Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Gm28717-201ENSMUST00000189950 315 ntBASIC1.33□□□□□ -2.2
Ctdnep1Q3TP92 Gm19901-201ENSMUST00000192191 495 ntBASIC1.33□□□□□ -2.2
Ctdnep1Q3TP92 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
Ctdnep1Q3TP92 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.33□□□□□ -2.2
Ctdnep1Q3TP92 Gm43583-201ENSMUST00000199235 303 ntBASIC1.33□□□□□ -2.2
Ctdnep1Q3TP92 Mir3087-201ENSMUST00000199405 56 ntBASIC1.33□□□□□ -2.2
Ctdnep1Q3TP92 Gm44564-201ENSMUST00000207985 180 ntBASIC1.33□□□□□ -2.2
Ctdnep1Q3TP92 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC1.33□□□□□ -2.2
Ctdnep1Q3TP92 Snord68-201ENSMUST00000082516 86 ntBASIC1.33□□□□□ -2.2
Ctdnep1Q3TP92 Gm25135-201ENSMUST00000082648 143 ntBASIC1.33□□□□□ -2.2
Ctdnep1Q3TP92 Gm26175-201ENSMUST00000083794 131 ntBASIC1.33□□□□□ -2.2
Ctdnep1Q3TP92 Mir496a-201ENSMUST00000093627 79 ntBASIC1.33□□□□□ -2.2
Ctdnep1Q3TP92 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
Ctdnep1Q3TP92 Gm23142-201ENSMUST00000101848 105 ntBASIC1.32□□□□□ -2.2
Ctdnep1Q3TP92 Gm26240-201ENSMUST00000101893 105 ntBASIC1.32□□□□□ -2.2
Ctdnep1Q3TP92 Mir872-201ENSMUST00000104728 81 ntBASIC1.32□□□□□ -2.2
Ctdnep1Q3TP92 Gm24275-201ENSMUST00000116780 146 ntBASIC1.32□□□□□ -2.2
Ctdnep1Q3TP92 Gm14782-201ENSMUST00000120151 195 ntBASIC1.32□□□□□ -2.2
Ctdnep1Q3TP92 Gm22085-201ENSMUST00000158344 110 ntBASIC1.32□□□□□ -2.2
Ctdnep1Q3TP92 Gm26363-201ENSMUST00000158866 83 ntBASIC1.32□□□□□ -2.2
Ctdnep1Q3TP92 Gm25035-201ENSMUST00000175414 77 ntBASIC1.32□□□□□ -2.2
Ctdnep1Q3TP92 Gm7258-201ENSMUST00000179317 300 ntBASIC1.32□□□□□ -2.2
Ctdnep1Q3TP92 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC1.32□□□□□ -2.2
Ctdnep1Q3TP92 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.32□□□□□ -2.2
Ctdnep1Q3TP92 Gm43884-201ENSMUST00000204251 559 ntBASIC1.32□□□□□ -2.2
Ctdnep1Q3TP92 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC1.32□□□□□ -2.2
Ctdnep1Q3TP92 Gm45116-201ENSMUST00000207392 275 ntBASIC1.32□□□□□ -2.2
Ctdnep1Q3TP92 AC192333.1-201ENSMUST00000224573 376 ntBASIC1.32□□□□□ -2.2
Ctdnep1Q3TP92 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
Ctdnep1Q3TP92 Gm18360-201ENSMUST00000173327 1524 ntBASIC1.31□□□□□ -2.2
Ctdnep1Q3TP92 Mir223-201ENSMUST00000102112 110 ntBASIC1.31□□□□□ -2.2
Ctdnep1Q3TP92 Gm22021-201ENSMUST00000104353 107 ntBASIC1.31□□□□□ -2.2
Ctdnep1Q3TP92 Gm22193-201ENSMUST00000116868 76 ntBASIC1.31□□□□□ -2.2
Ctdnep1Q3TP92 Gm25115-201ENSMUST00000157187 140 ntBASIC1.31□□□□□ -2.2
Ctdnep1Q3TP92 Gm22338-201ENSMUST00000157715 129 ntBASIC1.31□□□□□ -2.2
Ctdnep1Q3TP92 Gm23024-201ENSMUST00000158770 292 ntBASIC1.31□□□□□ -2.2
Ctdnep1Q3TP92 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC1.31□□□□□ -2.2
Ctdnep1Q3TP92 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.31□□□□□ -2.2
Ctdnep1Q3TP92 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.31□□□□□ -2.2
Ctdnep1Q3TP92 Gm28408-201ENSMUST00000191557 463 ntBASIC1.31□□□□□ -2.2
Ctdnep1Q3TP92 Gm26265-202ENSMUST00000196326 133 ntBASIC1.31□□□□□ -2.2
Ctdnep1Q3TP92 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.31□□□□□ -2.2
Ctdnep1Q3TP92 Gm43993-201ENSMUST00000203972 247 ntBASIC1.31□□□□□ -2.2
Ctdnep1Q3TP92 Gm44010-201ENSMUST00000204432 331 ntBASIC1.31□□□□□ -2.2
Ctdnep1Q3TP92 AC154552.7-201ENSMUST00000222824 156 ntBASIC1.31□□□□□ -2.2
Ctdnep1Q3TP92 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
Ctdnep1Q3TP92 Gm23100-201ENSMUST00000083455 141 ntBASIC1.31□□□□□ -2.2
Ctdnep1Q3TP92 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.3□□□□□ -2.2
Ctdnep1Q3TP92 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
Ctdnep1Q3TP92 Gm6829-201ENSMUST00000119858 360 ntBASIC1.3□□□□□ -2.2
