Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Gm26390-201ENSMUST00000179628 79 ntBASIC1.72□□□□□ -2.13
Rtl3Q6P1Y1 Gm26200-201ENSMUST00000180273 79 ntBASIC1.72□□□□□ -2.13
Rtl3Q6P1Y1 Gm27511-201ENSMUST00000183502 127 ntBASIC1.72□□□□□ -2.13
Rtl3Q6P1Y1 Gm28794-201ENSMUST00000185276 136 ntBASIC1.72□□□□□ -2.13
Rtl3Q6P1Y1 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.72□□□□□ -2.13
Rtl3Q6P1Y1 Snord42a-201ENSMUST00000082606 65 ntBASIC1.72□□□□□ -2.13
Rtl3Q6P1Y1 Gm24152-201ENSMUST00000082764 163 ntBASIC1.72□□□□□ -2.13
Rtl3Q6P1Y1 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Rtl3Q6P1Y1 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
Rtl3Q6P1Y1 Gm10033-201ENSMUST00000072427 1813 ntBASIC1.71□□□□□ -2.14
Rtl3Q6P1Y1 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Rtl3Q6P1Y1 Gm12417-201ENSMUST00000119153 403 ntBASIC1.71□□□□□ -2.14
Rtl3Q6P1Y1 Gm23181-201ENSMUST00000158685 110 ntBASIC1.71□□□□□ -2.14
Rtl3Q6P1Y1 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC1.71□□□□□ -2.14
Rtl3Q6P1Y1 Gm28383-201ENSMUST00000187563 139 ntBASIC1.71□□□□□ -2.14
Rtl3Q6P1Y1 Gm29262-201ENSMUST00000190084 196 ntBASIC1.71□□□□□ -2.14
Rtl3Q6P1Y1 Gm36891-201ENSMUST00000191995 655 ntBASIC1.71□□□□□ -2.14
Rtl3Q6P1Y1 Gm44654-201ENSMUST00000208052 329 ntBASIC1.71□□□□□ -2.14
Rtl3Q6P1Y1 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC1.71□□□□□ -2.14
Rtl3Q6P1Y1 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC1.71□□□□□ -2.14
Rtl3Q6P1Y1 Mir374b-201ENSMUST00000102314 95 ntBASIC1.7□□□□□ -2.14
Rtl3Q6P1Y1 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Rtl3Q6P1Y1 Gm25068-201ENSMUST00000103895 110 ntBASIC1.7□□□□□ -2.14
Rtl3Q6P1Y1 Gm22032-201ENSMUST00000116946 116 ntBASIC1.7□□□□□ -2.14
Rtl3Q6P1Y1 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.7□□□□□ -2.14
Rtl3Q6P1Y1 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.7□□□□□ -2.14
Rtl3Q6P1Y1 Gm22843-201ENSMUST00000157710 134 ntBASIC1.7□□□□□ -2.14
Rtl3Q6P1Y1 Gm22075-201ENSMUST00000158599 192 ntBASIC1.7□□□□□ -2.14
Rtl3Q6P1Y1 Gm24390-201ENSMUST00000179578 62 ntBASIC1.7□□□□□ -2.14
Rtl3Q6P1Y1 Gm26968-201ENSMUST00000182894 481 ntBASIC1.7□□□□□ -2.14
Rtl3Q6P1Y1 Mir7683-201ENSMUST00000183842 61 ntBASIC1.7□□□□□ -2.14
Rtl3Q6P1Y1 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC1.7□□□□□ -2.14
Rtl3Q6P1Y1 Gm18433-201ENSMUST00000192747 197 ntBASIC1.7□□□□□ -2.14
Rtl3Q6P1Y1 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.7□□□□□ -2.14
Rtl3Q6P1Y1 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.7□□□□□ -2.14
Rtl3Q6P1Y1 Gm24615-201ENSMUST00000083268 113 ntBASIC1.7□□□□□ -2.14
Rtl3Q6P1Y1 Gm4746-201ENSMUST00000120395 2406 ntBASIC1.7□□□□□ -2.14
Rtl3Q6P1Y1 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Rtl3Q6P1Y1 Gm11854-201ENSMUST00000117839 446 ntBASIC1.69□□□□□ -2.14
Rtl3Q6P1Y1 Gm11862-201ENSMUST00000119678 659 ntBASIC1.69□□□□□ -2.14
Rtl3Q6P1Y1 Gm14782-201ENSMUST00000120151 195 ntBASIC1.69□□□□□ -2.14
Rtl3Q6P1Y1 Gm12785-201ENSMUST00000122052 172 ntBASIC1.69□□□□□ -2.14
Rtl3Q6P1Y1 Gm16162-201ENSMUST00000162296 297 ntBASIC1.69□□□□□ -2.14
Rtl3Q6P1Y1 Gm23967-201ENSMUST00000175062 78 ntBASIC1.69□□□□□ -2.14
Rtl3Q6P1Y1 Gm23267-201ENSMUST00000178490 132 ntBASIC1.69□□□□□ -2.14
Rtl3Q6P1Y1 Mir6388-201ENSMUST00000184417 75 ntBASIC1.69□□□□□ -2.14
Rtl3Q6P1Y1 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC1.69□□□□□ -2.14
Rtl3Q6P1Y1 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Rtl3Q6P1Y1 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.69□□□□□ -2.14
Rtl3Q6P1Y1 Gm22021-201ENSMUST00000104353 107 ntBASIC1.68□□□□□ -2.14
