Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm8219-201ENSMUST00000218309 242 ntBASIC-0.27□□□□□ -2.45
Trav3-1Q5R1I8 Gm32300-201ENSMUST00000221735 515 ntBASIC-0.27□□□□□ -2.45
Trav3-1Q5R1I8 CT030645.1-201ENSMUST00000224020 231 ntBASIC-0.27□□□□□ -2.45
Trav3-1Q5R1I8 Gm24045-201ENSMUST00000083113 98 ntBASIC-0.27□□□□□ -2.45
Trav3-1Q5R1I8 Gm22935-201ENSMUST00000103960 104 ntBASIC-0.28□□□□□ -2.45
Trav3-1Q5R1I8 Gm22021-201ENSMUST00000104353 107 ntBASIC-0.28□□□□□ -2.45
Trav3-1Q5R1I8 Gm7916-201ENSMUST00000120325 456 ntBASIC-0.28□□□□□ -2.45
Trav3-1Q5R1I8 Gm22664-201ENSMUST00000158719 105 ntBASIC-0.28□□□□□ -2.45
Trav3-1Q5R1I8 Gm3027-201ENSMUST00000167579 451 ntBASIC-0.28□□□□□ -2.45
Trav3-1Q5R1I8 Gm22914-201ENSMUST00000175195 77 ntBASIC-0.28□□□□□ -2.45
Trav3-1Q5R1I8 Gm20689-201ENSMUST00000176033 279 ntBASIC-0.28□□□□□ -2.45
Trav3-1Q5R1I8 Gm29432-201ENSMUST00000185397 139 ntBASIC-0.28□□□□□ -2.45
Trav3-1Q5R1I8 Gm37586-201ENSMUST00000193654 204 ntBASIC-0.28□□□□□ -2.45
Trav3-1Q5R1I8 CT033781.2-201ENSMUST00000221113 153 ntBASIC-0.28□□□□□ -2.45
Trav3-1Q5R1I8 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC-0.28□□□□□ -2.45
Trav3-1Q5R1I8 Mir382-201ENSMUST00000083494 76 ntBASIC-0.28□□□□□ -2.45
Trav3-1Q5R1I8 AC162910.1-201ENSMUST00000221219 1723 ntBASIC-0.29□□□□□ -2.46
Trav3-1Q5R1I8 Gm23422-201ENSMUST00000102000 107 ntBASIC-0.29□□□□□ -2.46
Trav3-1Q5R1I8 n-R5s202-201ENSMUST00000104517 114 ntBASIC-0.29□□□□□ -2.46
Trav3-1Q5R1I8 Gm23118-201ENSMUST00000122657 187 ntBASIC-0.29□□□□□ -2.46
Trav3-1Q5R1I8 n-R5s6-201ENSMUST00000122663 88 ntBASIC-0.29□□□□□ -2.46
Trav3-1Q5R1I8 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC-0.29□□□□□ -2.46
Trav3-1Q5R1I8 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC-0.29□□□□□ -2.46
Trav3-1Q5R1I8 Gm19572-201ENSMUST00000214326 338 ntBASIC-0.29□□□□□ -2.46
Trav3-1Q5R1I8 AC121114.1-201ENSMUST00000228522 570 ntBASIC-0.29□□□□□ -2.46
Trav3-1Q5R1I8 Gm13729-201ENSMUST00000120328 406 ntBASIC-0.3□□□□□ -2.46
Trav3-1Q5R1I8 Gm14392-201ENSMUST00000120332 401 ntBASIC-0.3□□□□□ -2.46
Trav3-1Q5R1I8 Gm14765-201ENSMUST00000121954 326 ntBASIC-0.3□□□□□ -2.46
Trav3-1Q5R1I8 Gm14413-201ENSMUST00000122158 408 ntBASIC-0.3□□□□□ -2.46
Trav3-1Q5R1I8 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.3□□□□□ -2.46
Trav3-1Q5R1I8 Gm18417-201ENSMUST00000176564 648 ntBASIC-0.3□□□□□ -2.46
Trav3-1Q5R1I8 Gm28414-201ENSMUST00000190111 294 ntBASIC-0.3□□□□□ -2.46
Trav3-1Q5R1I8 Gm37946-201ENSMUST00000192064 347 ntBASIC-0.3□□□□□ -2.46
