Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Gm14980-201ENSMUST00000121247 736 ntBASIC1.46□□□□□ -2.18
Usp28Q5I043 Gm22836-201ENSMUST00000158441 61 ntBASIC1.46□□□□□ -2.18
Usp28Q5I043 Gm22945-201ENSMUST00000158557 157 ntBASIC1.46□□□□□ -2.18
Usp28Q5I043 Gm22011-201ENSMUST00000158790 123 ntBASIC1.46□□□□□ -2.18
Usp28Q5I043 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC1.46□□□□□ -2.18
Usp28Q5I043 Gm38041-201ENSMUST00000194445 661 ntBASIC1.46□□□□□ -2.18
Usp28Q5I043 Mir7661-201ENSMUST00000197023 61 ntBASIC1.46□□□□□ -2.18
Usp28Q5I043 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Usp28Q5I043 AC164161.1-201ENSMUST00000214076 639 ntBASIC1.46□□□□□ -2.18
Usp28Q5I043 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.46□□□□□ -2.18
Usp28Q5I043 Snord42a-201ENSMUST00000082606 65 ntBASIC1.46□□□□□ -2.18
Usp28Q5I043 Gm25135-201ENSMUST00000082648 143 ntBASIC1.46□□□□□ -2.18
Usp28Q5I043 Gm22299-201ENSMUST00000082663 136 ntBASIC1.46□□□□□ -2.18
Usp28Q5I043 Mir32-201ENSMUST00000083610 70 ntBASIC1.46□□□□□ -2.18
Usp28Q5I043 Gm25937-201ENSMUST00000083912 107 ntBASIC1.46□□□□□ -2.18
Usp28Q5I043 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Usp28Q5I043 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
Usp28Q5I043 Gm24865-201ENSMUST00000103246 96 ntBASIC1.45□□□□□ -2.18
Usp28Q5I043 Gm25805-201ENSMUST00000122788 108 ntBASIC1.45□□□□□ -2.18
Usp28Q5I043 Gm25671-201ENSMUST00000178612 105 ntBASIC1.45□□□□□ -2.18
Usp28Q5I043 Gm23307-201ENSMUST00000179167 105 ntBASIC1.45□□□□□ -2.18
Usp28Q5I043 Gm25286-201ENSMUST00000179790 105 ntBASIC1.45□□□□□ -2.18
Usp28Q5I043 Mir7063-201ENSMUST00000184158 91 ntBASIC1.45□□□□□ -2.18
Usp28Q5I043 Gm28408-201ENSMUST00000191557 463 ntBASIC1.45□□□□□ -2.18
Usp28Q5I043 Gm43884-201ENSMUST00000204251 559 ntBASIC1.45□□□□□ -2.18
Usp28Q5I043 Gm18617-201ENSMUST00000222311 259 ntBASIC1.45□□□□□ -2.18
Usp28Q5I043 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.45□□□□□ -2.18
Usp28Q5I043 Gm24152-201ENSMUST00000082764 163 ntBASIC1.45□□□□□ -2.18
Usp28Q5I043 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.45□□□□□ -2.18
Usp28Q5I043 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
Usp28Q5I043 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Usp28Q5I043 Gm14307-201ENSMUST00000118930 291 ntBASIC1.44□□□□□ -2.18
Usp28Q5I043 Gm14297-201ENSMUST00000129110 291 ntBASIC1.44□□□□□ -2.18
Usp28Q5I043 Gm16362-201ENSMUST00000135189 214 ntBASIC1.44□□□□□ -2.18
Usp28Q5I043 Gm16358-201ENSMUST00000146046 210 ntBASIC1.44□□□□□ -2.18
Usp28Q5I043 Gm26049-201ENSMUST00000157313 108 ntBASIC1.44□□□□□ -2.18
Usp28Q5I043 Mir1936-201ENSMUST00000158699 93 ntBASIC1.44□□□□□ -2.18
Usp28Q5I043 Gm24390-201ENSMUST00000179578 62 ntBASIC1.44□□□□□ -2.18
Usp28Q5I043 Gm17067-202ENSMUST00000180131 123 ntBASIC1.44□□□□□ -2.18
Usp28Q5I043 Gm29603-201ENSMUST00000186792 334 ntBASIC1.44□□□□□ -2.18
Usp28Q5I043 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.44□□□□□ -2.18
Usp28Q5I043 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC1.44□□□□□ -2.18
Usp28Q5I043 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.44□□□□□ -2.18
Usp28Q5I043 Gm24977-201ENSMUST00000083106 163 ntBASIC1.44□□□□□ -2.18
Usp28Q5I043 Mir429-201ENSMUST00000083493 83 ntBASIC1.44□□□□□ -2.18
Usp28Q5I043 Gm26329-201ENSMUST00000093723 110 ntBASIC1.44□□□□□ -2.18
Usp28Q5I043 Gm23951-201ENSMUST00000104029 132 ntBASIC1.43□□□□□ -2.18
Usp28Q5I043 Gm23015-201ENSMUST00000104145 128 ntBASIC1.43□□□□□ -2.18
Usp28Q5I043 Gm25421-201ENSMUST00000104218 164 ntBASIC1.43□□□□□ -2.18
Usp28Q5I043 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Usp28Q5I043 Gm24275-201ENSMUST00000116780 146 ntBASIC1.43□□□□□ -2.18
