Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm24510-201ENSMUST00000174965 94 ntBASIC2.61□□□□□ -1.99
Rnf220Q6PDX6 Gm25996-201ENSMUST00000175393 117 ntBASIC2.61□□□□□ -1.99
Rnf220Q6PDX6 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Rnf220Q6PDX6 Gm29014-201ENSMUST00000191422 326 ntBASIC2.61□□□□□ -1.99
Rnf220Q6PDX6 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.61□□□□□ -1.99
Rnf220Q6PDX6 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Rnf220Q6PDX6 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.61□□□□□ -1.99
Rnf220Q6PDX6 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
Rnf220Q6PDX6 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Rnf220Q6PDX6 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Rnf220Q6PDX6 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Rnf220Q6PDX6 Gm22590-201ENSMUST00000104247 128 ntBASIC2.6□□□□□ -1.99
Rnf220Q6PDX6 Defa-ps5-201ENSMUST00000121541 279 ntBASIC2.6□□□□□ -1.99
Rnf220Q6PDX6 Gm26279-201ENSMUST00000157095 102 ntBASIC2.6□□□□□ -1.99
Rnf220Q6PDX6 Gm22792-201ENSMUST00000157225 133 ntBASIC2.6□□□□□ -1.99
Rnf220Q6PDX6 Gm22731-201ENSMUST00000158086 94 ntBASIC2.6□□□□□ -1.99
Rnf220Q6PDX6 Gm25491-201ENSMUST00000158733 308 ntBASIC2.6□□□□□ -1.99
Rnf220Q6PDX6 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC2.6□□□□□ -1.99
Rnf220Q6PDX6 Gm28591-201ENSMUST00000185259 183 ntBASIC2.6□□□□□ -1.99
Rnf220Q6PDX6 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Rnf220Q6PDX6 Igkv1-115-201ENSMUST00000198714 302 ntBASIC2.6□□□□□ -1.99
Rnf220Q6PDX6 Gm36776-201ENSMUST00000207006 203 ntBASIC2.6□□□□□ -1.99
Rnf220Q6PDX6 Gm44964-201ENSMUST00000207011 273 ntBASIC2.6□□□□□ -1.99
Rnf220Q6PDX6 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC2.6□□□□□ -1.99
Rnf220Q6PDX6 Gm26225-201ENSMUST00000082508 135 ntBASIC2.6□□□□□ -1.99
Rnf220Q6PDX6 n-R5s166-201ENSMUST00000082898 121 ntBASIC2.6□□□□□ -1.99
Rnf220Q6PDX6 Gm42862-201ENSMUST00000197494 2621 ntBASIC2.59□□□□□ -1.99
Rnf220Q6PDX6 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Rnf220Q6PDX6 Mir466h-201ENSMUST00000104748 81 ntBASIC2.59□□□□□ -1.99
Rnf220Q6PDX6 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.59□□□□□ -1.99
Rnf220Q6PDX6 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC2.59□□□□□ -1.99
Rnf220Q6PDX6 Gm22330-201ENSMUST00000158068 115 ntBASIC2.59□□□□□ -1.99
Rnf220Q6PDX6 Gm23182-201ENSMUST00000158688 135 ntBASIC2.59□□□□□ -1.99
Rnf220Q6PDX6 Gm17166-201ENSMUST00000172006 431 ntBASIC2.59□□□□□ -1.99
Rnf220Q6PDX6 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2.59□□□□□ -1.99
Rnf220Q6PDX6 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC2.59□□□□□ -1.99
Rnf220Q6PDX6 Igkv8-31-201ENSMUST00000200040 372 ntBASIC2.59□□□□□ -1.99
Rnf220Q6PDX6 Gm32381-201ENSMUST00000203192 476 ntBASIC2.59□□□□□ -1.99
Rnf220Q6PDX6 Gm43932-201ENSMUST00000204499 52 ntBASIC2.59□□□□□ -1.99
Rnf220Q6PDX6 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
Rnf220Q6PDX6 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Rnf220Q6PDX6 AC153964.2-201ENSMUST00000217704 2474 ntBASIC2.58□□□□□ -2
Rnf220Q6PDX6 Gm43879-201ENSMUST00000203811 3760 ntBASIC2.58□□□□□ -2
Rnf220Q6PDX6 Gm25834-201ENSMUST00000158916 101 ntBASIC2.58□□□□□ -2
Rnf220Q6PDX6 Gm22510-201ENSMUST00000179304 79 ntBASIC2.58□□□□□ -2
Rnf220Q6PDX6 Gm26336-201ENSMUST00000179449 79 ntBASIC2.58□□□□□ -2
Rnf220Q6PDX6 Gm26390-201ENSMUST00000179628 79 ntBASIC2.58□□□□□ -2
Rnf220Q6PDX6 Gm23571-201ENSMUST00000180073 127 ntBASIC2.58□□□□□ -2
Rnf220Q6PDX6 Gm27585-201ENSMUST00000183717 199 ntBASIC2.58□□□□□ -2