Trav3-1Q5R1I8 Gm26301-201ENSMUST00000104813 95 ntBASIC-0.31□□□□□ -2.46
Trav3-1Q5R1I8 Gm14931-201ENSMUST00000111079 253 ntBASIC-0.31□□□□□ -2.46
Trav3-1Q5R1I8 Gm12105-201ENSMUST00000120846 779 ntBASIC-0.31□□□□□ -2.46
Trav3-1Q5R1I8 Gm20391-201ENSMUST00000174722 106 ntBASIC-0.31□□□□□ -2.46
Trav3-1Q5R1I8 Mir7077-201ENSMUST00000183991 57 ntBASIC-0.31□□□□□ -2.46
Trav3-1Q5R1I8 Mir3569-201ENSMUST00000185080 58 ntBASIC-0.31□□□□□ -2.46
Trav3-1Q5R1I8 Gm44337-201ENSMUST00000196553 114 ntBASIC-0.31□□□□□ -2.46
Trav3-1Q5R1I8 AC098718.1-201ENSMUST00000226166 175 ntBASIC-0.31□□□□□ -2.46
Trav3-1Q5R1I8 Gm13577-201ENSMUST00000121365 205 ntBASIC-0.32□□□□□ -2.46
Trav3-1Q5R1I8 Gm24840-201ENSMUST00000122603 147 ntBASIC-0.32□□□□□ -2.46
Trav3-1Q5R1I8 Gm24015-201ENSMUST00000157725 232 ntBASIC-0.32□□□□□ -2.46
Trav3-1Q5R1I8 Gm25384-201ENSMUST00000157807 105 ntBASIC-0.32□□□□□ -2.46
Trav3-1Q5R1I8 Gm24321-201ENSMUST00000175348 80 ntBASIC-0.32□□□□□ -2.46
Trav3-1Q5R1I8 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC-0.32□□□□□ -2.46
Trav3-1Q5R1I8 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC-0.32□□□□□ -2.46
Trav3-1Q5R1I8 AL928567.1-201ENSMUST00000197891 138 ntBASIC-0.32□□□□□ -2.46
Trav3-1Q5R1I8 Gm45232-201ENSMUST00000207811 162 ntBASIC-0.32□□□□□ -2.46
Trav3-1Q5R1I8 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC-0.32□□□□□ -2.46
Trav3-1Q5R1I8 CT009713.9-201ENSMUST00000223604 389 ntBASIC-0.32□□□□□ -2.46
Trav3-1Q5R1I8 Mir126a-201ENSMUST00000083606 73 ntBASIC-0.32□□□□□ -2.46
Trav3-1Q5R1I8 Gm15289-201ENSMUST00000117793 244 ntBASIC-0.33□□□□□ -2.46
Trav3-1Q5R1I8 Gm16032-201ENSMUST00000118534 168 ntBASIC-0.33□□□□□ -2.46
Trav3-1Q5R1I8 Gm14793-201ENSMUST00000118739 311 ntBASIC-0.33□□□□□ -2.46
Trav3-1Q5R1I8 Gm23996-201ENSMUST00000158062 131 ntBASIC-0.33□□□□□ -2.46
Trav3-1Q5R1I8 Gm25300-201ENSMUST00000175284 84 ntBASIC-0.33□□□□□ -2.46
Trav3-1Q5R1I8 Gm25949-201ENSMUST00000175333 114 ntBASIC-0.33□□□□□ -2.46
Trav3-1Q5R1I8 Platr25-208ENSMUST00000222602 939 ntBASIC-0.33□□□□□ -2.46
Trav3-1Q5R1I8 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC-0.33□□□□□ -2.46
Trav3-1Q5R1I8 Gm22505-201ENSMUST00000082956 108 ntBASIC-0.33□□□□□ -2.46
Trav3-1Q5R1I8 Gm22363-201ENSMUST00000083100 108 ntBASIC-0.33□□□□□ -2.46
Trav3-1Q5R1I8 Gm25651-201ENSMUST00000083782 119 ntBASIC-0.33□□□□□ -2.46
Trav3-1Q5R1I8 Mir490-201ENSMUST00000093567 84 ntBASIC-0.33□□□□□ -2.46
Trav3-1Q5R1I8 Gm24163-201ENSMUST00000093660 132 ntBASIC-0.33□□□□□ -2.46
Trav3-1Q5R1I8 Gm26274-201ENSMUST00000157103 321 ntBASIC-0.34□□□□□ -2.46