Rtl3Q6P1Y1 Mir3096-201ENSMUST00000116685 71 ntBASIC1.68□□□□□ -2.14
Rtl3Q6P1Y1 Gm14882-201ENSMUST00000117216 218 ntBASIC1.68□□□□□ -2.14
Rtl3Q6P1Y1 Gm26181-201ENSMUST00000157687 106 ntBASIC1.68□□□□□ -2.14
Rtl3Q6P1Y1 Gm25333-201ENSMUST00000158035 246 ntBASIC1.68□□□□□ -2.14
Rtl3Q6P1Y1 Mir1936-201ENSMUST00000158699 93 ntBASIC1.68□□□□□ -2.14
Rtl3Q6P1Y1 Gm25671-201ENSMUST00000178612 105 ntBASIC1.68□□□□□ -2.14
Rtl3Q6P1Y1 Gm25730-201ENSMUST00000178753 165 ntBASIC1.68□□□□□ -2.14
Rtl3Q6P1Y1 Gm23307-201ENSMUST00000179167 105 ntBASIC1.68□□□□□ -2.14
Rtl3Q6P1Y1 Gm25286-201ENSMUST00000179790 105 ntBASIC1.68□□□□□ -2.14
Rtl3Q6P1Y1 Gm25253-201ENSMUST00000179958 107 ntBASIC1.68□□□□□ -2.14
Rtl3Q6P1Y1 Gm27271-201ENSMUST00000183509 170 ntBASIC1.68□□□□□ -2.14
Rtl3Q6P1Y1 AC109214.2-201ENSMUST00000220089 358 ntBASIC1.68□□□□□ -2.14
Rtl3Q6P1Y1 AC192333.1-201ENSMUST00000224573 376 ntBASIC1.68□□□□□ -2.14
Rtl3Q6P1Y1 AC154747.1-201ENSMUST00000225265 239 ntBASIC1.68□□□□□ -2.14
Rtl3Q6P1Y1 Gm5899-201ENSMUST00000071770 270 ntBASIC1.68□□□□□ -2.14
Rtl3Q6P1Y1 Gm24356-201ENSMUST00000082859 106 ntBASIC1.68□□□□□ -2.14
Rtl3Q6P1Y1 Gm26329-201ENSMUST00000093723 110 ntBASIC1.68□□□□□ -2.14
Rtl3Q6P1Y1 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.68□□□□□ -2.14
Rtl3Q6P1Y1 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Rtl3Q6P1Y1 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Rtl3Q6P1Y1 Gm13992-201ENSMUST00000120558 156 ntBASIC1.67□□□□□ -2.14
Rtl3Q6P1Y1 Gm25805-201ENSMUST00000122788 108 ntBASIC1.67□□□□□ -2.14
Rtl3Q6P1Y1 Gm26150-201ENSMUST00000157426 151 ntBASIC1.67□□□□□ -2.14
Rtl3Q6P1Y1 Gm24851-201ENSMUST00000158028 103 ntBASIC1.67□□□□□ -2.14
Rtl3Q6P1Y1 Gm24902-201ENSMUST00000158126 123 ntBASIC1.67□□□□□ -2.14
Rtl3Q6P1Y1 Gm23854-201ENSMUST00000158378 108 ntBASIC1.67□□□□□ -2.14
Rtl3Q6P1Y1 Gm26405-201ENSMUST00000158495 100 ntBASIC1.67□□□□□ -2.14
Rtl3Q6P1Y1 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.67□□□□□ -2.14
Rtl3Q6P1Y1 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.67□□□□□ -2.14
Rtl3Q6P1Y1 Gm17067-202ENSMUST00000180131 123 ntBASIC1.67□□□□□ -2.14
Rtl3Q6P1Y1 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC1.67□□□□□ -2.14
Rtl3Q6P1Y1 Gm28288-201ENSMUST00000191019 214 ntBASIC1.67□□□□□ -2.14
Rtl3Q6P1Y1 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.67□□□□□ -2.14
Rtl3Q6P1Y1 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.67□□□□□ -2.14
Rtl3Q6P1Y1 Gm24165-201ENSMUST00000082718 128 ntBASIC1.67□□□□□ -2.14
Rtl3Q6P1Y1 Gm24406-201ENSMUST00000083026 128 ntBASIC1.67□□□□□ -2.14
Rtl3Q6P1Y1 Mir32-201ENSMUST00000083610 70 ntBASIC1.67□□□□□ -2.14
Rtl3Q6P1Y1 Gm25937-201ENSMUST00000083912 107 ntBASIC1.67□□□□□ -2.14
Rtl3Q6P1Y1 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Rtl3Q6P1Y1 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Rtl3Q6P1Y1 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Rtl3Q6P1Y1 Gm15526-201ENSMUST00000112504 204 ntBASIC1.66□□□□□ -2.14
Rtl3Q6P1Y1 Gm14307-201ENSMUST00000118930 291 ntBASIC1.66□□□□□ -2.14
Rtl3Q6P1Y1 Gm15861-201ENSMUST00000120979 339 ntBASIC1.66□□□□□ -2.14
Rtl3Q6P1Y1 Gm14297-201ENSMUST00000129110 291 ntBASIC1.66□□□□□ -2.14
Rtl3Q6P1Y1 Gm16362-201ENSMUST00000135189 214 ntBASIC1.66□□□□□ -2.14
Rtl3Q6P1Y1 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Rtl3Q6P1Y1 Gm16358-201ENSMUST00000146046 210 ntBASIC1.66□□□□□ -2.14
Rtl3Q6P1Y1 Gm23779-201ENSMUST00000157938 64 ntBASIC1.66□□□□□ -2.14
Rtl3Q6P1Y1 Gm22945-201ENSMUST00000158557 157 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms