Protein–RNA interactions for Protein: Q3U319

Rnf40, E3 ubiquitin-protein ligase BRE1B, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40Q3U319 Gm38071-201ENSMUST00000195792 3378 ntBASIC3.94□□□□□ -1.78
Rnf40Q3U319 Gm24375-201ENSMUST00000104397 132 ntBASIC3.94□□□□□ -1.78
Rnf40Q3U319 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.94□□□□□ -1.78
Rnf40Q3U319 Gm20613-201ENSMUST00000175828 345 ntBASIC3.94□□□□□ -1.78
Rnf40Q3U319 Mir7074-201ENSMUST00000183884 63 ntBASIC3.94□□□□□ -1.78
Rnf40Q3U319 Gm27568-201ENSMUST00000184220 99 ntBASIC3.94□□□□□ -1.78
Rnf40Q3U319 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Rnf40Q3U319 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
Rnf40Q3U319 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Rnf40Q3U319 Gm22545-201ENSMUST00000104350 132 ntBASIC3.93□□□□□ -1.78
Rnf40Q3U319 Mir1927-201ENSMUST00000158579 109 ntBASIC3.93□□□□□ -1.78
Rnf40Q3U319 Snord92-201ENSMUST00000175548 85 ntBASIC3.93□□□□□ -1.78
Rnf40Q3U319 Gm27883-201ENSMUST00000183941 102 ntBASIC3.93□□□□□ -1.78
Rnf40Q3U319 Gm27828-201ENSMUST00000184108 119 ntBASIC3.93□□□□□ -1.78
Rnf40Q3U319 Gm37836-201ENSMUST00000195875 175 ntBASIC3.93□□□□□ -1.78
Rnf40Q3U319 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.93□□□□□ -1.78
Rnf40Q3U319 AC124687.1-201ENSMUST00000221868 189 ntBASIC3.93□□□□□ -1.78
Rnf40Q3U319 mt-Ts2-201ENSMUST00000082416 59 ntBASIC3.93□□□□□ -1.78
Rnf40Q3U319 Snord22-201ENSMUST00000083153 126 ntBASIC3.93□□□□□ -1.78
Rnf40Q3U319 Mir155-201ENSMUST00000083463 65 ntBASIC3.93□□□□□ -1.78
Rnf40Q3U319 Mir34c-201ENSMUST00000083653 77 ntBASIC3.93□□□□□ -1.78
Rnf40Q3U319 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Rnf40Q3U319 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Rnf40Q3U319 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Rnf40Q3U319 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Rnf40Q3U319 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.92□□□□□ -1.78
Rnf40Q3U319 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.92□□□□□ -1.78
Rnf40Q3U319 Gm14881-201ENSMUST00000120366 372 ntBASIC3.92□□□□□ -1.78
Rnf40Q3U319 Gm26476-201ENSMUST00000122618 313 ntBASIC3.92□□□□□ -1.78
Rnf40Q3U319 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.92□□□□□ -1.78
Rnf40Q3U319 Gm26415-201ENSMUST00000157673 292 ntBASIC3.92□□□□□ -1.78
Rnf40Q3U319 Gm23215-201ENSMUST00000178153 121 ntBASIC3.92□□□□□ -1.78
Rnf40Q3U319 Gm37575-201ENSMUST00000195467 309 ntBASIC3.92□□□□□ -1.78
Rnf40Q3U319 Gm43239-201ENSMUST00000200131 201 ntBASIC3.92□□□□□ -1.78
Rnf40Q3U319 AC166341.8-201ENSMUST00000221267 108 ntBASIC3.92□□□□□ -1.78
Rnf40Q3U319 Gm22979-201ENSMUST00000082609 159 ntBASIC3.92□□□□□ -1.78
Rnf40Q3U319 Gm25130-201ENSMUST00000082650 156 ntBASIC3.92□□□□□ -1.78
Rnf40Q3U319 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.92□□□□□ -1.78
Rnf40Q3U319 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Rnf40Q3U319 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Rnf40Q3U319 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Rnf40Q3U319 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Rnf40Q3U319 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
Rnf40Q3U319 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Rnf40Q3U319 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Rnf40Q3U319 Snord66-201ENSMUST00000104051 75 ntBASIC3.91□□□□□ -1.78
Rnf40Q3U319 Gm26367-201ENSMUST00000104165 132 ntBASIC3.91□□□□□ -1.78
Rnf40Q3U319 Gm14709-201ENSMUST00000121225 304 ntBASIC3.91□□□□□ -1.78
Rnf40Q3U319 Gm24911-201ENSMUST00000157292 136 ntBASIC3.91□□□□□ -1.78
Rnf40Q3U319 Gm23257-201ENSMUST00000158322 132 ntBASIC3.91□□□□□ -1.78
Rnf40Q3U319 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Rnf40Q3U319 Mir6402-201ENSMUST00000183406 80 ntBASIC3.91□□□□□ -1.78
Rnf40Q3U319 Gm28282-201ENSMUST00000186072 186 ntBASIC3.91□□□□□ -1.78
Rnf40Q3U319 Gm6947-201ENSMUST00000186254 78 ntBASIC3.91□□□□□ -1.78
Rnf40Q3U319 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC3.91□□□□□ -1.78
Rnf40Q3U319 Gm43901-201ENSMUST00000203247 453 ntBASIC3.91□□□□□ -1.78
Rnf40Q3U319 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.91□□□□□ -1.78
Rnf40Q3U319 Gm22306-201ENSMUST00000082692 107 ntBASIC3.91□□□□□ -1.78
Rnf40Q3U319 Mir30e-201ENSMUST00000083475 92 ntBASIC3.91□□□□□ -1.78
Rnf40Q3U319 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Rnf40Q3U319 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.91□□□□□ -1.78
Rnf40Q3U319 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Rnf40Q3U319 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Rnf40Q3U319 Gm23237-201ENSMUST00000104639 92 ntBASIC3.9□□□□□ -1.79
Rnf40Q3U319 Gm24510-201ENSMUST00000174965 94 ntBASIC3.9□□□□□ -1.79
Rnf40Q3U319 Mir3094-201ENSMUST00000175121 64 ntBASIC3.9□□□□□ -1.79
Rnf40Q3U319 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC3.9□□□□□ -1.79
Rnf40Q3U319 AC154241.1-201ENSMUST00000223952 356 ntBASIC3.9□□□□□ -1.79
Rnf40Q3U319 Gm22283-201ENSMUST00000082556 161 ntBASIC3.9□□□□□ -1.79
Rnf40Q3U319 Mir346-201ENSMUST00000083547 98 ntBASIC3.9□□□□□ -1.79
Rnf40Q3U319 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Rnf40Q3U319 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
Rnf40Q3U319 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.89□□□□□ -1.79
Rnf40Q3U319 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Rnf40Q3U319 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Rnf40Q3U319 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Rnf40Q3U319 Gm26420-201ENSMUST00000104273 103 ntBASIC3.89□□□□□ -1.79
Rnf40Q3U319 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC3.89□□□□□ -1.79
Rnf40Q3U319 Gm23223-201ENSMUST00000158119 127 ntBASIC3.89□□□□□ -1.79
Rnf40Q3U319 Mir6414-201ENSMUST00000183685 82 ntBASIC3.89□□□□□ -1.79
Rnf40Q3U319 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.89□□□□□ -1.79
Rnf40Q3U319 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Rnf40Q3U319 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Rnf40Q3U319 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.89□□□□□ -1.79
Rnf40Q3U319 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Rnf40Q3U319 Gm33962-201ENSMUST00000182643 2592 ntBASIC3.88□□□□□ -1.79
Rnf40Q3U319 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Rnf40Q3U319 Gm22398-201ENSMUST00000174941 125 ntBASIC3.88□□□□□ -1.79
Rnf40Q3U319 Gm25731-201ENSMUST00000175167 125 ntBASIC3.88□□□□□ -1.79
Rnf40Q3U319 Mir5127-201ENSMUST00000175295 71 ntBASIC3.88□□□□□ -1.79
Rnf40Q3U319 Gm24813-201ENSMUST00000175310 84 ntBASIC3.88□□□□□ -1.79
Rnf40Q3U319 Gm13249-201ENSMUST00000177803 345 ntBASIC3.88□□□□□ -1.79
Rnf40Q3U319 Gm13144-201ENSMUST00000179385 345 ntBASIC3.88□□□□□ -1.79
Rnf40Q3U319 Gm42960-201ENSMUST00000202160 241 ntBASIC3.88□□□□□ -1.79
Rnf40Q3U319 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC3.88□□□□□ -1.79
Rnf40Q3U319 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC3.88□□□□□ -1.79
Rnf40Q3U319 AC129085.1-201ENSMUST00000225263 165 ntBASIC3.88□□□□□ -1.79
Rnf40Q3U319 Gm23040-201ENSMUST00000083869 163 ntBASIC3.88□□□□□ -1.79
Rnf40Q3U319 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Rnf40Q3U319 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 113.6 ms