddx58Q6Q899 Gm22099-201ENSMUST00000157925 123 ntBASIC2.44□□□□□ -2.02
Ddx58Q6Q899 Gm22537-201ENSMUST00000158172 199 ntBASIC2.44□□□□□ -2.02
Ddx58Q6Q899 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC2.44□□□□□ -2.02
Ddx58Q6Q899 Mir7017-201ENSMUST00000184894 62 ntBASIC2.44□□□□□ -2.02
Ddx58Q6Q899 Gm37918-201ENSMUST00000192071 120 ntBASIC2.44□□□□□ -2.02
Ddx58Q6Q899 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC2.44□□□□□ -2.02
Ddx58Q6Q899 Gm45616-201ENSMUST00000211711 319 ntBASIC2.44□□□□□ -2.02
Ddx58Q6Q899 AC145736.2-201ENSMUST00000216305 365 ntBASIC2.44□□□□□ -2.02
Ddx58Q6Q899 Gm22299-201ENSMUST00000082663 136 ntBASIC2.44□□□□□ -2.02
Ddx58Q6Q899 Gm24355-201ENSMUST00000082858 122 ntBASIC2.44□□□□□ -2.02
Ddx58Q6Q899 Mir340-201ENSMUST00000083483 98 ntBASIC2.44□□□□□ -2.02
Ddx58Q6Q899 Gm24164-201ENSMUST00000093663 104 ntBASIC2.44□□□□□ -2.02
Ddx58Q6Q899 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.43□□□□□ -2.02
Ddx58Q6Q899 Gm13588-201ENSMUST00000120026 135 ntBASIC2.43□□□□□ -2.02
Ddx58Q6Q899 Gm15213-201ENSMUST00000122098 216 ntBASIC2.43□□□□□ -2.02
Ddx58Q6Q899 Gm27723-201ENSMUST00000157398 63 ntBASIC2.43□□□□□ -2.02
Ddx58Q6Q899 Gm22215-201ENSMUST00000157558 96 ntBASIC2.43□□□□□ -2.02
Ddx58Q6Q899 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC2.43□□□□□ -2.02
Ddx58Q6Q899 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC2.43□□□□□ -2.02
Ddx58Q6Q899 Gm24390-201ENSMUST00000179578 62 ntBASIC2.43□□□□□ -2.02
Ddx58Q6Q899 Gm28849-201ENSMUST00000188127 174 ntBASIC2.43□□□□□ -2.02
Ddx58Q6Q899 Gm28330-201ENSMUST00000190353 171 ntBASIC2.43□□□□□ -2.02
Ddx58Q6Q899 AC154552.1-201ENSMUST00000222969 202 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 96.6 ms