Ctdnep1Q3TP92 Gm11254-201ENSMUST00000122368 653 ntBASIC1.3□□□□□ -2.2
Ctdnep1Q3TP92 Gm22217-201ENSMUST00000157556 313 ntBASIC1.3□□□□□ -2.2
Ctdnep1Q3TP92 Snord13-201ENSMUST00000157627 104 ntBASIC1.3□□□□□ -2.2
Ctdnep1Q3TP92 Gm22113-201ENSMUST00000158343 104 ntBASIC1.3□□□□□ -2.2
Ctdnep1Q3TP92 Gm23858-201ENSMUST00000158384 106 ntBASIC1.3□□□□□ -2.2
Ctdnep1Q3TP92 Gm26400-201ENSMUST00000175012 85 ntBASIC1.3□□□□□ -2.2
Ctdnep1Q3TP92 Mir7009-201ENSMUST00000184519 64 ntBASIC1.3□□□□□ -2.2
Ctdnep1Q3TP92 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC1.3□□□□□ -2.2
Ctdnep1Q3TP92 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.3□□□□□ -2.2
Ctdnep1Q3TP92 Mir133a-1-201ENSMUST00000083465 68 ntBASIC1.3□□□□□ -2.2
Ctdnep1Q3TP92 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
Ctdnep1Q3TP92 Gm25541-201ENSMUST00000116888 126 ntBASIC1.29□□□□□ -2.2
Ctdnep1Q3TP92 Gm14980-201ENSMUST00000121247 736 ntBASIC1.29□□□□□ -2.2
Ctdnep1Q3TP92 Gm12785-201ENSMUST00000122052 172 ntBASIC1.29□□□□□ -2.2
Ctdnep1Q3TP92 Gm26255-201ENSMUST00000122492 103 ntBASIC1.29□□□□□ -2.2
Ctdnep1Q3TP92 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.29□□□□□ -2.2
Ctdnep1Q3TP92 Gm22731-201ENSMUST00000158086 94 ntBASIC1.29□□□□□ -2.2
Ctdnep1Q3TP92 Gm22768-201ENSMUST00000158366 153 ntBASIC1.29□□□□□ -2.2
Ctdnep1Q3TP92 Gm22836-201ENSMUST00000158441 61 ntBASIC1.29□□□□□ -2.2
Ctdnep1Q3TP92 Gm26029-201ENSMUST00000158659 132 ntBASIC1.29□□□□□ -2.2
Ctdnep1Q3TP92 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.29□□□□□ -2.2
Ctdnep1Q3TP92 Mir28b-201ENSMUST00000175399 80 ntBASIC1.29□□□□□ -2.2
Ctdnep1Q3TP92 Gm25730-201ENSMUST00000178753 165 ntBASIC1.29□□□□□ -2.2
Ctdnep1Q3TP92 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC1.29□□□□□ -2.2
Ctdnep1Q3TP92 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC1.29□□□□□ -2.2
Ctdnep1Q3TP92 Gm28995-201ENSMUST00000186625 261 ntBASIC1.29□□□□□ -2.2
Ctdnep1Q3TP92 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.29□□□□□ -2.2
Ctdnep1Q3TP92 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC1.29□□□□□ -2.2
Ctdnep1Q3TP92 AC155712.1-201ENSMUST00000219704 160 ntBASIC1.29□□□□□ -2.2
Ctdnep1Q3TP92 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.29□□□□□ -2.2
Ctdnep1Q3TP92 AC100209.2-201ENSMUST00000224461 451 ntBASIC1.29□□□□□ -2.2
Ctdnep1Q3TP92 Gm24765-201ENSMUST00000083691 103 ntBASIC1.29□□□□□ -2.2
Ctdnep1Q3TP92 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
Ctdnep1Q3TP92 Mir1b-201ENSMUST00000117012 122 ntBASIC1.28□□□□□ -2.2
Ctdnep1Q3TP92 Gm13729-201ENSMUST00000120328 406 ntBASIC1.28□□□□□ -2.2
Ctdnep1Q3TP92 Gm11834-201ENSMUST00000122257 585 ntBASIC1.28□□□□□ -2.2
Ctdnep1Q3TP92 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.28□□□□□ -2.2
Ctdnep1Q3TP92 Gm23983-201ENSMUST00000157142 114 ntBASIC1.28□□□□□ -2.2
Ctdnep1Q3TP92 Gm23779-201ENSMUST00000157938 64 ntBASIC1.28□□□□□ -2.2
Ctdnep1Q3TP92 Gm24618-201ENSMUST00000177718 94 ntBASIC1.28□□□□□ -2.2
Ctdnep1Q3TP92 Gm23953-201ENSMUST00000178214 94 ntBASIC1.28□□□□□ -2.2
Ctdnep1Q3TP92 Gm26332-201ENSMUST00000179813 94 ntBASIC1.28□□□□□ -2.2
Ctdnep1Q3TP92 Gm22863-201ENSMUST00000180265 94 ntBASIC1.28□□□□□ -2.2
Ctdnep1Q3TP92 Mir6381-201ENSMUST00000183426 87 ntBASIC1.28□□□□□ -2.2
Ctdnep1Q3TP92 Mir7683-201ENSMUST00000183842 61 ntBASIC1.28□□□□□ -2.2
Ctdnep1Q3TP92 Mir7661-201ENSMUST00000197023 61 ntBASIC1.28□□□□□ -2.2
Ctdnep1Q3TP92 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
Ctdnep1Q3TP92 Gm42960-201ENSMUST00000202160 241 ntBASIC1.28□□□□□ -2.2
Ctdnep1Q3TP92 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC1.28□□□□□ -2.2
Ctdnep1Q3TP92 AC151833.1-201ENSMUST00000227752 574 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 142.8 ms