Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.69□□□□□ -2.14
Trafd1Q3UDK1 Gm45616-201ENSMUST00000211711 319 ntBASIC1.69□□□□□ -2.14
Trafd1Q3UDK1 Gm24152-201ENSMUST00000082764 163 ntBASIC1.69□□□□□ -2.14
Trafd1Q3UDK1 Mir340-201ENSMUST00000083483 98 ntBASIC1.69□□□□□ -2.14
Trafd1Q3UDK1 Mir300-201ENSMUST00000083485 79 ntBASIC1.69□□□□□ -2.14
Trafd1Q3UDK1 Gm23851-201ENSMUST00000083831 103 ntBASIC1.69□□□□□ -2.14
Trafd1Q3UDK1 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.69□□□□□ -2.14
Trafd1Q3UDK1 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Trafd1Q3UDK1 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Trafd1Q3UDK1 Mir465b-1-201ENSMUST00000103940 79 ntBASIC1.68□□□□□ -2.14
Trafd1Q3UDK1 Mir465b-2-201ENSMUST00000104662 79 ntBASIC1.68□□□□□ -2.14
Trafd1Q3UDK1 Gm24907-201ENSMUST00000116932 128 ntBASIC1.68□□□□□ -2.14
Trafd1Q3UDK1 Gm11322-201ENSMUST00000118095 435 ntBASIC1.68□□□□□ -2.14
Trafd1Q3UDK1 Gm24630-201ENSMUST00000122768 106 ntBASIC1.68□□□□□ -2.14
Trafd1Q3UDK1 Gm25805-201ENSMUST00000122788 108 ntBASIC1.68□□□□□ -2.14
Trafd1Q3UDK1 Gm23232-201ENSMUST00000157300 105 ntBASIC1.68□□□□□ -2.14
Trafd1Q3UDK1 Gm22535-201ENSMUST00000158174 119 ntBASIC1.68□□□□□ -2.14
Trafd1Q3UDK1 Gm26402-201ENSMUST00000158499 113 ntBASIC1.68□□□□□ -2.14
Trafd1Q3UDK1 Gm25711-201ENSMUST00000158633 128 ntBASIC1.68□□□□□ -2.14
Trafd1Q3UDK1 Mir5624-201ENSMUST00000176635 61 ntBASIC1.68□□□□□ -2.14
Trafd1Q3UDK1 Gm21885-201ENSMUST00000178891 327 ntBASIC1.68□□□□□ -2.14
Trafd1Q3UDK1 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.68□□□□□ -2.14
Trafd1Q3UDK1 Gm37713-201ENSMUST00000191746 198 ntBASIC1.68□□□□□ -2.14
Trafd1Q3UDK1 Gm36946-201ENSMUST00000192706 435 ntBASIC1.68□□□□□ -2.14
Trafd1Q3UDK1 Gm44473-201ENSMUST00000204039 152 ntBASIC1.68□□□□□ -2.14
Trafd1Q3UDK1 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC1.68□□□□□ -2.14
Trafd1Q3UDK1 Gm44666-201ENSMUST00000208544 391 ntBASIC1.68□□□□□ -2.14
Trafd1Q3UDK1 Gm45386-201ENSMUST00000210194 218 ntBASIC1.68□□□□□ -2.14
Trafd1Q3UDK1 AC116460.1-201ENSMUST00000219040 313 ntBASIC1.68□□□□□ -2.14
Trafd1Q3UDK1 AC154552.7-201ENSMUST00000222824 156 ntBASIC1.68□□□□□ -2.14
Trafd1Q3UDK1 Gm25078-201ENSMUST00000082530 107 ntBASIC1.68□□□□□ -2.14
Trafd1Q3UDK1 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm22193-201ENSMUST00000116868 76 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm11854-201ENSMUST00000117839 446 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm15002-201ENSMUST00000118406 452 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm11572-201ENSMUST00000119164 120 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm11786-201ENSMUST00000120799 155 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm22216-201ENSMUST00000157557 114 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm23474-201ENSMUST00000158884 75 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm23355-201ENSMUST00000177614 107 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm23148-201ENSMUST00000180367 107 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm27271-201ENSMUST00000183509 170 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm27248-201ENSMUST00000184004 166 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm29512-201ENSMUST00000185544 315 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm28110-201ENSMUST00000185782 315 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm29057-201ENSMUST00000186468 315 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm29661-201ENSMUST00000186781 315 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm28737-201ENSMUST00000186808 315 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm29147-201ENSMUST00000186846 315 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm29118-201ENSMUST00000186908 315 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm28433-201ENSMUST00000187085 315 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm29227-201ENSMUST00000187139 315 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm28759-201ENSMUST00000187621 315 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm28831-201ENSMUST00000187739 315 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm28200-201ENSMUST00000187778 315 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm29034-201ENSMUST00000188099 315 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm28752-201ENSMUST00000188340 315 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm29378-201ENSMUST00000188723 315 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm28569-201ENSMUST00000188748 315 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm28120-201ENSMUST00000188812 315 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm28369-201ENSMUST00000188993 315 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm29037-201ENSMUST00000189092 313 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm28909-201ENSMUST00000189406 315 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm28861-201ENSMUST00000189681 315 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm29180-201ENSMUST00000190003 315 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm29167-201ENSMUST00000190024 377 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm29575-201ENSMUST00000190597 315 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm28160-201ENSMUST00000191229 315 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm29469-201ENSMUST00000191448 315 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm37129-201ENSMUST00000195791 315 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm44373-201ENSMUST00000196112 169 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm26265-202ENSMUST00000196326 133 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Mir376a-201ENSMUST00000197584 68 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 AC145736.2-201ENSMUST00000216305 365 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm24165-201ENSMUST00000082718 128 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm24151-201ENSMUST00000082758 141 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm25930-201ENSMUST00000082785 107 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm25258-201ENSMUST00000083049 107 ntBASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Trafd1Q3UDK1 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
Trafd1Q3UDK1 Mir3096-201ENSMUST00000116685 71 ntBASIC1.66□□□□□ -2.14
Trafd1Q3UDK1 Gm14709-201ENSMUST00000121225 304 ntBASIC1.66□□□□□ -2.14
Trafd1Q3UDK1 Gm42672-201ENSMUST00000197821 352 ntBASIC1.66□□□□□ -2.14
Trafd1Q3UDK1 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.66□□□□□ -2.14
Trafd1Q3UDK1 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.66□□□□□ -2.14
Trafd1Q3UDK1 Gm4746-201ENSMUST00000120395 2406 ntBASIC1.66□□□□□ -2.14
Trafd1Q3UDK1 Gm25832-201ENSMUST00000104140 130 ntBASIC1.65□□□□□ -2.15
Trafd1Q3UDK1 Gm25115-201ENSMUST00000157187 140 ntBASIC1.65□□□□□ -2.15
Trafd1Q3UDK1 Gm5900-201ENSMUST00000179862 375 ntBASIC1.65□□□□□ -2.15
Trafd1Q3UDK1 Gm26200-201ENSMUST00000180273 79 ntBASIC1.65□□□□□ -2.15
Trafd1Q3UDK1 Mir6351-201ENSMUST00000183826 99 ntBASIC1.65□□□□□ -2.15
Trafd1Q3UDK1 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.65□□□□□ -2.15
Trafd1Q3UDK1 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC1.65□□□□□ -2.15
Trafd1Q3UDK1 AC164161.1-201ENSMUST00000214076 639 ntBASIC1.65□□□□□ -2.15
Trafd1Q3UDK1 AC154552.1-201ENSMUST00000222969 202 ntBASIC1.65□□□□□ -2.15
Trafd1Q3UDK1 Gm23406-201ENSMUST00000082537 122 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 99 ms