Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm14402-201ENSMUST00000122217 508 ntBASIC2.55□□□□□ -2
CtcfQ61164 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.55□□□□□ -2
CtcfQ61164 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.55□□□□□ -2
CtcfQ61164 Gm24750-201ENSMUST00000157843 104 ntBASIC2.55□□□□□ -2
CtcfQ61164 Gm23642-201ENSMUST00000157858 258 ntBASIC2.55□□□□□ -2
CtcfQ61164 Gm23640-201ENSMUST00000157860 104 ntBASIC2.55□□□□□ -2
CtcfQ61164 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CtcfQ61164 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.55□□□□□ -2
CtcfQ61164 Gm28849-201ENSMUST00000188127 174 ntBASIC2.55□□□□□ -2
CtcfQ61164 Gm28330-201ENSMUST00000190353 171 ntBASIC2.55□□□□□ -2
CtcfQ61164 Gm37923-201ENSMUST00000191624 161 ntBASIC2.55□□□□□ -2
CtcfQ61164 Mir378a-201ENSMUST00000198300 66 ntBASIC2.55□□□□□ -2
CtcfQ61164 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC2.55□□□□□ -2
CtcfQ61164 Gm45013-201ENSMUST00000206883 178 ntBASIC2.55□□□□□ -2
CtcfQ61164 Gm23453-201ENSMUST00000083326 106 ntBASIC2.55□□□□□ -2
CtcfQ61164 Gm24121-201ENSMUST00000102029 106 ntBASIC2.54□□□□□ -2
CtcfQ61164 Gm22784-201ENSMUST00000104088 132 ntBASIC2.54□□□□□ -2
CtcfQ61164 Gm23653-201ENSMUST00000116751 97 ntBASIC2.54□□□□□ -2
CtcfQ61164 Gm12797-201ENSMUST00000118645 273 ntBASIC2.54□□□□□ -2
CtcfQ61164 Gm25153-201ENSMUST00000157118 156 ntBASIC2.54□□□□□ -2
CtcfQ61164 Gm24922-201ENSMUST00000158511 102 ntBASIC2.54□□□□□ -2
CtcfQ61164 Gm25069-201ENSMUST00000175238 86 ntBASIC2.54□□□□□ -2
CtcfQ61164 Gm22118-201ENSMUST00000175593 171 ntBASIC2.54□□□□□ -2
CtcfQ61164 Gm27379-201ENSMUST00000183730 123 ntBASIC2.54□□□□□ -2
CtcfQ61164 Gm28627-201ENSMUST00000186141 453 ntBASIC2.54□□□□□ -2
CtcfQ61164 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.54□□□□□ -2
CtcfQ61164 AC115735.2-201ENSMUST00000227135 351 ntBASIC2.54□□□□□ -2
CtcfQ61164 Gm22973-201ENSMUST00000083298 191 ntBASIC2.54□□□□□ -2
CtcfQ61164 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.54□□□□□ -2
CtcfQ61164 Mir423-201ENSMUST00000083584 109 ntBASIC2.54□□□□□ -2
CtcfQ61164 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.53□□□□□ -2
CtcfQ61164 Gm23951-201ENSMUST00000104029 132 ntBASIC2.53□□□□□ -2
CtcfQ61164 Gm27396-201ENSMUST00000157708 58 ntBASIC2.53□□□□□ -2
CtcfQ61164 Gm22483-201ENSMUST00000157986 274 ntBASIC2.53□□□□□ -2
CtcfQ61164 Gm24392-201ENSMUST00000158136 103 ntBASIC2.53□□□□□ -2
CtcfQ61164 Gm25654-201ENSMUST00000158467 88 ntBASIC2.53□□□□□ -2
CtcfQ61164 Gm24769-201ENSMUST00000158506 129 ntBASIC2.53□□□□□ -2
CtcfQ61164 Gm25488-201ENSMUST00000158728 118 ntBASIC2.53□□□□□ -2
CtcfQ61164 Gm24667-201ENSMUST00000158938 103 ntBASIC2.53□□□□□ -2
CtcfQ61164 Gm25642-201ENSMUST00000175137 66 ntBASIC2.53□□□□□ -2
CtcfQ61164 Gm27421-201ENSMUST00000184729 167 ntBASIC2.53□□□□□ -2
CtcfQ61164 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC2.53□□□□□ -2
CtcfQ61164 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2.53□□□□□ -2
CtcfQ61164 Gm44533-201ENSMUST00000207782 268 ntBASIC2.53□□□□□ -2
CtcfQ61164 Gm45002-201ENSMUST00000208045 120 ntBASIC2.53□□□□□ -2
CtcfQ61164 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC2.53□□□□□ -2
CtcfQ61164 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.53□□□□□ -2
CtcfQ61164 Mir181b-2-201ENSMUST00000083644 89 ntBASIC2.53□□□□□ -2
CtcfQ61164 Gm14652-201ENSMUST00000118479 235 ntBASIC2.52□□□□□ -2.01
CtcfQ61164 Gm13432-201ENSMUST00000118861 241 ntBASIC2.52□□□□□ -2.01
CtcfQ61164 Gm13992-201ENSMUST00000120558 156 ntBASIC2.52□□□□□ -2.01
