Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm14678-201ENSMUST00000121396 482 ntBASIC1.42□□□□□ -2.18
Upf3aQ3ULJ3 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.42□□□□□ -2.18
Upf3aQ3ULJ3 Gm23329-201ENSMUST00000157415 108 ntBASIC1.42□□□□□ -2.18
Upf3aQ3ULJ3 Gm23120-201ENSMUST00000157654 287 ntBASIC1.42□□□□□ -2.18
Upf3aQ3ULJ3 Gm22315-201ENSMUST00000158010 143 ntBASIC1.42□□□□□ -2.18
Upf3aQ3ULJ3 Gm23760-201ENSMUST00000158350 116 ntBASIC1.42□□□□□ -2.18
Upf3aQ3ULJ3 Gm24348-201ENSMUST00000158710 130 ntBASIC1.42□□□□□ -2.18
Upf3aQ3ULJ3 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.42□□□□□ -2.18
Upf3aQ3ULJ3 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
Upf3aQ3ULJ3 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Upf3aQ3ULJ3 Mir7063-201ENSMUST00000184158 91 ntBASIC1.42□□□□□ -2.18
Upf3aQ3ULJ3 Gm28995-201ENSMUST00000186625 261 ntBASIC1.42□□□□□ -2.18
Upf3aQ3ULJ3 Gm19901-201ENSMUST00000192191 495 ntBASIC1.42□□□□□ -2.18
Upf3aQ3ULJ3 Gm37399-201ENSMUST00000195224 416 ntBASIC1.42□□□□□ -2.18
Upf3aQ3ULJ3 Gm44655-201ENSMUST00000207768 423 ntBASIC1.42□□□□□ -2.18
Upf3aQ3ULJ3 Gm34783-201ENSMUST00000209159 303 ntBASIC1.42□□□□□ -2.18
Upf3aQ3ULJ3 AC102369.1-201ENSMUST00000218415 373 ntBASIC1.42□□□□□ -2.18
Upf3aQ3ULJ3 n-R5s94-201ENSMUST00000082573 119 ntBASIC1.42□□□□□ -2.18
Upf3aQ3ULJ3 Mir340-201ENSMUST00000083483 98 ntBASIC1.42□□□□□ -2.18
Upf3aQ3ULJ3 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC1.42□□□□□ -2.18
Upf3aQ3ULJ3 Gm25992-201ENSMUST00000102437 109 ntBASIC1.41□□□□□ -2.18
Upf3aQ3ULJ3 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Upf3aQ3ULJ3 Gm22149-201ENSMUST00000104442 136 ntBASIC1.41□□□□□ -2.18
Upf3aQ3ULJ3 Mir872-201ENSMUST00000104728 81 ntBASIC1.41□□□□□ -2.18
Upf3aQ3ULJ3 Gm25541-201ENSMUST00000116888 126 ntBASIC1.41□□□□□ -2.18
Upf3aQ3ULJ3 Gm14803-201ENSMUST00000117163 361 ntBASIC1.41□□□□□ -2.18
Upf3aQ3ULJ3 Gm6829-201ENSMUST00000119858 360 ntBASIC1.41□□□□□ -2.18
Upf3aQ3ULJ3 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.41□□□□□ -2.18
Upf3aQ3ULJ3 Gm23083-201ENSMUST00000157851 116 ntBASIC1.41□□□□□ -2.18
Upf3aQ3ULJ3 Gm25434-201ENSMUST00000158278 167 ntBASIC1.41□□□□□ -2.18
Upf3aQ3ULJ3 Gm24487-201ENSMUST00000178017 63 ntBASIC1.41□□□□□ -2.18
Upf3aQ3ULJ3 Mir7052-201ENSMUST00000184821 65 ntBASIC1.41□□□□□ -2.18
Upf3aQ3ULJ3 Gm28257-201ENSMUST00000185244 463 ntBASIC1.41□□□□□ -2.18
Upf3aQ3ULJ3 Gm29603-201ENSMUST00000186792 334 ntBASIC1.41□□□□□ -2.18
Upf3aQ3ULJ3 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC1.41□□□□□ -2.18
Upf3aQ3ULJ3 Gm44010-201ENSMUST00000204432 331 ntBASIC1.41□□□□□ -2.18
Upf3aQ3ULJ3 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC1.41□□□□□ -2.18
Upf3aQ3ULJ3 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC1.41□□□□□ -2.18
Upf3aQ3ULJ3 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.41□□□□□ -2.18
Upf3aQ3ULJ3 Gm23242-201ENSMUST00000083055 107 ntBASIC1.41□□□□□ -2.18
Upf3aQ3ULJ3 Gm24252-201ENSMUST00000083700 132 ntBASIC1.41□□□□□ -2.18
Upf3aQ3ULJ3 Mir653-201ENSMUST00000102402 85 ntBASIC1.4□□□□□ -2.19
Upf3aQ3ULJ3 Gm26301-201ENSMUST00000104813 95 ntBASIC1.4□□□□□ -2.19
Upf3aQ3ULJ3 Gm14574-201ENSMUST00000120644 279 ntBASIC1.4□□□□□ -2.19
Upf3aQ3ULJ3 Gm11254-201ENSMUST00000122368 653 ntBASIC1.4□□□□□ -2.19
Upf3aQ3ULJ3 Gm25982-201ENSMUST00000157920 101 ntBASIC1.4□□□□□ -2.19
Upf3aQ3ULJ3 Gm24192-201ENSMUST00000157978 145 ntBASIC1.4□□□□□ -2.19
Upf3aQ3ULJ3 Gm26029-201ENSMUST00000158659 132 ntBASIC1.4□□□□□ -2.19
Upf3aQ3ULJ3 Gm20477-201ENSMUST00000174028 280 ntBASIC1.4□□□□□ -2.19
Upf3aQ3ULJ3 Gm23636-201ENSMUST00000175070 95 ntBASIC1.4□□□□□ -2.19
Upf3aQ3ULJ3 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC1.4□□□□□ -2.19
Upf3aQ3ULJ3 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC1.4□□□□□ -2.19
Upf3aQ3ULJ3 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC1.4□□□□□ -2.19
Upf3aQ3ULJ3 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC1.4□□□□□ -2.19
Upf3aQ3ULJ3 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC1.4□□□□□ -2.19
Upf3aQ3ULJ3 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC1.4□□□□□ -2.19
Upf3aQ3ULJ3 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC1.4□□□□□ -2.19
Upf3aQ3ULJ3 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC1.4□□□□□ -2.19
Upf3aQ3ULJ3 Gm28453-203ENSMUST00000187041 189 ntBASIC1.4□□□□□ -2.19
Upf3aQ3ULJ3 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.4□□□□□ -2.19
Upf3aQ3ULJ3 Gm43976-201ENSMUST00000203637 235 ntBASIC1.4□□□□□ -2.19
Upf3aQ3ULJ3 Gm44687-201ENSMUST00000204975 235 ntBASIC1.4□□□□□ -2.19
Upf3aQ3ULJ3 AC122905.2-201ENSMUST00000220325 269 ntBASIC1.4□□□□□ -2.19
Upf3aQ3ULJ3 CT009713.9-201ENSMUST00000223604 389 ntBASIC1.4□□□□□ -2.19
Upf3aQ3ULJ3 AC100209.2-201ENSMUST00000224461 451 ntBASIC1.4□□□□□ -2.19
Upf3aQ3ULJ3 AC125311.1-201ENSMUST00000226950 220 ntBASIC1.4□□□□□ -2.19
Upf3aQ3ULJ3 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
Upf3aQ3ULJ3 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.39□□□□□ -2.19
Upf3aQ3ULJ3 Gm14972-201ENSMUST00000121780 364 ntBASIC1.39□□□□□ -2.19
Upf3aQ3ULJ3 Gm23535-201ENSMUST00000157542 106 ntBASIC1.39□□□□□ -2.19
Upf3aQ3ULJ3 Gm22075-201ENSMUST00000158599 192 ntBASIC1.39□□□□□ -2.19
Upf3aQ3ULJ3 Gm20438-201ENSMUST00000174441 329 ntBASIC1.39□□□□□ -2.19
Upf3aQ3ULJ3 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
Upf3aQ3ULJ3 Gm18546-201ENSMUST00000197245 676 ntBASIC1.39□□□□□ -2.19
Upf3aQ3ULJ3 Gm43993-201ENSMUST00000203972 247 ntBASIC1.39□□□□□ -2.19
Upf3aQ3ULJ3 Gm44960-201ENSMUST00000207403 141 ntBASIC1.39□□□□□ -2.19
Upf3aQ3ULJ3 AC154296.2-201ENSMUST00000214696 545 ntBASIC1.39□□□□□ -2.19
Upf3aQ3ULJ3 AC164117.2-201ENSMUST00000222090 327 ntBASIC1.39□□□□□ -2.19
Upf3aQ3ULJ3 AC151833.1-201ENSMUST00000227752 574 ntBASIC1.39□□□□□ -2.19
Upf3aQ3ULJ3 Gm22685-201ENSMUST00000082848 106 ntBASIC1.39□□□□□ -2.19
Upf3aQ3ULJ3 Gm24977-201ENSMUST00000083106 163 ntBASIC1.39□□□□□ -2.19
Upf3aQ3ULJ3 Gm24079-201ENSMUST00000104352 132 ntBASIC1.38□□□□□ -2.19
Upf3aQ3ULJ3 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC1.38□□□□□ -2.19
Upf3aQ3ULJ3 Gm11859-201ENSMUST00000118099 455 ntBASIC1.38□□□□□ -2.19
Upf3aQ3ULJ3 Gm24504-201ENSMUST00000157679 100 ntBASIC1.38□□□□□ -2.19
Upf3aQ3ULJ3 Gm23090-201ENSMUST00000177331 78 ntBASIC1.38□□□□□ -2.19
Upf3aQ3ULJ3 Gm24799-201ENSMUST00000178431 79 ntBASIC1.38□□□□□ -2.19
Upf3aQ3ULJ3 Gm22263-201ENSMUST00000180060 104 ntBASIC1.38□□□□□ -2.19
Upf3aQ3ULJ3 Mir8119-201ENSMUST00000183371 129 ntBASIC1.38□□□□□ -2.19
Upf3aQ3ULJ3 Gm26265-202ENSMUST00000196326 133 ntBASIC1.38□□□□□ -2.19
Upf3aQ3ULJ3 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC1.38□□□□□ -2.19
Upf3aQ3ULJ3 AC109212.1-201ENSMUST00000215561 427 ntBASIC1.38□□□□□ -2.19
Upf3aQ3ULJ3 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Upf3aQ3ULJ3 Gm24624-201ENSMUST00000082617 164 ntBASIC1.38□□□□□ -2.19
Upf3aQ3ULJ3 Gm25929-201ENSMUST00000082784 107 ntBASIC1.38□□□□□ -2.19
Upf3aQ3ULJ3 Gm22364-201ENSMUST00000083097 98 ntBASIC1.38□□□□□ -2.19
Upf3aQ3ULJ3 Gm22972-201ENSMUST00000083297 131 ntBASIC1.38□□□□□ -2.19
Upf3aQ3ULJ3 Gm25578-201ENSMUST00000083406 104 ntBASIC1.38□□□□□ -2.19
Upf3aQ3ULJ3 Mir181a-1-201ENSMUST00000083631 87 ntBASIC1.38□□□□□ -2.19
Upf3aQ3ULJ3 AC121844.2-201ENSMUST00000219067 2066 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 109.3 ms