Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 AC121844.2-201ENSMUST00000219067 2066 ntBASIC1.38□□□□□ -2.19
Usf1Q61069 Gm11862-201ENSMUST00000119678 659 ntBASIC1.37□□□□□ -2.19
Usf1Q61069 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC1.37□□□□□ -2.19
Usf1Q61069 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
Usf1Q61069 Gm23535-201ENSMUST00000157542 106 ntBASIC1.37□□□□□ -2.19
Usf1Q61069 Rnu7-201ENSMUST00000158458 62 ntBASIC1.37□□□□□ -2.19
Usf1Q61069 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
Usf1Q61069 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.37□□□□□ -2.19
Usf1Q61069 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.37□□□□□ -2.19
Usf1Q61069 Gm26200-201ENSMUST00000180273 79 ntBASIC1.37□□□□□ -2.19
Usf1Q61069 Gm27265-201ENSMUST00000183559 77 ntBASIC1.37□□□□□ -2.19
Usf1Q61069 Gm27493-201ENSMUST00000184128 78 ntBASIC1.37□□□□□ -2.19
Usf1Q61069 Gm43993-201ENSMUST00000203972 247 ntBASIC1.37□□□□□ -2.19
Usf1Q61069 Gm44010-201ENSMUST00000204432 331 ntBASIC1.37□□□□□ -2.19
Usf1Q61069 AC164161.1-201ENSMUST00000214076 639 ntBASIC1.37□□□□□ -2.19
Usf1Q61069 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.37□□□□□ -2.19
Usf1Q61069 Gm24624-201ENSMUST00000082617 164 ntBASIC1.37□□□□□ -2.19
Usf1Q61069 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.37□□□□□ -2.19
Usf1Q61069 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
Usf1Q61069 Gm14296-202ENSMUST00000108931 750 ntBASIC1.36□□□□□ -2.19
Usf1Q61069 Gm13396-201ENSMUST00000120617 271 ntBASIC1.36□□□□□ -2.19
Usf1Q61069 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.36□□□□□ -2.19
Usf1Q61069 Gm25909-201ENSMUST00000157619 121 ntBASIC1.36□□□□□ -2.19
Usf1Q61069 Gm24853-201ENSMUST00000158026 121 ntBASIC1.36□□□□□ -2.19
Usf1Q61069 Gm25371-201ENSMUST00000158162 101 ntBASIC1.36□□□□□ -2.19
Usf1Q61069 Gm23760-201ENSMUST00000158350 116 ntBASIC1.36□□□□□ -2.19
Usf1Q61069 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC1.36□□□□□ -2.19
Usf1Q61069 Gm24308-201ENSMUST00000177773 114 ntBASIC1.36□□□□□ -2.19
Usf1Q61069 Gm28995-201ENSMUST00000186625 261 ntBASIC1.36□□□□□ -2.19
Usf1Q61069 Gm37337-201ENSMUST00000192601 993 ntBASIC1.36□□□□□ -2.19
Usf1Q61069 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
Usf1Q61069 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC1.36□□□□□ -2.19
Usf1Q61069 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.36□□□□□ -2.19
Usf1Q61069 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
Usf1Q61069 Gm6025-201ENSMUST00000121517 201 ntBASIC1.35□□□□□ -2.19
Usf1Q61069 Gm6956-201ENSMUST00000134724 546 ntBASIC1.35□□□□□ -2.19
Usf1Q61069 Gm23328-201ENSMUST00000157418 132 ntBASIC1.35□□□□□ -2.19
Usf1Q61069 Gm22082-201ENSMUST00000157587 161 ntBASIC1.35□□□□□ -2.19
Usf1Q61069 Gm28257-201ENSMUST00000185244 463 ntBASIC1.35□□□□□ -2.19
Usf1Q61069 Gm28927-201ENSMUST00000191528 272 ntBASIC1.35□□□□□ -2.19
Usf1Q61069 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.35□□□□□ -2.19
Usf1Q61069 CT025603.4-201ENSMUST00000225777 413 ntBASIC1.35□□□□□ -2.19
Usf1Q61069 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.35□□□□□ -2.19
Usf1Q61069 Gm23721-201ENSMUST00000083005 107 ntBASIC1.35□□□□□ -2.19
Usf1Q61069 Gm9059-201ENSMUST00000118319 183 ntBASIC1.34□□□□□ -2.19
Usf1Q61069 Mir1936-201ENSMUST00000158699 93 ntBASIC1.34□□□□□ -2.19
Usf1Q61069 Gm24799-201ENSMUST00000178431 79 ntBASIC1.34□□□□□ -2.19
Usf1Q61069 Gm26435-201ENSMUST00000179026 107 ntBASIC1.34□□□□□ -2.19
Usf1Q61069 Mir6419-201ENSMUST00000184784 113 ntBASIC1.34□□□□□ -2.19
