Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Gm23406-201ENSMUST00000082537 122 ntBASIC2.33□□□□□ -2.04
Smarca1Q6PGB8 Gm23377-201ENSMUST00000082943 126 ntBASIC2.33□□□□□ -2.04
Smarca1Q6PGB8 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Smarca1Q6PGB8 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
Smarca1Q6PGB8 Gm25377-201ENSMUST00000104334 129 ntBASIC2.32□□□□□ -2.04
Smarca1Q6PGB8 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.32□□□□□ -2.04
Smarca1Q6PGB8 Gm20438-201ENSMUST00000174441 329 ntBASIC2.32□□□□□ -2.04
Smarca1Q6PGB8 Gm18546-201ENSMUST00000197245 676 ntBASIC2.32□□□□□ -2.04
Smarca1Q6PGB8 Mir3535-201ENSMUST00000197651 147 ntBASIC2.32□□□□□ -2.04
Smarca1Q6PGB8 Mir3961-201ENSMUST00000198795 59 ntBASIC2.32□□□□□ -2.04
Smarca1Q6PGB8 AC145736.2-201ENSMUST00000216305 365 ntBASIC2.32□□□□□ -2.04
Smarca1Q6PGB8 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC2.32□□□□□ -2.04
Smarca1Q6PGB8 Gm24615-201ENSMUST00000083268 113 ntBASIC2.32□□□□□ -2.04
Smarca1Q6PGB8 Gm22294-201ENSMUST00000083308 104 ntBASIC2.32□□□□□ -2.04
Smarca1Q6PGB8 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Smarca1Q6PGB8 AC102369.2-201ENSMUST00000219725 1679 ntBASIC2.31□□□□□ -2.04
Smarca1Q6PGB8 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
Smarca1Q6PGB8 Gm25460-201ENSMUST00000157954 127 ntBASIC2.31□□□□□ -2.04
Smarca1Q6PGB8 Gm29604-201ENSMUST00000187176 163 ntBASIC2.31□□□□□ -2.04
Smarca1Q6PGB8 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.31□□□□□ -2.04
Smarca1Q6PGB8 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
Smarca1Q6PGB8 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.3□□□□□ -2.04
Smarca1Q6PGB8 Gm6444-201ENSMUST00000119611 458 ntBASIC2.3□□□□□ -2.04
Smarca1Q6PGB8 Gm12924-201ENSMUST00000121747 318 ntBASIC2.3□□□□□ -2.04
Smarca1Q6PGB8 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC2.3□□□□□ -2.04
Smarca1Q6PGB8 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.3□□□□□ -2.04
Smarca1Q6PGB8 Gm24333-201ENSMUST00000175101 84 ntBASIC2.3□□□□□ -2.04
Smarca1Q6PGB8 Gm22510-201ENSMUST00000179304 79 ntBASIC2.3□□□□□ -2.04
Smarca1Q6PGB8 Gm26336-201ENSMUST00000179449 79 ntBASIC2.3□□□□□ -2.04
Smarca1Q6PGB8 Gm26390-201ENSMUST00000179628 79 ntBASIC2.3□□□□□ -2.04
Smarca1Q6PGB8 Gm27905-201ENSMUST00000184005 207 ntBASIC2.3□□□□□ -2.04
Smarca1Q6PGB8 Gm24044-201ENSMUST00000083107 156 ntBASIC2.3□□□□□ -2.04
Smarca1Q6PGB8 Gm25789-201ENSMUST00000083294 76 ntBASIC2.3□□□□□ -2.04
Smarca1Q6PGB8 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.3□□□□□ -2.04
Smarca1Q6PGB8 Gm43706-201ENSMUST00000198767 2652 ntBASIC2.29□□□□□ -2.04
Smarca1Q6PGB8 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Smarca1Q6PGB8 n-R5s158-201ENSMUST00000104095 118 ntBASIC2.29□□□□□ -2.04
Smarca1Q6PGB8 Gm13725-201ENSMUST00000122139 207 ntBASIC2.29□□□□□ -2.04
Smarca1Q6PGB8 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC2.29□□□□□ -2.04
Smarca1Q6PGB8 Gm24355-201ENSMUST00000082858 122 ntBASIC2.29□□□□□ -2.04
Smarca1Q6PGB8 Gm24764-201ENSMUST00000083686 199 ntBASIC2.29□□□□□ -2.04
Smarca1Q6PGB8 Gm24116-201ENSMUST00000103975 107 ntBASIC2.28□□□□□ -2.04
Smarca1Q6PGB8 Gm12143-201ENSMUST00000119666 332 ntBASIC2.28□□□□□ -2.04
Smarca1Q6PGB8 Gm24629-201ENSMUST00000122762 89 ntBASIC2.28□□□□□ -2.04
Smarca1Q6PGB8 Gm25113-201ENSMUST00000157185 143 ntBASIC2.28□□□□□ -2.04
Smarca1Q6PGB8 Gm22281-201ENSMUST00000157198 103 ntBASIC2.28□□□□□ -2.04
Smarca1Q6PGB8 Gm26402-201ENSMUST00000158499 113 ntBASIC2.28□□□□□ -2.04
Smarca1Q6PGB8 Gm24390-201ENSMUST00000179578 62 ntBASIC2.28□□□□□ -2.04
Smarca1Q6PGB8 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC2.28□□□□□ -2.04
Smarca1Q6PGB8 Gm45005-201ENSMUST00000206640 157 ntBASIC2.28□□□□□ -2.04
