Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm9156-201ENSMUST00000189660 463 ntBASIC1.96□□□□□ -2.1
Brf2Q3UAW9 Gm32175-201ENSMUST00000193641 346 ntBASIC1.96□□□□□ -2.1
Brf2Q3UAW9 Gm43035-201ENSMUST00000197626 517 ntBASIC1.96□□□□□ -2.1
Brf2Q3UAW9 Gm44533-201ENSMUST00000207782 268 ntBASIC1.96□□□□□ -2.1
Brf2Q3UAW9 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.96□□□□□ -2.1
Brf2Q3UAW9 Gm23845-201ENSMUST00000083834 152 ntBASIC1.96□□□□□ -2.1
Brf2Q3UAW9 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.96□□□□□ -2.1
Brf2Q3UAW9 Gm22479-201ENSMUST00000122566 81 ntBASIC1.95□□□□□ -2.1
Brf2Q3UAW9 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Brf2Q3UAW9 Gm27540-201ENSMUST00000184950 187 ntBASIC1.95□□□□□ -2.1
Brf2Q3UAW9 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC1.95□□□□□ -2.1
Brf2Q3UAW9 AC145736.2-201ENSMUST00000216305 365 ntBASIC1.95□□□□□ -2.1
Brf2Q3UAW9 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.95□□□□□ -2.1
Brf2Q3UAW9 AC164086.1-201ENSMUST00000221038 289 ntBASIC1.95□□□□□ -2.1
Brf2Q3UAW9 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
Brf2Q3UAW9 Gm22215-201ENSMUST00000157558 96 ntBASIC1.94□□□□□ -2.1
Brf2Q3UAW9 Gm25460-201ENSMUST00000157954 127 ntBASIC1.94□□□□□ -2.1
Brf2Q3UAW9 Gm25371-201ENSMUST00000158162 101 ntBASIC1.94□□□□□ -2.1
Brf2Q3UAW9 Gm22537-201ENSMUST00000158172 199 ntBASIC1.94□□□□□ -2.1
Brf2Q3UAW9 Gm23342-201ENSMUST00000158958 115 ntBASIC1.94□□□□□ -2.1
Brf2Q3UAW9 Gm20477-201ENSMUST00000174028 280 ntBASIC1.94□□□□□ -2.1
Brf2Q3UAW9 Gm24510-201ENSMUST00000174965 94 ntBASIC1.94□□□□□ -2.1
Brf2Q3UAW9 Mir7016-201ENSMUST00000184308 72 ntBASIC1.94□□□□□ -2.1
Brf2Q3UAW9 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Brf2Q3UAW9 Gm37801-201ENSMUST00000194754 274 ntBASIC1.94□□□□□ -2.1
Brf2Q3UAW9 Gm44491-201ENSMUST00000196794 96 ntBASIC1.94□□□□□ -2.1
Brf2Q3UAW9 Gm44477-201ENSMUST00000199661 110 ntBASIC1.94□□□□□ -2.1
Brf2Q3UAW9 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC1.94□□□□□ -2.1
Brf2Q3UAW9 Gm25376-201ENSMUST00000104340 133 ntBASIC1.93□□□□□ -2.1
Brf2Q3UAW9 Gm22494-201ENSMUST00000104495 128 ntBASIC1.93□□□□□ -2.1
Brf2Q3UAW9 Gm25529-201ENSMUST00000104850 92 ntBASIC1.93□□□□□ -2.1
Brf2Q3UAW9 Gm11471-201ENSMUST00000121824 198 ntBASIC1.93□□□□□ -2.1
Brf2Q3UAW9 Gm24629-201ENSMUST00000122762 89 ntBASIC1.93□□□□□ -2.1
Brf2Q3UAW9 Gm23854-201ENSMUST00000158378 108 ntBASIC1.93□□□□□ -2.1
Brf2Q3UAW9 Gm26402-201ENSMUST00000158499 113 ntBASIC1.93□□□□□ -2.1
Brf2Q3UAW9 Gm23548-201ENSMUST00000158963 106 ntBASIC1.93□□□□□ -2.1
Brf2Q3UAW9 Gm21885-201ENSMUST00000178891 327 ntBASIC1.93□□□□□ -2.1
Brf2Q3UAW9 Gm27905-201ENSMUST00000184005 207 ntBASIC1.93□□□□□ -2.1
Brf2Q3UAW9 Mir6388-201ENSMUST00000184417 75 ntBASIC1.93□□□□□ -2.1
Brf2Q3UAW9 Mir7081-201ENSMUST00000184490 75 ntBASIC1.93□□□□□ -2.1
Brf2Q3UAW9 Gm28992-201ENSMUST00000190534 139 ntBASIC1.93□□□□□ -2.1
Brf2Q3UAW9 Mir7227-201ENSMUST00000200408 59 ntBASIC1.93□□□□□ -2.1
Brf2Q3UAW9 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC1.93□□□□□ -2.1
Brf2Q3UAW9 Gm45543-201ENSMUST00000209327 88 ntBASIC1.93□□□□□ -2.1
Brf2Q3UAW9 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC1.93□□□□□ -2.1
Brf2Q3UAW9 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.93□□□□□ -2.1
Brf2Q3UAW9 Gm26493-201ENSMUST00000083155 136 ntBASIC1.93□□□□□ -2.1
Brf2Q3UAW9 Mir181a-2-201ENSMUST00000083489 76 ntBASIC1.93□□□□□ -2.1
Brf2Q3UAW9 Gm42664-201ENSMUST00000199417 3239 ntBASIC1.93□□□□□ -2.1
Brf2Q3UAW9 Gm12837-201ENSMUST00000120131 373 ntBASIC1.92□□□□□ -2.1
Brf2Q3UAW9 Gm22216-201ENSMUST00000157557 114 ntBASIC1.92□□□□□ -2.1
Brf2Q3UAW9 Gm24851-201ENSMUST00000158028 103 ntBASIC1.92□□□□□ -2.1
Brf2Q3UAW9 Gm22075-201ENSMUST00000158599 192 ntBASIC1.92□□□□□ -2.1
Brf2Q3UAW9 Snord87-201ENSMUST00000175437 87 ntBASIC1.92□□□□□ -2.1
Brf2Q3UAW9 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC1.92□□□□□ -2.1
Brf2Q3UAW9 Gm22448-201ENSMUST00000179254 107 ntBASIC1.92□□□□□ -2.1
Brf2Q3UAW9 Gm35736-201ENSMUST00000203681 313 ntBASIC1.92□□□□□ -2.1
Brf2Q3UAW9 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC1.92□□□□□ -2.1
Brf2Q3UAW9 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.92□□□□□ -2.1
Brf2Q3UAW9 Gm11351-202ENSMUST00000225724 478 ntBASIC1.92□□□□□ -2.1
Brf2Q3UAW9 Gm23406-201ENSMUST00000082537 122 ntBASIC1.92□□□□□ -2.1
Brf2Q3UAW9 Gm26107-201ENSMUST00000083972 107 ntBASIC1.92□□□□□ -2.1
Brf2Q3UAW9 Gm24098-201ENSMUST00000102075 109 ntBASIC1.91□□□□□ -2.1
Brf2Q3UAW9 Gm25381-201ENSMUST00000102078 109 ntBASIC1.91□□□□□ -2.1
Brf2Q3UAW9 Gm25094-201ENSMUST00000103992 131 ntBASIC1.91□□□□□ -2.1
Brf2Q3UAW9 Gm13725-201ENSMUST00000122139 207 ntBASIC1.91□□□□□ -2.1
Brf2Q3UAW9 Gm24632-201ENSMUST00000122770 323 ntBASIC1.91□□□□□ -2.1
Brf2Q3UAW9 Gm5900-201ENSMUST00000179862 375 ntBASIC1.91□□□□□ -2.1
Brf2Q3UAW9 Gm28849-201ENSMUST00000188127 174 ntBASIC1.91□□□□□ -2.1
Brf2Q3UAW9 Gm28330-201ENSMUST00000190353 171 ntBASIC1.91□□□□□ -2.1
Brf2Q3UAW9 Gm43406-201ENSMUST00000200356 334 ntBASIC1.91□□□□□ -2.1
Brf2Q3UAW9 Gm45344-201ENSMUST00000211610 341 ntBASIC1.91□□□□□ -2.1
Brf2Q3UAW9 AC163033.1-201ENSMUST00000218608 157 ntBASIC1.91□□□□□ -2.1
Brf2Q3UAW9 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Brf2Q3UAW9 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Brf2Q3UAW9 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Brf2Q3UAW9 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Brf2Q3UAW9 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.9□□□□□ -2.1
Brf2Q3UAW9 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
Brf2Q3UAW9 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Brf2Q3UAW9 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Brf2Q3UAW9 Gm24068-201ENSMUST00000104513 132 ntBASIC1.9□□□□□ -2.11
Brf2Q3UAW9 Gm11322-201ENSMUST00000118095 435 ntBASIC1.9□□□□□ -2.11
Brf2Q3UAW9 Gm22217-201ENSMUST00000157556 313 ntBASIC1.9□□□□□ -2.11
Brf2Q3UAW9 Mir376a-201ENSMUST00000197584 68 ntBASIC1.9□□□□□ -2.11
Brf2Q3UAW9 Gm45005-201ENSMUST00000206640 157 ntBASIC1.9□□□□□ -2.11
Brf2Q3UAW9 Gm45907-201ENSMUST00000213023 193 ntBASIC1.9□□□□□ -2.11
Brf2Q3UAW9 Gm25930-201ENSMUST00000082785 107 ntBASIC1.9□□□□□ -2.11
Brf2Q3UAW9 Gm23055-201ENSMUST00000082805 94 ntBASIC1.9□□□□□ -2.11
Brf2Q3UAW9 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Brf2Q3UAW9 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.9□□□□□ -2.11
Brf2Q3UAW9 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
Brf2Q3UAW9 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Brf2Q3UAW9 Gm22935-201ENSMUST00000103960 104 ntBASIC1.89□□□□□ -2.11
Brf2Q3UAW9 Gm15002-201ENSMUST00000118406 452 ntBASIC1.89□□□□□ -2.11
Brf2Q3UAW9 Gm23214-201ENSMUST00000122716 157 ntBASIC1.89□□□□□ -2.11
Brf2Q3UAW9 Gm22727-201ENSMUST00000158090 116 ntBASIC1.89□□□□□ -2.11
Brf2Q3UAW9 Gm16162-201ENSMUST00000162296 297 ntBASIC1.89□□□□□ -2.11
Brf2Q3UAW9 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
Brf2Q3UAW9 Gm23813-201ENSMUST00000175153 77 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 153.6 ms