CtcfQ61164 Gm23230-201ENSMUST00000157298 133 ntBASIC2.52□□□□□ -2.01
CtcfQ61164 Gm24726-201ENSMUST00000158232 121 ntBASIC2.52□□□□□ -2.01
CtcfQ61164 Gm22947-201ENSMUST00000158559 91 ntBASIC2.52□□□□□ -2.01
CtcfQ61164 Gm22450-201ENSMUST00000179641 107 ntBASIC2.52□□□□□ -2.01
CtcfQ61164 Gm25473-201ENSMUST00000180191 107 ntBASIC2.52□□□□□ -2.01
CtcfQ61164 Gm27220-201ENSMUST00000183453 262 ntBASIC2.52□□□□□ -2.01
CtcfQ61164 Mir6540-201ENSMUST00000184886 108 ntBASIC2.52□□□□□ -2.01
CtcfQ61164 Gm19123-201ENSMUST00000190716 651 ntBASIC2.52□□□□□ -2.01
CtcfQ61164 Gm40810-201ENSMUST00000219149 253 ntBASIC2.52□□□□□ -2.01
CtcfQ61164 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.52□□□□□ -2.01
CtcfQ61164 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.52□□□□□ -2.01
CtcfQ61164 Gm10092-201ENSMUST00000077110 180 ntBASIC2.52□□□□□ -2.01
CtcfQ61164 Gm24856-201ENSMUST00000082809 107 ntBASIC2.52□□□□□ -2.01
CtcfQ61164 Gm24044-201ENSMUST00000083107 156 ntBASIC2.52□□□□□ -2.01
CtcfQ61164 Gm26071-201ENSMUST00000083261 107 ntBASIC2.52□□□□□ -2.01
CtcfQ61164 Gm24521-201ENSMUST00000083958 107 ntBASIC2.52□□□□□ -2.01
CtcfQ61164 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.52□□□□□ -2.01
CtcfQ61164 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
CtcfQ61164 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.52□□□□□ -2.01
CtcfQ61164 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
CtcfQ61164 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.51□□□□□ -2.01
CtcfQ61164 Gm13756-201ENSMUST00000117618 222 ntBASIC2.51□□□□□ -2.01
CtcfQ61164 Gm12443-201ENSMUST00000122308 323 ntBASIC2.51□□□□□ -2.01
CtcfQ61164 Gm25720-201ENSMUST00000157503 105 ntBASIC2.51□□□□□ -2.01
CtcfQ61164 Gm28020-201ENSMUST00000157739 67 ntBASIC2.51□□□□□ -2.01
CtcfQ61164 Gm22535-201ENSMUST00000158174 119 ntBASIC2.51□□□□□ -2.01
CtcfQ61164 Gm25866-201ENSMUST00000158245 112 ntBASIC2.51□□□□□ -2.01
CtcfQ61164 Gm24799-201ENSMUST00000178431 79 ntBASIC2.51□□□□□ -2.01
CtcfQ61164 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC2.51□□□□□ -2.01
CtcfQ61164 Gm29022-201ENSMUST00000190702 225 ntBASIC2.51□□□□□ -2.01
CtcfQ61164 Gm44337-201ENSMUST00000196553 114 ntBASIC2.51□□□□□ -2.01
CtcfQ61164 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC2.51□□□□□ -2.01
CtcfQ61164 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CtcfQ61164 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CtcfQ61164 Gm14215-201ENSMUST00000120578 221 ntBASIC2.5□□□□□ -2.01
CtcfQ61164 Gm13913-201ENSMUST00000121126 260 ntBASIC2.5□□□□□ -2.01
CtcfQ61164 Gm25783-201ENSMUST00000122525 190 ntBASIC2.5□□□□□ -2.01
CtcfQ61164 Gm25543-201ENSMUST00000122678 312 ntBASIC2.5□□□□□ -2.01
CtcfQ61164 Gm16326-201ENSMUST00000162843 414 ntBASIC2.5□□□□□ -2.01
CtcfQ61164 Gm23002-201ENSMUST00000179221 107 ntBASIC2.5□□□□□ -2.01
CtcfQ61164 Gm25024-201ENSMUST00000179667 104 ntBASIC2.5□□□□□ -2.01
CtcfQ61164 Gm28848-201ENSMUST00000189984 168 ntBASIC2.5□□□□□ -2.01
CtcfQ61164 Gm44490-201ENSMUST00000198566 127 ntBASIC2.5□□□□□ -2.01
CtcfQ61164 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CtcfQ61164 Gm24152-201ENSMUST00000082764 163 ntBASIC2.5□□□□□ -2.01
CtcfQ61164 Gm22622-201ENSMUST00000082870 129 ntBASIC2.5□□□□□ -2.01
CtcfQ61164 Gm26265-201ENSMUST00000083277 135 ntBASIC2.5□□□□□ -2.01
CtcfQ61164 Gm22294-201ENSMUST00000083308 104 ntBASIC2.5□□□□□ -2.01
CtcfQ61164 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC2.5□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms