Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Snord68-201ENSMUST00000082516 86 ntBASIC0.87□□□□□ -2.27
Col27a1Q5QNQ9 Gm26066-201ENSMUST00000083385 109 ntBASIC0.87□□□□□ -2.27
Col27a1Q5QNQ9 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
Col27a1Q5QNQ9 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
Col27a1Q5QNQ9 Gm25541-201ENSMUST00000116888 126 ntBASIC0.87□□□□□ -2.27
Col27a1Q5QNQ9 Gm12417-201ENSMUST00000119153 403 ntBASIC0.87□□□□□ -2.27
Col27a1Q5QNQ9 Gm11572-201ENSMUST00000119164 120 ntBASIC0.87□□□□□ -2.27
Col27a1Q5QNQ9 Gm24896-201ENSMUST00000122741 135 ntBASIC0.87□□□□□ -2.27
Col27a1Q5QNQ9 Gm24851-201ENSMUST00000158028 103 ntBASIC0.87□□□□□ -2.27
Col27a1Q5QNQ9 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC0.87□□□□□ -2.27
Col27a1Q5QNQ9 Gm20477-201ENSMUST00000174028 280 ntBASIC0.87□□□□□ -2.27
Col27a1Q5QNQ9 Gm26335-201ENSMUST00000178449 107 ntBASIC0.87□□□□□ -2.27
Col27a1Q5QNQ9 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
Col27a1Q5QNQ9 Gm16399-201ENSMUST00000181423 219 ntBASIC0.87□□□□□ -2.27
Col27a1Q5QNQ9 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC0.87□□□□□ -2.27
Col27a1Q5QNQ9 Gm28506-201ENSMUST00000189937 150 ntBASIC0.87□□□□□ -2.27
Col27a1Q5QNQ9 Gm37361-201ENSMUST00000194345 132 ntBASIC0.87□□□□□ -2.27
Col27a1Q5QNQ9 Gm42570-201ENSMUST00000195937 292 ntBASIC0.87□□□□□ -2.27
Col27a1Q5QNQ9 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
Col27a1Q5QNQ9 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC0.87□□□□□ -2.27
Col27a1Q5QNQ9 Gm17990-201ENSMUST00000211728 553 ntBASIC0.87□□□□□ -2.27
Col27a1Q5QNQ9 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
Col27a1Q5QNQ9 Gm23454-201ENSMUST00000083332 133 ntBASIC0.87□□□□□ -2.27
Col27a1Q5QNQ9 AC133079.1-201ENSMUST00000220943 1881 ntBASIC0.86□□□□□ -2.27
Col27a1Q5QNQ9 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
Col27a1Q5QNQ9 Gm3027-201ENSMUST00000167579 451 ntBASIC0.86□□□□□ -2.27
Col27a1Q5QNQ9 Gm17100-201ENSMUST00000168963 272 ntBASIC0.86□□□□□ -2.27
Col27a1Q5QNQ9 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC0.86□□□□□ -2.27
Col27a1Q5QNQ9 Gm27587-201ENSMUST00000185116 163 ntBASIC0.86□□□□□ -2.27
Col27a1Q5QNQ9 Gm42533-201ENSMUST00000196247 157 ntBASIC0.86□□□□□ -2.27
Col27a1Q5QNQ9 Gm43624-201ENSMUST00000197368 180 ntBASIC0.86□□□□□ -2.27
Col27a1Q5QNQ9 AC147560.1-201ENSMUST00000197528 107 ntBASIC0.86□□□□□ -2.27
Col27a1Q5QNQ9 Gm20102-201ENSMUST00000222445 220 ntBASIC0.86□□□□□ -2.27
Col27a1Q5QNQ9 AC164304.1-201ENSMUST00000226920 272 ntBASIC0.86□□□□□ -2.27
Col27a1Q5QNQ9 Gm23097-201ENSMUST00000083448 105 ntBASIC0.86□□□□□ -2.27
Col27a1Q5QNQ9 Snord98-201ENSMUST00000116819 65 ntBASIC0.85□□□□□ -2.27
Col27a1Q5QNQ9 Gm15861-201ENSMUST00000120979 339 ntBASIC0.85□□□□□ -2.27
Col27a1Q5QNQ9 Gm22537-201ENSMUST00000158172 199 ntBASIC0.85□□□□□ -2.27
Col27a1Q5QNQ9 Gm18185-201ENSMUST00000186725 667 ntBASIC0.85□□□□□ -2.27
Col27a1Q5QNQ9 Gm29640-201ENSMUST00000187972 278 ntBASIC0.85□□□□□ -2.27
Col27a1Q5QNQ9 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC0.85□□□□□ -2.27
Col27a1Q5QNQ9 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC0.85□□□□□ -2.27
Col27a1Q5QNQ9 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
Col27a1Q5QNQ9 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC0.85□□□□□ -2.27
Col27a1Q5QNQ9 Gm21937-201ENSMUST00000222825 218 ntBASIC0.85□□□□□ -2.27
Col27a1Q5QNQ9 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
Col27a1Q5QNQ9 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
Col27a1Q5QNQ9 Gm23090-201ENSMUST00000177331 78 ntBASIC0.85□□□□□ -2.27
Col27a1Q5QNQ9 Gm22166-201ENSMUST00000178419 121 ntBASIC0.85□□□□□ -2.27
Col27a1Q5QNQ9 Gm23288-201ENSMUST00000179213 121 ntBASIC0.85□□□□□ -2.27
Col27a1Q5QNQ9 Gm29037-201ENSMUST00000189092 313 ntBASIC0.85□□□□□ -2.27
Col27a1Q5QNQ9 Gm29350-201ENSMUST00000189141 541 ntBASIC0.85□□□□□ -2.27
Col27a1Q5QNQ9 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC0.85□□□□□ -2.27
Col27a1Q5QNQ9 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC0.85□□□□□ -2.27
Col27a1Q5QNQ9 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC0.85□□□□□ -2.27
Col27a1Q5QNQ9 Gm19441-201ENSMUST00000221545 330 ntBASIC0.85□□□□□ -2.27
Col27a1Q5QNQ9 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC0.84□□□□□ -2.27
Col27a1Q5QNQ9 Mir701-201ENSMUST00000102208 109 ntBASIC0.84□□□□□ -2.28
Col27a1Q5QNQ9 Gm25759-201ENSMUST00000103988 129 ntBASIC0.84□□□□□ -2.28
Col27a1Q5QNQ9 Gm22193-201ENSMUST00000116868 76 ntBASIC0.84□□□□□ -2.28
Col27a1Q5QNQ9 Gm14624-201ENSMUST00000117746 192 ntBASIC0.84□□□□□ -2.28
Col27a1Q5QNQ9 Mir1904-201ENSMUST00000122702 80 ntBASIC0.84□□□□□ -2.28
Col27a1Q5QNQ9 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC0.84□□□□□ -2.28
Col27a1Q5QNQ9 Gm22944-201ENSMUST00000158662 133 ntBASIC0.84□□□□□ -2.28
Col27a1Q5QNQ9 Gm23180-201ENSMUST00000158686 125 ntBASIC0.84□□□□□ -2.28
Col27a1Q5QNQ9 Gm25253-201ENSMUST00000179958 107 ntBASIC0.84□□□□□ -2.28
Col27a1Q5QNQ9 Gm44387-201ENSMUST00000196298 145 ntBASIC0.84□□□□□ -2.28
Col27a1Q5QNQ9 Gm42774-201ENSMUST00000198854 283 ntBASIC0.84□□□□□ -2.28
Col27a1Q5QNQ9 Gm43199-201ENSMUST00000200019 307 ntBASIC0.84□□□□□ -2.28
Col27a1Q5QNQ9 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
Col27a1Q5QNQ9 Gm5899-201ENSMUST00000071770 270 ntBASIC0.84□□□□□ -2.28
Col27a1Q5QNQ9 Snord118-201ENSMUST00000082965 135 ntBASIC0.84□□□□□ -2.28
Col27a1Q5QNQ9 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC0.84□□□□□ -2.28
Col27a1Q5QNQ9 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.84□□□□□ -2.28
Col27a1Q5QNQ9 Gm12255-201ENSMUST00000117184 284 ntBASIC0.83□□□□□ -2.28
Col27a1Q5QNQ9 Gm12304-201ENSMUST00000120312 385 ntBASIC0.83□□□□□ -2.28
Col27a1Q5QNQ9 Gm14364-201ENSMUST00000129209 267 ntBASIC0.83□□□□□ -2.28
Col27a1Q5QNQ9 Gm26150-201ENSMUST00000157426 151 ntBASIC0.83□□□□□ -2.28
Col27a1Q5QNQ9 Gm25375-201ENSMUST00000158157 135 ntBASIC0.83□□□□□ -2.28
Col27a1Q5QNQ9 Gm18588-201ENSMUST00000177308 492 ntBASIC0.83□□□□□ -2.28
Col27a1Q5QNQ9 Mir7683-201ENSMUST00000183842 61 ntBASIC0.83□□□□□ -2.28
Col27a1Q5QNQ9 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC0.83□□□□□ -2.28
Col27a1Q5QNQ9 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC0.83□□□□□ -2.28
Col27a1Q5QNQ9 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
Col27a1Q5QNQ9 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC0.83□□□□□ -2.28
Col27a1Q5QNQ9 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC0.83□□□□□ -2.28
Col27a1Q5QNQ9 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC0.83□□□□□ -2.28
Col27a1Q5QNQ9 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC0.83□□□□□ -2.28
Col27a1Q5QNQ9 Gm44654-201ENSMUST00000208052 329 ntBASIC0.83□□□□□ -2.28
Col27a1Q5QNQ9 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
Col27a1Q5QNQ9 Gm7495-201ENSMUST00000215099 426 ntBASIC0.83□□□□□ -2.28
Col27a1Q5QNQ9 AC163295.1-201ENSMUST00000227840 314 ntBASIC0.83□□□□□ -2.28
Col27a1Q5QNQ9 Gm23515-201ENSMUST00000082829 107 ntBASIC0.83□□□□□ -2.28
Col27a1Q5QNQ9 Gm22689-201ENSMUST00000102452 110 ntBASIC0.82□□□□□ -2.28
Col27a1Q5QNQ9 Gm24079-201ENSMUST00000104352 132 ntBASIC0.82□□□□□ -2.28
Col27a1Q5QNQ9 Gm26249-201ENSMUST00000116708 118 ntBASIC0.82□□□□□ -2.28
Col27a1Q5QNQ9 Gm12225-201ENSMUST00000117995 298 ntBASIC0.82□□□□□ -2.28
Col27a1Q5QNQ9 Gm24772-201ENSMUST00000158507 110 ntBASIC0.82□□□□□ -2.28
Col27a1Q5QNQ9 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
Col27a1Q5QNQ9 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC0.82□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms