Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm25357-201ENSMUST00000082745 72 ntBASIC-0.85□□□□□ -2.55
Ccdc88bQ4QRL3 Gm25408-201ENSMUST00000104104 133 ntBASIC-0.86□□□□□ -2.55
Ccdc88bQ4QRL3 Gm23202-201ENSMUST00000104376 129 ntBASIC-0.86□□□□□ -2.55
Ccdc88bQ4QRL3 Gm23390-201ENSMUST00000157393 106 ntBASIC-0.86□□□□□ -2.55
Ccdc88bQ4QRL3 Gm26150-201ENSMUST00000157426 151 ntBASIC-0.86□□□□□ -2.55
Ccdc88bQ4QRL3 Gm23858-201ENSMUST00000158384 106 ntBASIC-0.86□□□□□ -2.55
Ccdc88bQ4QRL3 Gm26405-201ENSMUST00000158495 100 ntBASIC-0.86□□□□□ -2.55
Ccdc88bQ4QRL3 Gm20438-201ENSMUST00000174441 329 ntBASIC-0.86□□□□□ -2.55
Ccdc88bQ4QRL3 Mir3101-201ENSMUST00000175607 88 ntBASIC-0.86□□□□□ -2.55
Ccdc88bQ4QRL3 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC-0.86□□□□□ -2.55
Ccdc88bQ4QRL3 Mir468-201ENSMUST00000197332 78 ntBASIC-0.86□□□□□ -2.55
Ccdc88bQ4QRL3 Snora62-201ENSMUST00000082991 149 ntBASIC-0.86□□□□□ -2.55
Ccdc88bQ4QRL3 Gm23528-201ENSMUST00000104571 132 ntBASIC-0.86□□□□□ -2.55
Ccdc88bQ4QRL3 Gm11386-201ENSMUST00000117761 347 ntBASIC-0.86□□□□□ -2.55
Ccdc88bQ4QRL3 Gm12433-201ENSMUST00000119659 255 ntBASIC-0.86□□□□□ -2.55
Ccdc88bQ4QRL3 Gm24015-201ENSMUST00000157725 232 ntBASIC-0.86□□□□□ -2.55
Ccdc88bQ4QRL3 Gm25525-201ENSMUST00000177701 107 ntBASIC-0.86□□□□□ -2.55
Ccdc88bQ4QRL3 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC-0.86□□□□□ -2.55
Ccdc88bQ4QRL3 Gm2829-201ENSMUST00000213121 499 ntBASIC-0.86□□□□□ -2.55
Ccdc88bQ4QRL3 Gm22971-201ENSMUST00000083305 97 ntBASIC-0.86□□□□□ -2.55
Ccdc88bQ4QRL3 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC-0.87□□□□□ -2.55
Ccdc88bQ4QRL3 Mir1961-201ENSMUST00000158643 112 ntBASIC-0.87□□□□□ -2.55
Ccdc88bQ4QRL3 Gm22013-201ENSMUST00000158788 103 ntBASIC-0.87□□□□□ -2.55
Ccdc88bQ4QRL3 Gm23197-201ENSMUST00000158809 112 ntBASIC-0.87□□□□□ -2.55
Ccdc88bQ4QRL3 Gm25671-201ENSMUST00000178612 105 ntBASIC-0.87□□□□□ -2.55
Ccdc88bQ4QRL3 Gm23307-201ENSMUST00000179167 105 ntBASIC-0.87□□□□□ -2.55
Ccdc88bQ4QRL3 Gm25286-201ENSMUST00000179790 105 ntBASIC-0.87□□□□□ -2.55
Ccdc88bQ4QRL3 Mir3068-202ENSMUST00000197755 79 ntBASIC-0.87□□□□□ -2.55
Ccdc88bQ4QRL3 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC-0.87□□□□□ -2.55
Ccdc88bQ4QRL3 AC135292.1-201ENSMUST00000227665 204 ntBASIC-0.87□□□□□ -2.55
Ccdc88bQ4QRL3 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.88□□□□□ -2.55
Ccdc88bQ4QRL3 Gm24278-201ENSMUST00000104239 127 ntBASIC-0.88□□□□□ -2.55
Ccdc88bQ4QRL3 Gm13343-201ENSMUST00000116474 105 ntBASIC-0.88□□□□□ -2.55
Ccdc88bQ4QRL3 Gm22091-201ENSMUST00000116908 127 ntBASIC-0.88□□□□□ -2.55
Ccdc88bQ4QRL3 Gm18415-201ENSMUST00000177464 647 ntBASIC-0.88□□□□□ -2.55
Ccdc88bQ4QRL3 AC163660.3-201ENSMUST00000224253 1563 ntBASIC-0.88□□□□□ -2.55
Ccdc88bQ4QRL3 AC163295.1-201ENSMUST00000227840 314 ntBASIC-0.88□□□□□ -2.55
Ccdc88bQ4QRL3 Gm22704-201ENSMUST00000083027 137 ntBASIC-0.88□□□□□ -2.55
Ccdc88bQ4QRL3 Gm24536-201ENSMUST00000083144 107 ntBASIC-0.88□□□□□ -2.55
Ccdc88bQ4QRL3 Gm25582-201ENSMUST00000083412 110 ntBASIC-0.88□□□□□ -2.55
Ccdc88bQ4QRL3 Gm24917-201ENSMUST00000083935 104 ntBASIC-0.88□□□□□ -2.55
Ccdc88bQ4QRL3 Mir293-201ENSMUST00000104841 80 ntBASIC-0.89□□□□□ -2.55
Ccdc88bQ4QRL3 Gm24141-201ENSMUST00000122776 115 ntBASIC-0.89□□□□□ -2.55
Ccdc88bQ4QRL3 Scarna3a-201ENSMUST00000158911 140 ntBASIC-0.89□□□□□ -2.55
Ccdc88bQ4QRL3 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC-0.89□□□□□ -2.55
Ccdc88bQ4QRL3 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC-0.89□□□□□ -2.55
Ccdc88bQ4QRL3 Gm27639-201ENSMUST00000184937 85 ntBASIC-0.89□□□□□ -2.55
Ccdc88bQ4QRL3 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC-0.89□□□□□ -2.55
Ccdc88bQ4QRL3 Gm28418-201ENSMUST00000186179 423 ntBASIC-0.89□□□□□ -2.55
Ccdc88bQ4QRL3 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC-0.89□□□□□ -2.55
Ccdc88bQ4QRL3 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC-0.89□□□□□ -2.55
Ccdc88bQ4QRL3 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC-0.89□□□□□ -2.55
Ccdc88bQ4QRL3 Gm37193-201ENSMUST00000193087 513 ntBASIC-0.89□□□□□ -2.55
Ccdc88bQ4QRL3 Gm42647-201ENSMUST00000195939 459 ntBASIC-0.89□□□□□ -2.55
Ccdc88bQ4QRL3 Gm42516-201ENSMUST00000198691 767 ntBASIC-0.89□□□□□ -2.55
Ccdc88bQ4QRL3 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC-0.89□□□□□ -2.55
Ccdc88bQ4QRL3 Gm22226-201ENSMUST00000157355 109 ntBASIC-0.9□□□□□ -2.55
Ccdc88bQ4QRL3 Gm24584-201ENSMUST00000157972 107 ntBASIC-0.9□□□□□ -2.55
Ccdc88bQ4QRL3 Rnu7-201ENSMUST00000158458 62 ntBASIC-0.9□□□□□ -2.55
Ccdc88bQ4QRL3 Gm22800-201ENSMUST00000175627 94 ntBASIC-0.9□□□□□ -2.55
Ccdc88bQ4QRL3 Gm25211-201ENSMUST00000177553 107 ntBASIC-0.9□□□□□ -2.55
Ccdc88bQ4QRL3 Gm25101-201ENSMUST00000179057 107 ntBASIC-0.9□□□□□ -2.55
Ccdc88bQ4QRL3 Gm25173-201ENSMUST00000179794 107 ntBASIC-0.9□□□□□ -2.55
Ccdc88bQ4QRL3 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC-0.9□□□□□ -2.55
Ccdc88bQ4QRL3 Gm29308-201ENSMUST00000188863 315 ntBASIC-0.9□□□□□ -2.55
Ccdc88bQ4QRL3 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.9□□□□□ -2.55
Ccdc88bQ4QRL3 Gm22809-201ENSMUST00000082743 156 ntBASIC-0.9□□□□□ -2.55
Ccdc88bQ4QRL3 Gm26054-201ENSMUST00000083037 107 ntBASIC-0.9□□□□□ -2.55
Ccdc88bQ4QRL3 Gm26324-201ENSMUST00000083073 107 ntBASIC-0.9□□□□□ -2.55
Ccdc88bQ4QRL3 Gm26127-201ENSMUST00000083193 107 ntBASIC-0.9□□□□□ -2.55
Ccdc88bQ4QRL3 Gm23732-201ENSMUST00000083751 107 ntBASIC-0.9□□□□□ -2.55
Ccdc88bQ4QRL3 Gm22352-201ENSMUST00000083917 107 ntBASIC-0.9□□□□□ -2.55
Ccdc88bQ4QRL3 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC-0.9□□□□□ -2.55
Ccdc88bQ4QRL3 Gm24910-201ENSMUST00000157289 272 ntBASIC-0.91□□□□□ -2.55
Ccdc88bQ4QRL3 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC-0.91□□□□□ -2.55
Ccdc88bQ4QRL3 Gm25457-201ENSMUST00000179509 107 ntBASIC-0.91□□□□□ -2.55
Ccdc88bQ4QRL3 Gm27365-201ENSMUST00000184041 177 ntBASIC-0.91□□□□□ -2.55
Ccdc88bQ4QRL3 Gm42855-201ENSMUST00000197388 253 ntBASIC-0.91□□□□□ -2.55
Ccdc88bQ4QRL3 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC-0.91□□□□□ -2.55
Ccdc88bQ4QRL3 Gm24527-201ENSMUST00000082920 107 ntBASIC-0.91□□□□□ -2.55
Ccdc88bQ4QRL3 Gm25991-201ENSMUST00000102439 99 ntBASIC-0.92□□□□□ -2.56
Ccdc88bQ4QRL3 Gm27396-201ENSMUST00000157708 58 ntBASIC-0.92□□□□□ -2.56
Ccdc88bQ4QRL3 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC-0.92□□□□□ -2.56
Ccdc88bQ4QRL3 Gm42924-201ENSMUST00000197261 185 ntBASIC-0.92□□□□□ -2.56
Ccdc88bQ4QRL3 Gm23829-201ENSMUST00000157392 270 ntBASIC-0.92□□□□□ -2.56
Ccdc88bQ4QRL3 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-0.92□□□□□ -2.56
Ccdc88bQ4QRL3 Gm6660-201ENSMUST00000179149 468 ntBASIC-0.92□□□□□ -2.56
Ccdc88bQ4QRL3 Gm22779-201ENSMUST00000104085 107 ntBASIC-0.93□□□□□ -2.56
Ccdc88bQ4QRL3 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC-0.93□□□□□ -2.56
Ccdc88bQ4QRL3 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC-0.93□□□□□ -2.56
Ccdc88bQ4QRL3 Gm22247-201ENSMUST00000082476 131 ntBASIC-0.93□□□□□ -2.56
Ccdc88bQ4QRL3 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.93□□□□□ -2.56
Ccdc88bQ4QRL3 Gm25006-201ENSMUST00000083813 107 ntBASIC-0.93□□□□□ -2.56
Ccdc88bQ4QRL3 Gm11065-201ENSMUST00000111462 228 ntBASIC-0.94□□□□□ -2.56
Ccdc88bQ4QRL3 Gm11322-201ENSMUST00000118095 435 ntBASIC-0.94□□□□□ -2.56
Ccdc88bQ4QRL3 Gm26274-201ENSMUST00000157103 321 ntBASIC-0.94□□□□□ -2.56
Ccdc88bQ4QRL3 Mir7010-201ENSMUST00000183464 63 ntBASIC-0.94□□□□□ -2.56
Ccdc88bQ4QRL3 Mir8106-201ENSMUST00000184520 139 ntBASIC-0.94□□□□□ -2.56
Ccdc88bQ4QRL3 Gm27421-201ENSMUST00000184729 167 ntBASIC-0.94□□□□□ -2.56
Ccdc88bQ4QRL3 Gm24523-201ENSMUST00000083965 132 ntBASIC-0.94□□□□□ -2.56
Retrieved 100 of 76,532 protein–RNA pairs in 168 ms