Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC0.39□□□□□ -2.35
Trav5d-4Q5R1F6 Gm22522-201ENSMUST00000158271 151 ntBASIC0.39□□□□□ -2.35
Trav5d-4Q5R1F6 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.39□□□□□ -2.35
Trav5d-4Q5R1F6 Mir6905-201ENSMUST00000184228 70 ntBASIC0.39□□□□□ -2.35
Trav5d-4Q5R1F6 Gm28435-201ENSMUST00000185496 108 ntBASIC0.39□□□□□ -2.35
Trav5d-4Q5R1F6 Gm26265-202ENSMUST00000196326 133 ntBASIC0.39□□□□□ -2.35
Trav5d-4Q5R1F6 Gm42719-201ENSMUST00000197393 355 ntBASIC0.39□□□□□ -2.35
Trav5d-4Q5R1F6 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC0.39□□□□□ -2.35
Trav5d-4Q5R1F6 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.39□□□□□ -2.35
Trav5d-4Q5R1F6 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
Trav5d-4Q5R1F6 Gm22149-201ENSMUST00000104442 136 ntBASIC0.38□□□□□ -2.35
Trav5d-4Q5R1F6 Gm11862-201ENSMUST00000119678 659 ntBASIC0.38□□□□□ -2.35
Trav5d-4Q5R1F6 Gm23981-201ENSMUST00000157136 106 ntBASIC0.38□□□□□ -2.35
Trav5d-4Q5R1F6 Gm22328-201ENSMUST00000158074 112 ntBASIC0.38□□□□□ -2.35
Trav5d-4Q5R1F6 Gm23008-201ENSMUST00000158946 80 ntBASIC0.38□□□□□ -2.35
Trav5d-4Q5R1F6 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
Trav5d-4Q5R1F6 Spanxn4-201ENSMUST00000172433 424 ntBASIC0.38□□□□□ -2.35
Trav5d-4Q5R1F6 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC0.38□□□□□ -2.35
Trav5d-4Q5R1F6 Gm43432-201ENSMUST00000196352 121 ntBASIC0.38□□□□□ -2.35
Trav5d-4Q5R1F6 Gm35212-201ENSMUST00000196672 606 ntBASIC0.38□□□□□ -2.35
Trav5d-4Q5R1F6 Gm44976-201ENSMUST00000205543 261 ntBASIC0.38□□□□□ -2.35
Trav5d-4Q5R1F6 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC0.38□□□□□ -2.35
Trav5d-4Q5R1F6 Gm24038-201ENSMUST00000082872 159 ntBASIC0.38□□□□□ -2.35
Trav5d-4Q5R1F6 Mir344-201ENSMUST00000083634 95 ntBASIC0.38□□□□□ -2.35
Trav5d-4Q5R1F6 Gm24258-201ENSMUST00000083739 133 ntBASIC0.38□□□□□ -2.35
Trav5d-4Q5R1F6 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC0.37□□□□□ -2.35
Trav5d-4Q5R1F6 Gm22759-201ENSMUST00000102276 96 ntBASIC0.37□□□□□ -2.35
Trav5d-4Q5R1F6 Gm13804-201ENSMUST00000119552 172 ntBASIC0.37□□□□□ -2.35
Trav5d-4Q5R1F6 Gm11248-201ENSMUST00000119568 201 ntBASIC0.37□□□□□ -2.35
Trav5d-4Q5R1F6 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.37□□□□□ -2.35
Trav5d-4Q5R1F6 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC0.37□□□□□ -2.35
Trav5d-4Q5R1F6 Gm22796-201ENSMUST00000157234 106 ntBASIC0.37□□□□□ -2.35
Trav5d-4Q5R1F6 Gm24910-201ENSMUST00000157289 272 ntBASIC0.37□□□□□ -2.35
Trav5d-4Q5R1F6 Mir1936-201ENSMUST00000158699 93 ntBASIC0.37□□□□□ -2.35
Trav5d-4Q5R1F6 Gm24678-201ENSMUST00000158756 104 ntBASIC0.37□□□□□ -2.35
Trav5d-4Q5R1F6 Gm22802-201ENSMUST00000175621 89 ntBASIC0.37□□□□□ -2.35
Trav5d-4Q5R1F6 Gm23725-201ENSMUST00000177876 107 ntBASIC0.37□□□□□ -2.35
Trav5d-4Q5R1F6 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC0.37□□□□□ -2.35
Trav5d-4Q5R1F6 Gm27490-201ENSMUST00000184754 128 ntBASIC0.37□□□□□ -2.35
Trav5d-4Q5R1F6 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC0.37□□□□□ -2.35
Trav5d-4Q5R1F6 AC153864.2-201ENSMUST00000220424 292 ntBASIC0.37□□□□□ -2.35
Trav5d-4Q5R1F6 CT954323.1-201ENSMUST00000222774 229 ntBASIC0.37□□□□□ -2.35
Trav5d-4Q5R1F6 AC102291.2-201ENSMUST00000228083 367 ntBASIC0.37□□□□□ -2.35
Trav5d-4Q5R1F6 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.37□□□□□ -2.35
Trav5d-4Q5R1F6 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.37□□□□□ -2.35
Trav5d-4Q5R1F6 Gm23991-201ENSMUST00000117033 93 ntBASIC0.36□□□□□ -2.35
Trav5d-4Q5R1F6 Gm24726-201ENSMUST00000158232 121 ntBASIC0.36□□□□□ -2.35
Trav5d-4Q5R1F6 Mir15a-201ENSMUST00000175266 84 ntBASIC0.36□□□□□ -2.35
Trav5d-4Q5R1F6 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
Trav5d-4Q5R1F6 Gm44465-201ENSMUST00000199536 114 ntBASIC0.36□□□□□ -2.35