Trav3-1Q5R1I8 Gm23230-201ENSMUST00000157298 133 ntBASIC-0.34□□□□□ -2.46
Trav3-1Q5R1I8 Gm22967-201ENSMUST00000157956 239 ntBASIC-0.34□□□□□ -2.46
Trav3-1Q5R1I8 Scarna3a-201ENSMUST00000158911 140 ntBASIC-0.34□□□□□ -2.46
Trav3-1Q5R1I8 Gm6003-201ENSMUST00000187903 463 ntBASIC-0.34□□□□□ -2.46
Trav3-1Q5R1I8 Gm37715-201ENSMUST00000193206 235 ntBASIC-0.34□□□□□ -2.46
Trav3-1Q5R1I8 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.34□□□□□ -2.46
Trav3-1Q5R1I8 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC-0.34□□□□□ -2.46
Trav3-1Q5R1I8 AC163033.1-201ENSMUST00000218608 157 ntBASIC-0.34□□□□□ -2.46
Trav3-1Q5R1I8 AC124569.4-201ENSMUST00000223830 1220 ntBASIC-0.34□□□□□ -2.46
Trav3-1Q5R1I8 Snord85-201ENSMUST00000083262 73 ntBASIC-0.34□□□□□ -2.46
Trav3-1Q5R1I8 Mir155-201ENSMUST00000083463 65 ntBASIC-0.34□□□□□ -2.46
Trav3-1Q5R1I8 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC-0.35□□□□□ -2.47
Trav3-1Q5R1I8 Snord89-201ENSMUST00000104516 110 ntBASIC-0.35□□□□□ -2.47
Trav3-1Q5R1I8 Gm25563-201ENSMUST00000104603 74 ntBASIC-0.35□□□□□ -2.47
Trav3-1Q5R1I8 Gm14782-201ENSMUST00000120151 195 ntBASIC-0.35□□□□□ -2.47
Trav3-1Q5R1I8 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC-0.35□□□□□ -2.47
Trav3-1Q5R1I8 Gm12779-201ENSMUST00000121496 143 ntBASIC-0.35□□□□□ -2.47
Trav3-1Q5R1I8 Gm22764-201ENSMUST00000158370 92 ntBASIC-0.35□□□□□ -2.47
Trav3-1Q5R1I8 Gm25307-201ENSMUST00000158885 106 ntBASIC-0.35□□□□□ -2.47
Trav3-1Q5R1I8 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC-0.35□□□□□ -2.47
Trav3-1Q5R1I8 Gm44282-201ENSMUST00000203199 190 ntBASIC-0.35□□□□□ -2.47
Trav3-1Q5R1I8 Gm44010-201ENSMUST00000204432 331 ntBASIC-0.35□□□□□ -2.47
Trav3-1Q5R1I8 Gm3702-201ENSMUST00000211754 346 ntBASIC-0.35□□□□□ -2.47
Trav3-1Q5R1I8 AC136457.1-201ENSMUST00000224195 156 ntBASIC-0.35□□□□□ -2.47
Trav3-1Q5R1I8 AC134860.6-201ENSMUST00000226038 285 ntBASIC-0.35□□□□□ -2.47
Trav3-1Q5R1I8 Gm25697-201ENSMUST00000082902 98 ntBASIC-0.35□□□□□ -2.47
Trav3-1Q5R1I8 Gm24616-201ENSMUST00000083274 139 ntBASIC-0.35□□□□□ -2.47
Trav3-1Q5R1I8 Gm25513-201ENSMUST00000083861 162 ntBASIC-0.35□□□□□ -2.47
Trav3-1Q5R1I8 Gm22003-201ENSMUST00000101885 107 ntBASIC-0.36□□□□□ -2.47
Trav3-1Q5R1I8 Mir709-201ENSMUST00000102190 88 ntBASIC-0.36□□□□□ -2.47
Trav3-1Q5R1I8 Gm22831-201ENSMUST00000102473 109 ntBASIC-0.36□□□□□ -2.47
Trav3-1Q5R1I8 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.36□□□□□ -2.47
Trav3-1Q5R1I8 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC-0.36□□□□□ -2.47
Retrieved 100 of 76,532 protein–RNA pairs in 172.6 ms