Usf1Q61069 Gm18291-201ENSMUST00000190791 301 ntBASIC1.34□□□□□ -2.19
Usf1Q61069 Gm44491-201ENSMUST00000196794 96 ntBASIC1.34□□□□□ -2.19
Usf1Q61069 Gm5023-201ENSMUST00000217442 587 ntBASIC1.34□□□□□ -2.19
Usf1Q61069 AC122905.2-201ENSMUST00000220325 269 ntBASIC1.34□□□□□ -2.19
Usf1Q61069 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.34□□□□□ -2.19
Usf1Q61069 Gm26056-201ENSMUST00000083043 104 ntBASIC1.34□□□□□ -2.19
Usf1Q61069 Mir133a-1-201ENSMUST00000083465 68 ntBASIC1.34□□□□□ -2.19
Usf1Q61069 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
Usf1Q61069 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Usf1Q61069 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.33□□□□□ -2.2
Usf1Q61069 Gm26500-201ENSMUST00000101867 106 ntBASIC1.33□□□□□ -2.2
Usf1Q61069 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
Usf1Q61069 Gm22027-201ENSMUST00000122737 127 ntBASIC1.33□□□□□ -2.2
Usf1Q61069 Gm25491-201ENSMUST00000158733 308 ntBASIC1.33□□□□□ -2.2
Usf1Q61069 Igkv17-134-201ENSMUST00000168310 348 ntBASIC1.33□□□□□ -2.2
Usf1Q61069 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC1.33□□□□□ -2.2
Usf1Q61069 Mir3057-201ENSMUST00000175040 91 ntBASIC1.33□□□□□ -2.2
Usf1Q61069 Gm24618-201ENSMUST00000177718 94 ntBASIC1.33□□□□□ -2.2
Usf1Q61069 Gm24487-201ENSMUST00000178017 63 ntBASIC1.33□□□□□ -2.2
Usf1Q61069 Gm23953-201ENSMUST00000178214 94 ntBASIC1.33□□□□□ -2.2
Usf1Q61069 Gm26332-201ENSMUST00000179813 94 ntBASIC1.33□□□□□ -2.2
Usf1Q61069 Gm22863-201ENSMUST00000180265 94 ntBASIC1.33□□□□□ -2.2
Usf1Q61069 Mir6394-201ENSMUST00000184738 99 ntBASIC1.33□□□□□ -2.2
Usf1Q61069 Gm29603-201ENSMUST00000186792 334 ntBASIC1.33□□□□□ -2.2
Usf1Q61069 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
Usf1Q61069 Gm35736-201ENSMUST00000203681 313 ntBASIC1.33□□□□□ -2.2
Usf1Q61069 AC155712.1-201ENSMUST00000219704 160 ntBASIC1.33□□□□□ -2.2
Usf1Q61069 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC1.33□□□□□ -2.2
Usf1Q61069 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.33□□□□□ -2.2
Usf1Q61069 AC151833.1-201ENSMUST00000227752 574 ntBASIC1.33□□□□□ -2.2
Usf1Q61069 Snora3-201ENSMUST00000083082 132 ntBASIC1.33□□□□□ -2.2
Usf1Q61069 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Usf1Q61069 Gm11359-201ENSMUST00000120039 567 ntBASIC1.32□□□□□ -2.2
Usf1Q61069 Gm11606-201ENSMUST00000120706 617 ntBASIC1.32□□□□□ -2.2
Usf1Q61069 Gm24262-201ENSMUST00000157431 144 ntBASIC1.32□□□□□ -2.2
Usf1Q61069 Gm27517-201ENSMUST00000184347 236 ntBASIC1.32□□□□□ -2.2
Usf1Q61069 Gm27656-201ENSMUST00000185055 80 ntBASIC1.32□□□□□ -2.2
Usf1Q61069 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.32□□□□□ -2.2
Usf1Q61069 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
Usf1Q61069 Gm46997-201ENSMUST00000222108 217 ntBASIC1.32□□□□□ -2.2
Usf1Q61069 Gm24625-201ENSMUST00000082622 130 ntBASIC1.32□□□□□ -2.2
Usf1Q61069 Gm24152-201ENSMUST00000082764 163 ntBASIC1.32□□□□□ -2.2
Usf1Q61069 Rny1-201ENSMUST00000083767 112 ntBASIC1.32□□□□□ -2.2
Usf1Q61069 Gm4746-201ENSMUST00000120395 2406 ntBASIC1.31□□□□□ -2.2
Usf1Q61069 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.31□□□□□ -2.2
Usf1Q61069 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
Usf1Q61069 Gm14937-201ENSMUST00000119709 208 ntBASIC1.31□□□□□ -2.2
Usf1Q61069 Gm24632-201ENSMUST00000122770 323 ntBASIC1.31□□□□□ -2.2
Usf1Q61069 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
Usf1Q61069 Gm25914-201ENSMUST00000157618 153 ntBASIC1.31□□□□□ -2.2
Usf1Q61069 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.31□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 145.6 ms