Trav5d-4Q5R1F6 AC164612.2-202ENSMUST00000216314 253 ntBASIC0.36□□□□□ -2.35
Trav5d-4Q5R1F6 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC0.36□□□□□ -2.35
Trav5d-4Q5R1F6 AC116589.7-201ENSMUST00000221061 239 ntBASIC0.36□□□□□ -2.35
Trav5d-4Q5R1F6 AC164117.1-201ENSMUST00000221726 239 ntBASIC0.36□□□□□ -2.35
Trav5d-4Q5R1F6 AC167192.4-201ENSMUST00000224087 993 ntBASIC0.36□□□□□ -2.35
Trav5d-4Q5R1F6 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
Trav5d-4Q5R1F6 Gm26457-201ENSMUST00000082678 78 ntBASIC0.36□□□□□ -2.35
Trav5d-4Q5R1F6 Gm23130-201ENSMUST00000104252 74 ntBASIC0.35□□□□□ -2.35
Trav5d-4Q5R1F6 Gm25378-201ENSMUST00000104333 129 ntBASIC0.35□□□□□ -2.35
Trav5d-4Q5R1F6 Gm11334-201ENSMUST00000121969 156 ntBASIC0.35□□□□□ -2.35
Trav5d-4Q5R1F6 Gm25543-201ENSMUST00000122678 312 ntBASIC0.35□□□□□ -2.35
Trav5d-4Q5R1F6 Gm26484-201ENSMUST00000158018 106 ntBASIC0.35□□□□□ -2.35
Trav5d-4Q5R1F6 Gm27013-201ENSMUST00000182441 1024 ntBASIC0.35□□□□□ -2.35
Trav5d-4Q5R1F6 Gm44954-201ENSMUST00000208513 227 ntBASIC0.35□□□□□ -2.35
Trav5d-4Q5R1F6 Gm9973-202ENSMUST00000220926 166 ntBASIC0.35□□□□□ -2.35
Trav5d-4Q5R1F6 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.35□□□□□ -2.35
Trav5d-4Q5R1F6 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.35□□□□□ -2.35
Trav5d-4Q5R1F6 Gm26377-201ENSMUST00000102184 108 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm16242-201ENSMUST00000117741 334 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm13153-201ENSMUST00000120969 637 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm13577-201ENSMUST00000121365 205 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm24596-201ENSMUST00000122504 107 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm22279-201ENSMUST00000157200 93 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm25054-201ENSMUST00000157370 97 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm25884-201ENSMUST00000157782 62 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm24584-201ENSMUST00000157972 107 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm25211-201ENSMUST00000177553 107 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm23151-201ENSMUST00000178061 107 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm25245-201ENSMUST00000178139 107 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm26245-201ENSMUST00000178491 107 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm23610-201ENSMUST00000178659 107 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm25101-201ENSMUST00000179057 107 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm26378-201ENSMUST00000179093 107 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm23712-201ENSMUST00000179713 107 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm25173-201ENSMUST00000179794 107 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm24870-201ENSMUST00000179897 107 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm22645-201ENSMUST00000180010 107 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm24565-201ENSMUST00000180099 107 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm23805-201ENSMUST00000180129 107 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm23144-201ENSMUST00000180226 107 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm25327-201ENSMUST00000180263 107 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm22418-201ENSMUST00000180326 107 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm27624-201ENSMUST00000185047 177 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Mir691-201ENSMUST00000199719 78 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 AC156574.2-201ENSMUST00000228023 282 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm23629-201ENSMUST00000082465 107 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 107.8 ms