Smarca1Q6PGB8 Gm44909-201ENSMUST00000208756 165 ntBASIC2.28□□□□□ -2.04
Smarca1Q6PGB8 Gm46997-201ENSMUST00000222108 217 ntBASIC2.28□□□□□ -2.04
Smarca1Q6PGB8 Gm23055-201ENSMUST00000082805 94 ntBASIC2.28□□□□□ -2.04
Smarca1Q6PGB8 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC2.28□□□□□ -2.04
Smarca1Q6PGB8 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC2.28□□□□□ -2.04
Smarca1Q6PGB8 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Smarca1Q6PGB8 AC161250.2-201ENSMUST00000215114 3107 ntBASIC2.27□□□□□ -2.05
Smarca1Q6PGB8 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.27□□□□□ -2.05
Smarca1Q6PGB8 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.27□□□□□ -2.05
Smarca1Q6PGB8 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC2.27□□□□□ -2.05
Smarca1Q6PGB8 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC2.27□□□□□ -2.05
Smarca1Q6PGB8 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC2.27□□□□□ -2.05
Smarca1Q6PGB8 Gm43220-201ENSMUST00000199299 282 ntBASIC2.27□□□□□ -2.05
Smarca1Q6PGB8 Gm42960-201ENSMUST00000202160 241 ntBASIC2.27□□□□□ -2.05
Smarca1Q6PGB8 Gm45456-201ENSMUST00000210841 243 ntBASIC2.27□□□□□ -2.05
Smarca1Q6PGB8 Mir429-201ENSMUST00000083493 83 ntBASIC2.27□□□□□ -2.05
Smarca1Q6PGB8 Gm23941-201ENSMUST00000101953 107 ntBASIC2.26□□□□□ -2.05
Smarca1Q6PGB8 Gm23010-201ENSMUST00000104151 126 ntBASIC2.26□□□□□ -2.05
Smarca1Q6PGB8 Gm24907-201ENSMUST00000116932 128 ntBASIC2.26□□□□□ -2.05
Smarca1Q6PGB8 Gm26150-201ENSMUST00000157426 151 ntBASIC2.26□□□□□ -2.05
Smarca1Q6PGB8 Gm22537-201ENSMUST00000158172 199 ntBASIC2.26□□□□□ -2.05
Smarca1Q6PGB8 Gm23342-201ENSMUST00000158958 115 ntBASIC2.26□□□□□ -2.05
Smarca1Q6PGB8 Gm27540-201ENSMUST00000184950 187 ntBASIC2.26□□□□□ -2.05
Smarca1Q6PGB8 Gm28849-201ENSMUST00000188127 174 ntBASIC2.26□□□□□ -2.05
Smarca1Q6PGB8 Gm28330-201ENSMUST00000190353 171 ntBASIC2.26□□□□□ -2.05
Smarca1Q6PGB8 Snord43-201ENSMUST00000199549 108 ntBASIC2.26□□□□□ -2.05
Smarca1Q6PGB8 Gm45616-201ENSMUST00000211711 319 ntBASIC2.26□□□□□ -2.05
Smarca1Q6PGB8 AC154552.1-201ENSMUST00000222969 202 ntBASIC2.26□□□□□ -2.05
Smarca1Q6PGB8 Gm24163-201ENSMUST00000093660 132 ntBASIC2.26□□□□□ -2.05
Smarca1Q6PGB8 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Smarca1Q6PGB8 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Smarca1Q6PGB8 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2.25□□□□□ -2.05
Smarca1Q6PGB8 Gm13967-201ENSMUST00000120404 380 ntBASIC2.25□□□□□ -2.05
Smarca1Q6PGB8 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.25□□□□□ -2.05
Smarca1Q6PGB8 Trav20-201ENSMUST00000142754 347 ntBASIC2.25□□□□□ -2.05
Smarca1Q6PGB8 Gm22215-201ENSMUST00000157558 96 ntBASIC2.25□□□□□ -2.05
Smarca1Q6PGB8 Gm22727-201ENSMUST00000158090 116 ntBASIC2.25□□□□□ -2.05
Smarca1Q6PGB8 Gm17052-201ENSMUST00000165496 289 ntBASIC2.25□□□□□ -2.05
Smarca1Q6PGB8 Gm23090-201ENSMUST00000177331 78 ntBASIC2.25□□□□□ -2.05
Smarca1Q6PGB8 Gm26435-201ENSMUST00000179026 107 ntBASIC2.25□□□□□ -2.05
Smarca1Q6PGB8 Mir7016-201ENSMUST00000184308 72 ntBASIC2.25□□□□□ -2.05
Smarca1Q6PGB8 Gm37918-201ENSMUST00000192071 120 ntBASIC2.25□□□□□ -2.05
Smarca1Q6PGB8 Gm32175-201ENSMUST00000193641 346 ntBASIC2.25□□□□□ -2.05
Smarca1Q6PGB8 Gm42834-201ENSMUST00000196845 256 ntBASIC2.25□□□□□ -2.05
Smarca1Q6PGB8 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC2.25□□□□□ -2.05
Smarca1Q6PGB8 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.25□□□□□ -2.05
Smarca1Q6PGB8 AC167140.1-201ENSMUST00000224710 403 ntBASIC2.25□□□□□ -2.05
Smarca1Q6PGB8 Gm26447-201ENSMUST00000082448 129 ntBASIC2.25□□□□□ -2.05
Smarca1Q6PGB8 Mir151-201ENSMUST00000083678 68 ntBASIC2.25□□□□□ -2.05
Smarca1Q6PGB8 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 204.7 ms