Usp28Q5I043 Gm14674-201ENSMUST00000117816 342 ntBASIC1.43□□□□□ -2.18
Usp28Q5I043 Gm12417-201ENSMUST00000119153 403 ntBASIC1.43□□□□□ -2.18
Usp28Q5I043 Gm11862-201ENSMUST00000119678 659 ntBASIC1.43□□□□□ -2.18
Usp28Q5I043 Gm13992-201ENSMUST00000120558 156 ntBASIC1.43□□□□□ -2.18
Usp28Q5I043 Gm11834-201ENSMUST00000122257 585 ntBASIC1.43□□□□□ -2.18
Usp28Q5I043 Gm26255-201ENSMUST00000122492 103 ntBASIC1.43□□□□□ -2.18
Usp28Q5I043 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
Usp28Q5I043 Gm22221-201ENSMUST00000157362 103 ntBASIC1.43□□□□□ -2.18
Usp28Q5I043 Gm23779-201ENSMUST00000157938 64 ntBASIC1.43□□□□□ -2.18
Usp28Q5I043 Gm23024-201ENSMUST00000158770 292 ntBASIC1.43□□□□□ -2.18
Usp28Q5I043 Mir3086-201ENSMUST00000175072 87 ntBASIC1.43□□□□□ -2.18
Usp28Q5I043 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC1.43□□□□□ -2.18
Usp28Q5I043 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC1.43□□□□□ -2.18
Usp28Q5I043 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC1.43□□□□□ -2.18
Usp28Q5I043 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC1.43□□□□□ -2.18
Usp28Q5I043 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC1.43□□□□□ -2.18
Usp28Q5I043 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC1.43□□□□□ -2.18
Usp28Q5I043 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC1.43□□□□□ -2.18
Usp28Q5I043 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC1.43□□□□□ -2.18
Usp28Q5I043 Gm22263-201ENSMUST00000180060 104 ntBASIC1.43□□□□□ -2.18
Usp28Q5I043 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Usp28Q5I043 Gm27271-201ENSMUST00000183509 170 ntBASIC1.43□□□□□ -2.18
Usp28Q5I043 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC1.43□□□□□ -2.18
Usp28Q5I043 Gm43250-201ENSMUST00000196536 273 ntBASIC1.43□□□□□ -2.18
Usp28Q5I043 Mir3961-201ENSMUST00000198795 59 ntBASIC1.43□□□□□ -2.18
Usp28Q5I043 Gm44384-201ENSMUST00000200208 114 ntBASIC1.43□□□□□ -2.18
Usp28Q5I043 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.43□□□□□ -2.18
Usp28Q5I043 Gm25930-201ENSMUST00000082785 107 ntBASIC1.43□□□□□ -2.18
Usp28Q5I043 Gm22972-201ENSMUST00000083297 131 ntBASIC1.43□□□□□ -2.18
Usp28Q5I043 Mir759-201ENSMUST00000103254 98 ntBASIC1.42□□□□□ -2.18
Usp28Q5I043 Mir465b-1-201ENSMUST00000103940 79 ntBASIC1.42□□□□□ -2.18
Usp28Q5I043 Gm22021-201ENSMUST00000104353 107 ntBASIC1.42□□□□□ -2.18
Usp28Q5I043 Mir465b-2-201ENSMUST00000104662 79 ntBASIC1.42□□□□□ -2.18
Usp28Q5I043 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Usp28Q5I043 Gm14678-201ENSMUST00000121396 482 ntBASIC1.42□□□□□ -2.18
Usp28Q5I043 Gm22315-201ENSMUST00000158010 143 ntBASIC1.42□□□□□ -2.18
Usp28Q5I043 Snord87-201ENSMUST00000175437 87 ntBASIC1.42□□□□□ -2.18
Usp28Q5I043 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.42□□□□□ -2.18
Usp28Q5I043 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.42□□□□□ -2.18
Usp28Q5I043 Gm44419-201ENSMUST00000203338 229 ntBASIC1.42□□□□□ -2.18
Usp28Q5I043 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC1.42□□□□□ -2.18
Usp28Q5I043 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.42□□□□□ -2.18
Usp28Q5I043 Gm24765-201ENSMUST00000083691 103 ntBASIC1.42□□□□□ -2.18
Usp28Q5I043 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.42□□□□□ -2.18
Usp28Q5I043 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.42□□□□□ -2.18
Usp28Q5I043 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Usp28Q5I043 Gm23172-201ENSMUST00000157160 124 ntBASIC1.41□□□□□ -2.18
Usp28Q5I043 Gm22485-201ENSMUST00000157990 109 ntBASIC1.41□□□□□ -2.18
Usp28Q5I043 Gm24902-201ENSMUST00000158126 123 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 198.9 ms