Rnf220Q6PDX6 Gm28314-201ENSMUST00000191276 345 ntBASIC2.58□□□□□ -2
Rnf220Q6PDX6 AC122242.1-201ENSMUST00000224650 304 ntBASIC2.58□□□□□ -2
Rnf220Q6PDX6 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.58□□□□□ -2
Rnf220Q6PDX6 Gm24457-201ENSMUST00000083196 105 ntBASIC2.58□□□□□ -2
Rnf220Q6PDX6 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Rnf220Q6PDX6 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
Rnf220Q6PDX6 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.57□□□□□ -2
Rnf220Q6PDX6 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.57□□□□□ -2
Rnf220Q6PDX6 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
Rnf220Q6PDX6 Gm24280-201ENSMUST00000104237 134 ntBASIC2.57□□□□□ -2
Rnf220Q6PDX6 Gm24403-201ENSMUST00000104616 130 ntBASIC2.57□□□□□ -2
Rnf220Q6PDX6 Gm14748-201ENSMUST00000119819 411 ntBASIC2.57□□□□□ -2
Rnf220Q6PDX6 Gm23980-201ENSMUST00000157135 158 ntBASIC2.57□□□□□ -2
Rnf220Q6PDX6 Gm23101-201ENSMUST00000157550 137 ntBASIC2.57□□□□□ -2
Rnf220Q6PDX6 Gm25977-201ENSMUST00000158697 85 ntBASIC2.57□□□□□ -2
Rnf220Q6PDX6 Gm16162-201ENSMUST00000162296 297 ntBASIC2.57□□□□□ -2
Rnf220Q6PDX6 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC2.57□□□□□ -2
Rnf220Q6PDX6 Mir7047-201ENSMUST00000184595 64 ntBASIC2.57□□□□□ -2
Rnf220Q6PDX6 Gm37081-201ENSMUST00000192034 196 ntBASIC2.57□□□□□ -2
Rnf220Q6PDX6 Gm34139-201ENSMUST00000196166 294 ntBASIC2.57□□□□□ -2
Rnf220Q6PDX6 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC2.57□□□□□ -2
Rnf220Q6PDX6 Gm44555-201ENSMUST00000209008 148 ntBASIC2.57□□□□□ -2
Rnf220Q6PDX6 Gm25401-201ENSMUST00000082975 106 ntBASIC2.57□□□□□ -2
Rnf220Q6PDX6 Gm23264-201ENSMUST00000083372 107 ntBASIC2.57□□□□□ -2
Rnf220Q6PDX6 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Rnf220Q6PDX6 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Rnf220Q6PDX6 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
Rnf220Q6PDX6 Gm13797-201ENSMUST00000121792 120 ntBASIC2.56□□□□□ -2
Rnf220Q6PDX6 Gm26150-201ENSMUST00000157426 151 ntBASIC2.56□□□□□ -2
Rnf220Q6PDX6 Gm23667-201ENSMUST00000157466 120 ntBASIC2.56□□□□□ -2
Rnf220Q6PDX6 Gm23090-201ENSMUST00000177331 78 ntBASIC2.56□□□□□ -2
Rnf220Q6PDX6 Gm28169-201ENSMUST00000190342 345 ntBASIC2.56□□□□□ -2
Rnf220Q6PDX6 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.56□□□□□ -2
Rnf220Q6PDX6 Gm43626-201ENSMUST00000198575 162 ntBASIC2.56□□□□□ -2
Rnf220Q6PDX6 AC125167.1-201ENSMUST00000198698 141 ntBASIC2.56□□□□□ -2
Rnf220Q6PDX6 AC161250.2-201ENSMUST00000215114 3107 ntBASIC2.56□□□□□ -2
Rnf220Q6PDX6 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Rnf220Q6PDX6 Gm13913-201ENSMUST00000121126 260 ntBASIC2.55□□□□□ -2
Rnf220Q6PDX6 Gm23325-201ENSMUST00000157422 129 ntBASIC2.55□□□□□ -2
Rnf220Q6PDX6 Gm24314-201ENSMUST00000158274 123 ntBASIC2.55□□□□□ -2
Rnf220Q6PDX6 Gm44491-201ENSMUST00000196794 96 ntBASIC2.55□□□□□ -2
Rnf220Q6PDX6 Gm6105-201ENSMUST00000200580 624 ntBASIC2.55□□□□□ -2
Rnf220Q6PDX6 Gm45791-201ENSMUST00000212908 352 ntBASIC2.55□□□□□ -2
Rnf220Q6PDX6 Snord104-201ENSMUST00000083192 70 ntBASIC2.55□□□□□ -2
Rnf220Q6PDX6 Mir384-201ENSMUST00000083565 88 ntBASIC2.55□□□□□ -2
Rnf220Q6PDX6 Mir146-201ENSMUST00000083667 65 ntBASIC2.55□□□□□ -2
Rnf220Q6PDX6 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.55□□□□□ -2
Rnf220Q6PDX6 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Rnf220Q6PDX6 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2.54□□□□□ -2
Rnf220Q6PDX6 Gm15861-201ENSMUST00000120979 339 ntBASIC2.54□□□□□ -2
Rnf220Q6PDX6 Gm23168-201ENSMUST00000157156 143 ntBASIC2.54□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 145.7 ms